EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029512 (Gene tree)
Gene ID: 110297712
Gene Symbol: Alkbh6
Alias: Abh6
Full Name: alkB homolog 6
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 5791 bases
Position: chr7:29554381-29560171
Accession: 110297712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0078627	2OG-FeII_Oxy_2	PF13532.6	1.3e-12	1	1
MGP_CAROLIEiJ_P0078628	2OG-FeII_Oxy_2	PF13532.6	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0078634	-	730	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078632	-	1183	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078633	-	427	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078630	-	1102	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078631	-	469	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078636	-	911	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078637	-	545	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078627	-	984	XM_021166652	MGP_CAROLIEiJ_P0078627	238 (aa)	XP_021022311	UPI000A3156D7
MGP_CAROLIEiJ_T0078635	-	761	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0078629	-	824	-	MGP_CAROLIEiJ_P0078629	112 (aa)	-	-
MGP_CAROLIEiJ_T0078628	-	732	-	MGP_CAROLIEiJ_P0078628	215 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029512's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029512's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSG00000239382	ALKBH6	100	90.756	Homo_sapiens
MGP_CAROLIEiJ_G0029512	Alkbh6	100	84.519	ENSAMEG00000000900	ALKBH6	100	84.519	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029512	Alkbh6	94	58.537	ENSACIG00000006337	alkbh6	94	58.296	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.067	ENSAOCG00000023885	alkbh6	95	56.067	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029512	Alkbh6	96	58.515	ENSAPEG00000003934	alkbh6	97	58.515	Amphiprion_percula
MGP_CAROLIEiJ_G0029512	Alkbh6	95	57.080	ENSATEG00000008859	alkbh6	96	57.080	Anabas_testudineus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSANAG00000034195	ALKBH6	89	90.336	Aotus_nancymaae
MGP_CAROLIEiJ_G0029512	Alkbh6	96	59.211	ENSACLG00000001836	alkbh6	96	59.211	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029512	Alkbh6	96	60.262	ENSAMXG00000033280	alkbh6	95	60.262	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSBTAG00000019678	ALKBH6	89	90.756	Bos_taurus
MGP_CAROLIEiJ_G0029512	Alkbh6	94	39.706	WBGene00007202	B0564.2	94	38.496	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.916	ENSCJAG00000043322	ALKBH6	89	89.916	Callithrix_jacchus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.916	ENSCAFG00000006669	ALKBH6	89	89.916	Canis_familiaris
MGP_CAROLIEiJ_G0029512	Alkbh6	100	84.932	ENSCAFG00020018151	ALKBH6	100	81.933	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSCHIG00000015494	ALKBH6	100	90.336	Capra_hircus
MGP_CAROLIEiJ_G0029512	Alkbh6	99	80.841	ENSCAPG00000010410	ALKBH6	96	84.038	Cavia_aperea
MGP_CAROLIEiJ_G0029512	Alkbh6	100	88.655	ENSCPOG00000035954	ALKBH6	100	88.655	Cavia_porcellus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.496	ENSCCAG00000028476	ALKBH6	89	89.496	Cebus_capucinus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSCATG00000029769	ALKBH6	100	90.336	Cercocebus_atys
MGP_CAROLIEiJ_G0029512	Alkbh6	100	87.815	ENSCLAG00000014273	ALKBH6	100	87.815	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.916	ENSCSAG00000004282	ALKBH6	89	89.916	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	61.538	ENSCPBG00000006841	ALKBH6	99	61.538	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029512	Alkbh6	58	51.799	ENSCING00000020875	-	91	51.799	Ciona_intestinalis
MGP_CAROLIEiJ_G0029512	Alkbh6	77	48.851	ENSCSAVG00000006115	-	88	47.778	Ciona_savignyi
MGP_CAROLIEiJ_G0029512	Alkbh6	100	80.672	ENSCANG00000029705	ALKBH6	89	80.672	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	94.538	ENSCGRG00001022841	Alkbh6	100	94.538	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029512	Alkbh6	100	54.132	ENSCSEG00000016413	alkbh6	99	54.132	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029512	Alkbh6	96	56.332	ENSCVAG00000004657	alkbh6	95	56.332	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029512	Alkbh6	97	56.652	ENSDARG00000077253	alkbh6	97	56.652	Danio_rerio
MGP_CAROLIEiJ_G0029512	Alkbh6	100	88.235	ENSDNOG00000033659	ALKBH6	100	88.235	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029512	Alkbh6	94	49.515	FBgn0032259	CG6144	96	48.889	Drosophila_melanogaster
MGP_CAROLIEiJ_G0029512	Alkbh6	63	90.728	ENSETEG00000004833	ALKBH6	88	90.728	Echinops_telfairi
MGP_CAROLIEiJ_G0029512	Alkbh6	98	49.270	ENSEBUG00000002396	alkbh6	99	49.270	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSEASG00005001464	ALKBH6	98	90.756	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	76.987	ENSEEUG00000002238	ALKBH6	92	76.987	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	57.676	ENSELUG00000017352	alkbh6	99	57.676	Esox_lucius
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSFCAG00000006619	ALKBH6	98	90.756	Felis_catus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	86.134	ENSFDAG00000012270	ALKBH6	100	86.134	Fukomys_damarensis
MGP_CAROLIEiJ_G0029512	Alkbh6	94	57.843	ENSGMOG00000020607	alkbh6	99	58.879	Gadus_morhua
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.303	ENSGAFG00000010793	alkbh6	99	56.303	Gambusia_affinis
MGP_CAROLIEiJ_G0029512	Alkbh6	94	57.005	ENSGACG00000002647	alkbh6	99	58.065	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029512	Alkbh6	78	61.628	ENSGAGG00000006766	ALKBH6	81	60.221	Gopherus_agassizii
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSGGOG00000037040	ALKBH6	100	90.336	Gorilla_gorilla
MGP_CAROLIEiJ_G0029512	Alkbh6	96	58.772	ENSHBUG00000023541	alkbh6	97	58.772	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029512	Alkbh6	100	88.655	ENSHGLG00000008091	ALKBH6	100	88.655	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029512	Alkbh6	100	88.655	ENSHGLG00100012062	ALKBH6	100	88.655	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029512	Alkbh6	98	58.298	ENSHCOG00000000308	alkbh6	97	58.298	Hippocampus_comes
MGP_CAROLIEiJ_G0029512	Alkbh6	100	55.649	ENSIPUG00000018672	alkbh6	99	55.649	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSSTOG00000009337	ALKBH6	100	90.756	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029512	Alkbh6	99	88.186	ENSJJAG00000019843	Alkbh6	99	88.186	Jaculus_jaculus
MGP_CAROLIEiJ_G0029512	Alkbh6	97	56.356	ENSKMAG00000003959	alkbh6	99	56.356	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029512	Alkbh6	96	58.798	ENSLBEG00000028172	alkbh6	96	58.798	Labrus_bergylta
MGP_CAROLIEiJ_G0029512	Alkbh6	100	54.286	ENSLACG00000002470	alkbh6	99	54.286	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029512	Alkbh6	99	58.848	ENSLOCG00000014771	alkbh6	99	58.848	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.916	ENSMFAG00000042361	ALKBH6	100	89.916	Macaca_fascicularis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSMMUG00000019700	ALKBH6	100	90.756	Macaca_mulatta
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSMNEG00000032917	ALKBH6	100	90.756	Macaca_nemestrina
MGP_CAROLIEiJ_G0029512	Alkbh6	96	58.515	ENSMAMG00000010698	alkbh6	96	58.515	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029512	Alkbh6	96	59.211	ENSMZEG00005014192	alkbh6	96	59.211	Maylandia_zebra
MGP_CAROLIEiJ_G0029512	Alkbh6	100	94.958	ENSMAUG00000013258	Alkbh6	100	94.958	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	91.176	ENSMICG00000033414	ALKBH6	100	91.176	Microcebus_murinus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	94.958	ENSMOCG00000008724	Alkbh6	100	94.958	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029512	Alkbh6	100	51.429	ENSMMOG00000019353	alkbh6	99	51.429	Mola_mola
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.485	ENSMALG00000003655	-	99	56.485	Monopterus_albus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.067	ENSMALG00000013511	alkbh6	99	56.067	Monopterus_albus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	98.739	ENSMUSG00000042831	Alkbh6	100	98.739	Mus_musculus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	96.639	MGP_PahariEiJ_G0012746	Alkbh6	100	96.639	Mus_pahari
MGP_CAROLIEiJ_G0029512	Alkbh6	100	98.739	MGP_SPRETEiJ_G0030608	Alkbh6	100	98.739	Mus_spretus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.496	ENSMPUG00000005804	ALKBH6	80	89.496	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029512	Alkbh6	99	82.700	ENSMLUG00000030420	ALKBH6	99	82.700	Myotis_lucifugus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	93.697	ENSNGAG00000012659	Alkbh6	94	93.697	Nannospalax_galili
MGP_CAROLIEiJ_G0029512	Alkbh6	96	58.772	ENSNBRG00000018188	alkbh6	96	58.772	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.916	ENSNLEG00000011624	ALKBH6	100	89.916	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029512	Alkbh6	87	73.936	ENSMEUG00000007262	ALKBH6	99	74.112	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029512	Alkbh6	100	88.235	ENSODEG00000015515	ALKBH6	100	88.235	Octodon_degus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	57.143	ENSONIG00000021156	alkbh6	99	57.143	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	91.176	ENSOCUG00000017671	ALKBH6	100	91.176	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029512	Alkbh6	94	59.420	ENSORLG00000015103	alkbh6	92	59.375	Oryzias_latipes
MGP_CAROLIEiJ_G0029512	Alkbh6	100	57.438	ENSORLG00020004747	alkbh6	90	57.438	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029512	Alkbh6	55	66.412	ENSORLG00015006159	alkbh6	91	66.412	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029512	Alkbh6	100	55.785	ENSOMEG00000022075	alkbh6	99	55.785	Oryzias_melastigma
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.496	ENSOGAG00000011490	ALKBH6	89	89.496	Otolemur_garnettii
MGP_CAROLIEiJ_G0029512	Alkbh6	82	91.753	ENSOARG00000005191	ALKBH6	69	91.753	Ovis_aries
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSPPAG00000036802	ALKBH6	100	90.336	Pan_paniscus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	91.176	ENSPPRG00000011495	ALKBH6	89	91.176	Panthera_pardus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSPTRG00000039251	ALKBH6	100	90.336	Pan_troglodytes
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSPANG00000012372	ALKBH6	89	90.336	Papio_anubis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	58.577	ENSPKIG00000015358	alkbh6	100	58.577	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029512	Alkbh6	96	65.517	ENSPSIG00000012465	ALKBH6	82	65.517	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029512	Alkbh6	97	53.448	ENSPMGG00000012259	alkbh6	97	53.448	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	95.378	ENSPEMG00000001920	Alkbh6	100	95.378	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029512	Alkbh6	92	56.540	ENSPMAG00000005422	alkbh6	92	56.223	Petromyzon_marinus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.303	ENSPFOG00000019931	alkbh6	85	56.303	Poecilia_formosa
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.303	ENSPLAG00000001926	alkbh6	85	56.303	Poecilia_latipinna
MGP_CAROLIEiJ_G0029512	Alkbh6	99	58.216	ENSPMEG00000022559	alkbh6	92	59.524	Poecilia_mexicana
MGP_CAROLIEiJ_G0029512	Alkbh6	95	55.066	ENSPREG00000001145	alkbh6	95	59.471	Poecilia_reticulata
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSPPYG00000029809	ALKBH6	88	90.756	Pongo_abelii
MGP_CAROLIEiJ_G0029512	Alkbh6	100	89.496	ENSPCAG00000018829	ALKBH6	89	89.496	Procavia_capensis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSPCOG00000024098	ALKBH6	89	90.336	Propithecus_coquereli
MGP_CAROLIEiJ_G0029512	Alkbh6	87	88.830	ENSPVAG00000024193	ALKBH6	74	88.832	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029512	Alkbh6	96	58.772	ENSPNYG00000011487	alkbh6	96	58.772	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029512	Alkbh6	99	58.750	ENSPNAG00000024220	alkbh6	99	58.750	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029512	Alkbh6	100	96.218	ENSRNOG00000025216	LOC108348106	100	96.218	Rattus_norvegicus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	96.218	ENSRNOG00000047943	Alkbh6	100	96.218	Rattus_norvegicus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	91.176	ENSRBIG00000010440	ALKBH6	100	91.176	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSSBOG00000027983	ALKBH6	89	90.756	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	73.109	ENSSHAG00000010575	ALKBH6	98	73.109	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029512	Alkbh6	96	60.699	ENSSFOG00015005576	alkbh6	99	61.991	Scleropages_formosus
MGP_CAROLIEiJ_G0029512	Alkbh6	94	57.843	ENSSMAG00000016306	alkbh6	93	57.143	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029512	Alkbh6	94	59.314	ENSSDUG00000007406	alkbh6	96	57.965	Seriola_dumerili
MGP_CAROLIEiJ_G0029512	Alkbh6	95	58.407	ENSSLDG00000015256	alkbh6	96	58.407	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	56.067	ENSSLDG00000009873	-	99	56.067	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	59.917	ENSSPUG00000011895	ALKBH6	97	59.917	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029512	Alkbh6	98	58.228	ENSSPAG00000000608	alkbh6	99	58.228	Stegastes_partitus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSSSCG00000002910	ALKBH6	100	90.336	Sus_scrofa
MGP_CAROLIEiJ_G0029512	Alkbh6	100	55.649	ENSTNIG00000002453	alkbh6	99	55.649	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSTTRG00000021443	ALKBH6	89	90.756	Tursiops_truncatus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.756	ENSUAMG00000020580	ALKBH6	91	90.756	Ursus_americanus
MGP_CAROLIEiJ_G0029512	Alkbh6	100	90.336	ENSVVUG00000013636	ALKBH6	100	90.336	Vulpes_vulpes
MGP_CAROLIEiJ_G0029512	Alkbh6	99	60.185	ENSXETG00000002842	alkbh6	96	61.905	Xenopus_tropicalis