EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029587 (Gene tree)
Gene ID: 110299344
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 82304 bases
Position: chr7:34649105-34731408
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0079031	TUDOR	PF00567.24	2e-35	1	2
MGP_CAROLIEiJ_P0079031	TUDOR	PF00567.24	2e-35	2	2
MGP_CAROLIEiJ_P0079032	TUDOR	PF00567.24	6.7e-35	1	2
MGP_CAROLIEiJ_P0079032	TUDOR	PF00567.24	6.7e-35	2	2
MGP_CAROLIEiJ_P0079033	TUDOR	PF00567.24	1.3e-24	1	1
MGP_CAROLIEiJ_P0079036	TUDOR	PF00567.24	2.4e-12	1	1
MGP_CAROLIEiJ_P0079034	TUDOR	PF00567.24	2.7e-12	1	1
MGP_CAROLIEiJ_P0079032	DEAD	PF00270.29	6.8e-07	1	1
MGP_CAROLIEiJ_P0079031	DEAD	PF00270.29	8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0079036	-	782	-	MGP_CAROLIEiJ_P0079036	204 (aa)	-	-
MGP_CAROLIEiJ_T0079035	-	543	-	MGP_CAROLIEiJ_P0079035	127 (aa)	-	-
MGP_CAROLIEiJ_T0079034	-	1412	-	MGP_CAROLIEiJ_P0079034	354 (aa)	-	-
MGP_CAROLIEiJ_T0079033	-	1623	-	MGP_CAROLIEiJ_P0079033	407 (aa)	-	-
MGP_CAROLIEiJ_T0079032	-	3341	-	MGP_CAROLIEiJ_P0079032	1113 (aa)	-	-
MGP_CAROLIEiJ_T0079031	-	3651	-	MGP_CAROLIEiJ_P0079031	1216 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029587's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029587	-	96	37.175	ENSAPOG00000006421	tdrd12	99	37.199	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029587	-	73	82.324	ENSAMEG00000015440	-	99	82.324	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029587	-	89	45.024	ENSACIG00000021652	tdrd12	98	45.024	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029587	-	77	45.810	ENSAOCG00000016463	tdrd12	74	45.810	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029587	-	80	44.883	ENSAPEG00000015105	tdrd12	86	44.883	Amphiprion_percula
MGP_CAROLIEiJ_G0029587	-	84	44.017	ENSATEG00000011608	tdrd12	92	44.017	Anabas_testudineus
MGP_CAROLIEiJ_G0029587	-	94	56.186	ENSAPLG00000011417	-	92	60.000	Anas_platyrhynchos
MGP_CAROLIEiJ_G0029587	-	66	56.207	ENSACAG00000029615	-	87	51.734	Anolis_carolinensis
MGP_CAROLIEiJ_G0029587	-	100	75.664	ENSANAG00000023166	-	99	75.664	Aotus_nancymaae
MGP_CAROLIEiJ_G0029587	-	80	47.438	ENSAMXG00000013811	tdrd12	88	47.438	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029587	-	90	81.522	ENSBTAG00000019266	TDRD12	99	74.398	Bos_taurus
MGP_CAROLIEiJ_G0029587	-	100	75.771	ENSCJAG00000000763	-	99	75.771	Callithrix_jacchus
MGP_CAROLIEiJ_G0029587	-	97	83.249	ENSCAFG00000007505	TDRD12	98	76.642	Canis_familiaris
MGP_CAROLIEiJ_G0029587	-	97	83.249	ENSCAFG00020019790	-	94	79.064	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029587	-	99	76.162	ENSTSYG00000012034	-	99	76.162	Carlito_syrichta
MGP_CAROLIEiJ_G0029587	-	99	79.602	ENSCPOG00000002876	-	99	75.042	Cavia_porcellus
MGP_CAROLIEiJ_G0029587	-	100	72.089	ENSCCAG00000037592	-	99	72.089	Cebus_capucinus
MGP_CAROLIEiJ_G0029587	-	99	70.862	ENSCATG00000038627	-	99	70.862	Cercocebus_atys
MGP_CAROLIEiJ_G0029587	-	99	77.150	ENSCLAG00000012138	-	93	73.853	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029587	-	99	75.966	ENSCSAG00000004794	-	98	75.966	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029587	-	68	91.346	ENSCHOG00000009768	-	53	91.346	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029587	-	97	67.164	ENSCPBG00000000147	-	94	64.583	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029587	-	100	73.288	ENSCANG00000040785	-	99	73.288	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029587	-	98	95.980	ENSCGRG00001021407	-	99	91.133	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029587	-	94	95.312	ENSCGRG00000007286	-	100	88.318	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029587	-	84	41.940	ENSCSEG00000001744	-	74	41.940	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029587	-	61	42.857	ENSCVAG00000004277	tdrd12	96	38.789	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029587	-	85	46.404	ENSDARG00000075217	tdrd12	80	44.353	Danio_rerio
MGP_CAROLIEiJ_G0029587	-	97	81.218	ENSDNOG00000017244	-	92	76.331	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029587	-	97	79.798	ENSDORG00000012134	-	98	74.129	Dipodomys_ordii
MGP_CAROLIEiJ_G0029587	-	71	74.286	ENSETEG00000015088	-	79	74.737	Echinops_telfairi
MGP_CAROLIEiJ_G0029587	-	97	82.234	ENSEASG00005021053	-	98	73.776	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029587	-	88	86.735	ENSEEUG00000008457	-	92	86.735	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029587	-	96	40.654	ENSELUG00000017494	tdrd12	91	44.236	Esox_lucius
MGP_CAROLIEiJ_G0029587	-	99	44.812	ENSFALG00000000259	-	92	43.478	Ficedula_albicollis
MGP_CAROLIEiJ_G0029587	-	99	78.109	ENSFDAG00000014797	-	99	74.523	Fukomys_damarensis
MGP_CAROLIEiJ_G0029587	-	73	46.622	ENSFHEG00000002884	-	56	46.757	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029587	-	94	55.385	ENSGALG00000004704	-	93	55.294	Gallus_gallus
MGP_CAROLIEiJ_G0029587	-	89	41.784	ENSGAFG00000003729	tdrd12	82	41.784	Gambusia_affinis
MGP_CAROLIEiJ_G0029587	-	97	68.159	ENSGAGG00000000247	-	92	67.681	Gopherus_agassizii
MGP_CAROLIEiJ_G0029587	-	100	75.856	ENSGGOG00000011938	-	99	75.856	Gorilla_gorilla
MGP_CAROLIEiJ_G0029587	-	81	46.041	ENSHBUG00000020426	tdrd12	90	46.041	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029587	-	99	81.095	ENSHGLG00000015608	-	100	76.716	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029587	-	95	79.592	ENSHGLG00100008227	-	99	77.413	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029587	-	51	37.143	ENSHCOG00000016160	-	75	47.183	Hippocampus_comes
MGP_CAROLIEiJ_G0029587	-	83	44.613	ENSIPUG00000016825	tdrd12	79	42.584	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029587	-	100	86.765	ENSSTOG00000013638	-	100	80.147	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029587	-	65	45.260	ENSKMAG00000008031	tdrd12	83	45.260	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029587	-	96	38.977	ENSLBEG00000005601	tdrd12	99	38.977	Labrus_bergylta
MGP_CAROLIEiJ_G0029587	-	97	56.311	ENSLACG00000010650	-	99	50.899	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029587	-	86	48.421	ENSLOCG00000001690	tdrd12	79	43.721	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029587	-	94	81.675	ENSLAFG00000008698	-	99	79.638	Loxodonta_africana
MGP_CAROLIEiJ_G0029587	-	100	76.199	ENSMFAG00000044756	-	99	76.199	Macaca_fascicularis
MGP_CAROLIEiJ_G0029587	-	100	76.370	ENSMMUG00000015608	-	99	76.370	Macaca_mulatta
MGP_CAROLIEiJ_G0029587	-	99	76.293	ENSMNEG00000043067	-	99	76.293	Macaca_nemestrina
MGP_CAROLIEiJ_G0029587	-	97	77.665	ENSMLEG00000042036	-	99	70.725	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029587	-	95	39.259	ENSMAMG00000013867	tdrd12	99	39.259	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029587	-	82	45.702	ENSMZEG00005024214	tdrd12	91	45.702	Maylandia_zebra
MGP_CAROLIEiJ_G0029587	-	69	49.883	ENSMGAG00000005627	-	100	56.792	Meleagris_gallopavo
MGP_CAROLIEiJ_G0029587	-	100	86.371	ENSMAUG00000013767	-	100	86.371	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029587	-	97	82.234	ENSMICG00000003623	-	99	78.690	Microcebus_murinus
MGP_CAROLIEiJ_G0029587	-	97	91.371	ENSMOCG00000002366	-	99	88.696	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029587	-	83	43.370	ENSMMOG00000018662	tdrd12	91	43.370	Mola_mola
MGP_CAROLIEiJ_G0029587	-	97	75.635	ENSMODG00000012286	-	92	67.223	Monodelphis_domestica
MGP_CAROLIEiJ_G0029587	-	87	41.784	ENSMALG00000006918	tdrd12	81	43.255	Monopterus_albus
MGP_CAROLIEiJ_G0029587	-	100	95.098	MGP_PahariEiJ_G0012821	-	100	95.098	Mus_pahari
MGP_CAROLIEiJ_G0029587	-	100	97.215	MGP_SPRETEiJ_G0030686	-	100	97.215	Mus_spretus
MGP_CAROLIEiJ_G0029587	-	97	80.203	ENSMPUG00000007791	-	92	73.816	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029587	-	97	81.726	ENSMLUG00000010694	-	99	79.027	Myotis_lucifugus
MGP_CAROLIEiJ_G0029587	-	100	87.745	ENSNGAG00000000793	-	99	82.254	Nannospalax_galili
MGP_CAROLIEiJ_G0029587	-	65	43.015	ENSNBRG00000017878	-	95	44.868	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029587	-	100	71.966	ENSNLEG00000007635	-	99	71.966	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029587	-	63	84.177	ENSMEUG00000014059	-	60	84.177	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029587	-	97	72.081	ENSOPRG00000015809	-	93	70.298	Ochotona_princeps
MGP_CAROLIEiJ_G0029587	-	99	80.597	ENSODEG00000014443	-	100	73.239	Octodon_degus
MGP_CAROLIEiJ_G0029587	-	96	41.446	ENSONIG00000010630	tdrd12	100	41.629	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029587	-	94	68.912	ENSOANG00000029442	-	99	60.993	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029587	-	97	80.711	ENSOCUG00000016911	-	98	78.057	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029587	-	79	42.774	ENSORLG00000027859	tdrd12	78	41.769	Oryzias_latipes
MGP_CAROLIEiJ_G0029587	-	85	45.277	ENSORLG00015020835	tdrd12	70	45.277	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029587	-	81	43.149	ENSOMEG00000021862	tdrd12	87	43.149	Oryzias_melastigma
MGP_CAROLIEiJ_G0029587	-	97	80.203	ENSOGAG00000001571	-	99	80.961	Otolemur_garnettii
MGP_CAROLIEiJ_G0029587	-	99	81.491	ENSOARG00000004254	-	92	78.343	Ovis_aries
MGP_CAROLIEiJ_G0029587	-	97	77.157	ENSPPAG00000042284	-	99	73.689	Pan_paniscus
MGP_CAROLIEiJ_G0029587	-	97	82.234	ENSPPRG00000002389	-	99	76.817	Panthera_pardus
MGP_CAROLIEiJ_G0029587	-	100	73.031	ENSPTRG00000010795	TDRD12	99	73.054	Pan_troglodytes
MGP_CAROLIEiJ_G0029587	-	89	88.614	ENSPANG00000001203	-	93	88.614	Papio_anubis
MGP_CAROLIEiJ_G0029587	-	99	45.619	ENSPKIG00000006407	tdrd12	86	45.983	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029587	-	94	68.878	ENSPSIG00000012970	-	100	66.500	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029587	-	83	43.733	ENSPMGG00000022691	tdrd12	92	43.733	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029587	-	98	94.975	ENSPEMG00000009233	-	100	90.461	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029587	-	93	75.132	ENSPCIG00000020993	-	92	65.280	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029587	-	84	43.893	ENSPFOG00000008184	tdrd12	76	41.784	Poecilia_formosa
MGP_CAROLIEiJ_G0029587	-	74	42.384	ENSPMEG00000006420	tdrd12	92	45.276	Poecilia_mexicana
MGP_CAROLIEiJ_G0029587	-	76	44.233	ENSPREG00000004916	tdrd12	76	44.233	Poecilia_reticulata
MGP_CAROLIEiJ_G0029587	-	100	76.027	ENSPPYG00000009821	-	97	76.027	Pongo_abelii
MGP_CAROLIEiJ_G0029587	-	93	77.895	ENSPCAG00000013510	-	85	70.155	Procavia_capensis
MGP_CAROLIEiJ_G0029587	-	100	73.408	ENSPCOG00000023600	-	99	73.408	Propithecus_coquereli
MGP_CAROLIEiJ_G0029587	-	90	91.237	ENSPVAG00000014599	-	90	91.237	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029587	-	81	46.041	ENSPNYG00000022866	tdrd12	88	46.041	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029587	-	80	45.809	ENSPNAG00000003413	tdrd12	85	45.809	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029587	-	100	92.264	ENSRNOG00000012719	Tdrd12	94	92.264	Rattus_norvegicus
MGP_CAROLIEiJ_G0029587	-	99	71.080	ENSRBIG00000019899	-	99	71.080	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029587	-	100	75.856	ENSRROG00000036351	-	99	75.856	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029587	-	100	75.428	ENSSBOG00000034916	-	99	75.428	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029587	-	97	76.263	ENSSHAG00000002599	-	99	68.284	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029587	-	81	45.455	ENSSFOG00015000297	tdrd12	83	45.161	Scleropages_formosus
MGP_CAROLIEiJ_G0029587	-	96	39.309	ENSSMAG00000002870	tdrd12	99	39.309	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029587	-	80	45.468	ENSSDUG00000017304	tdrd12	88	45.468	Seriola_dumerili
MGP_CAROLIEiJ_G0029587	-	80	44.591	ENSSLDG00000004415	tdrd12	88	44.591	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029587	-	94	81.250	ENSSARG00000005357	-	91	83.228	Sorex_araneus
MGP_CAROLIEiJ_G0029587	-	94	61.658	ENSSPUG00000013174	-	90	61.538	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029587	-	68	56.522	ENSSPAG00000005706	tdrd12	79	56.522	Stegastes_partitus
MGP_CAROLIEiJ_G0029587	-	86	76.626	ENSSSCG00000002857	-	96	76.626	Sus_scrofa
MGP_CAROLIEiJ_G0029587	-	59	50.302	ENSTGUG00000009121	-	100	52.124	Taeniopygia_guttata
MGP_CAROLIEiJ_G0029587	-	81	40.000	ENSTRUG00000021888	tdrd12	92	40.000	Takifugu_rubripes
MGP_CAROLIEiJ_G0029587	-	77	41.139	ENSTNIG00000000465	-	73	44.595	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029587	-	75	86.355	ENSTBEG00000007609	-	76	86.355	Tupaia_belangeri
MGP_CAROLIEiJ_G0029587	-	96	79.636	ENSTTRG00000012206	-	99	79.636	Tursiops_truncatus
MGP_CAROLIEiJ_G0029587	-	99	77.125	ENSUAMG00000007298	-	96	77.125	Ursus_americanus
MGP_CAROLIEiJ_G0029587	-	99	77.038	ENSUMAG00000014314	-	96	77.038	Ursus_maritimus
MGP_CAROLIEiJ_G0029587	-	97	72.589	ENSVPAG00000012051	-	100	70.537	Vicugna_pacos
MGP_CAROLIEiJ_G0029587	-	97	83.249	ENSVVUG00000016637	-	90	79.244	Vulpes_vulpes
MGP_CAROLIEiJ_G0029587	-	70	43.039	ENSXETG00000031945	-	98	42.808	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029587	-	83	45.215	ENSXMAG00000020908	tdrd12	92	45.215	Xiphophorus_maculatus