EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029600 (Gene tree)
Gene ID: 110298243
Gene Symbol: Pop4
Alias: 1110023P21Rik|Rpp29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 9453 bases
Position: chr7:37470030-37479482
Accession: 110298243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0079107	UPF0086	PF01868.16	1.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0079110	-	800	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0079111	-	586	-	MGP_CAROLIEiJ_P0079111	81 (aa)	-	-
MGP_CAROLIEiJ_T0079112	-	721	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0079109	-	793	-	MGP_CAROLIEiJ_P0079109	66 (aa)	-	-
MGP_CAROLIEiJ_T0079108	-	892	-	MGP_CAROLIEiJ_P0079108	81 (aa)	-	-
MGP_CAROLIEiJ_T0079107	-	2109	-	MGP_CAROLIEiJ_P0079107	221 (aa)	XP_021023027	UPI000A3199AD

Gene Model

Click here to download MGP_CAROLIEiJ_G0029600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029600's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029600	Pop4	100	82.353	ENSG00000105171	POP4	100	91.667	Homo_sapiens
MGP_CAROLIEiJ_G0029600	Pop4	97	72.685	ENSAMEG00000003172	-	97	72.685	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029600	Pop4	99	79.909	ENSAMEG00000018329	-	99	79.909	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029600	Pop4	93	60.976	ENSACIG00000008358	pop4	97	60.976	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029600	Pop4	89	65.000	ENSAOCG00000010116	pop4	96	64.467	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029600	Pop4	92	62.500	ENSAPEG00000002829	pop4	86	62.255	Amphiprion_percula
MGP_CAROLIEiJ_G0029600	Pop4	92	63.725	ENSATEG00000013028	pop4	92	62.745	Anabas_testudineus
MGP_CAROLIEiJ_G0029600	Pop4	90	72.727	ENSAPLG00000014051	POP4	98	71.921	Anas_platyrhynchos
MGP_CAROLIEiJ_G0029600	Pop4	100	82.805	ENSANAG00000020295	POP4	100	82.805	Aotus_nancymaae
MGP_CAROLIEiJ_G0029600	Pop4	92	61.084	ENSACLG00000000526	pop4	91	61.084	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029600	Pop4	100	59.276	ENSAMXG00000002899	pop4	100	59.729	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	ENSBTAG00000002223	POP4	100	84.163	Bos_taurus
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSCJAG00000046750	POP4	100	86.111	Callithrix_jacchus
MGP_CAROLIEiJ_G0029600	Pop4	83	84.153	ENSCAFG00000007630	POP4	100	83.060	Canis_familiaris
MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	ENSCHIG00000016743	POP4	100	83.258	Capra_hircus
MGP_CAROLIEiJ_G0029600	Pop4	100	82.805	ENSTSYG00000003488	POP4	100	81.900	Carlito_syrichta
MGP_CAROLIEiJ_G0029600	Pop4	99	62.844	ENSCAPG00000011105	POP4	99	63.134	Cavia_aperea
MGP_CAROLIEiJ_G0029600	Pop4	100	84.615	ENSCPOG00000002992	POP4	100	84.615	Cavia_porcellus
MGP_CAROLIEiJ_G0029600	Pop4	100	72.398	ENSCCAG00000034244	-	100	71.946	Cebus_capucinus
MGP_CAROLIEiJ_G0029600	Pop4	100	83.710	ENSCCAG00000020285	-	100	82.353	Cebus_capucinus
MGP_CAROLIEiJ_G0029600	Pop4	100	83.710	ENSCATG00000036022	POP4	100	93.750	Cercocebus_atys
MGP_CAROLIEiJ_G0029600	Pop4	100	84.615	ENSCLAG00000013162	POP4	100	83.710	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029600	Pop4	99	83.105	ENSCSAG00000004868	POP4	100	83.105	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029600	Pop4	99	62.844	ENSCHOG00000002071	POP4	100	61.927	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029600	Pop4	100	69.683	ENSCPBG00000016132	POP4	100	69.683	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029600	Pop4	84	32.461	ENSCING00000023871	-	94	32.487	Ciona_intestinalis
MGP_CAROLIEiJ_G0029600	Pop4	90	84.925	ENSCANG00000005924	POP4	98	84.925	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029600	Pop4	100	91.855	ENSCGRG00001017185	Pop4	100	91.403	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029600	Pop4	100	91.855	ENSCGRG00000008155	Pop4	100	91.403	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029600	Pop4	92	55.392	ENSCSEG00000002946	pop4	92	55.392	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029600	Pop4	89	46.701	ENSCVAG00000018602	POP4	85	44.388	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029600	Pop4	88	64.500	ENSDARG00000101472	pop4	88	65.128	Danio_rerio
MGP_CAROLIEiJ_G0029600	Pop4	100	82.805	ENSDNOG00000047663	POP4	88	81.900	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029600	Pop4	78	81.395	ENSDORG00000008577	Pop4	99	80.814	Dipodomys_ordii
MGP_CAROLIEiJ_G0029600	Pop4	86	32.836	FBgn0035831	CG8038	96	32.338	Drosophila_melanogaster
MGP_CAROLIEiJ_G0029600	Pop4	98	68.203	ENSETEG00000003607	POP4	99	67.742	Echinops_telfairi
MGP_CAROLIEiJ_G0029600	Pop4	91	48.624	ENSEBUG00000010447	pop4	83	49.065	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029600	Pop4	100	42.616	ENSEBUG00000004305	pop4	100	42.918	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029600	Pop4	100	45.946	ENSEBUG00000008575	pop4	100	45.495	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029600	Pop4	100	82.692	ENSECAG00000020206	POP4	78	82.692	Equus_caballus
MGP_CAROLIEiJ_G0029600	Pop4	90	61.111	ENSEEUG00000013109	POP4	99	61.111	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029600	Pop4	88	63.590	ENSELUG00000019812	pop4	88	64.103	Esox_lucius
MGP_CAROLIEiJ_G0029600	Pop4	100	81.900	ENSFCAG00000001619	POP4	100	82.353	Felis_catus
MGP_CAROLIEiJ_G0029600	Pop4	98	68.203	ENSFALG00000000206	POP4	96	67.742	Ficedula_albicollis
MGP_CAROLIEiJ_G0029600	Pop4	100	85.068	ENSFDAG00000017859	POP4	100	84.163	Fukomys_damarensis
MGP_CAROLIEiJ_G0029600	Pop4	90	57.000	ENSFHEG00000012745	pop4	90	56.000	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029600	Pop4	90	61.809	ENSGMOG00000000335	pop4	98	60.804	Gadus_morhua
MGP_CAROLIEiJ_G0029600	Pop4	100	65.611	ENSGALG00000041972	POP4	92	65.611	Gallus_gallus
MGP_CAROLIEiJ_G0029600	Pop4	79	54.237	ENSGAFG00000003571	pop4	98	54.237	Gambusia_affinis
MGP_CAROLIEiJ_G0029600	Pop4	92	59.903	ENSGACG00000014510	pop4	98	63.889	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029600	Pop4	100	70.136	ENSGAGG00000024544	POP4	79	70.588	Gopherus_agassizii
MGP_CAROLIEiJ_G0029600	Pop4	99	82.648	ENSGGOG00000038346	POP4	99	82.648	Gorilla_gorilla
MGP_CAROLIEiJ_G0029600	Pop4	92	61.084	ENSHBUG00000021821	pop4	91	61.084	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029600	Pop4	99	86.301	ENSHGLG00000015798	POP4	99	85.388	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029600	Pop4	100	85.973	ENSHGLG00100009737	POP4	100	85.068	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029600	Pop4	89	65.816	ENSHCOG00000020937	pop4	88	65.816	Hippocampus_comes
MGP_CAROLIEiJ_G0029600	Pop4	100	57.466	ENSIPUG00000013652	pop4	100	57.466	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029600	Pop4	100	85.520	ENSSTOG00000011016	POP4	100	84.615	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029600	Pop4	100	86.878	ENSJJAG00000013376	Pop4	100	85.973	Jaculus_jaculus
MGP_CAROLIEiJ_G0029600	Pop4	99	61.607	ENSKMAG00000012250	pop4	99	61.818	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029600	Pop4	99	57.207	ENSLBEG00000014139	pop4	99	57.466	Labrus_bergylta
MGP_CAROLIEiJ_G0029600	Pop4	99	56.757	ENSLBEG00000018846	-	99	57.014	Labrus_bergylta
MGP_CAROLIEiJ_G0029600	Pop4	99	63.303	ENSLACG00000008581	POP4	98	63.303	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029600	Pop4	100	64.706	ENSLOCG00000005597	pop4	100	65.766	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSLAFG00000000084	POP4	100	83.258	Loxodonta_africana
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSMFAG00000029606	POP4	100	83.258	Macaca_fascicularis
MGP_CAROLIEiJ_G0029600	Pop4	100	83.710	ENSMMUG00000017424	POP4	100	83.710	Macaca_mulatta
MGP_CAROLIEiJ_G0029600	Pop4	100	83.710	ENSMNEG00000031374	POP4	100	83.710	Macaca_nemestrina
MGP_CAROLIEiJ_G0029600	Pop4	100	83.710	ENSMLEG00000043454	POP4	100	82.805	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029600	Pop4	85	67.021	ENSMAMG00000011716	pop4	92	63.636	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029600	Pop4	92	61.084	ENSMZEG00005002360	pop4	91	61.084	Maylandia_zebra
MGP_CAROLIEiJ_G0029600	Pop4	99	65.753	ENSMGAG00000005337	POP4	97	65.297	Meleagris_gallopavo
MGP_CAROLIEiJ_G0029600	Pop4	100	90.950	ENSMAUG00000020110	Pop4	100	89.593	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029600	Pop4	99	79.909	ENSMICG00000035730	POP4	98	78.995	Microcebus_murinus
MGP_CAROLIEiJ_G0029600	Pop4	99	60.000	ENSMMOG00000015321	pop4	99	60.000	Mola_mola
MGP_CAROLIEiJ_G0029600	Pop4	99	77.982	ENSMODG00000029406	POP4	94	76.606	Monodelphis_domestica
MGP_CAROLIEiJ_G0029600	Pop4	94	63.942	ENSMALG00000012571	pop4	94	63.942	Monopterus_albus
MGP_CAROLIEiJ_G0029600	Pop4	100	98.643	ENSMUSG00000030423	Pop4	100	98.643	Mus_musculus
MGP_CAROLIEiJ_G0029600	Pop4	100	98.643	MGP_SPRETEiJ_G0030699	Pop4	100	98.643	Mus_spretus
MGP_CAROLIEiJ_G0029600	Pop4	100	70.721	ENSMPUG00000008063	-	100	70.721	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029600	Pop4	100	81.900	ENSMPUG00000008041	-	100	80.995	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029600	Pop4	99	63.182	ENSMLUG00000010774	POP4	99	62.727	Myotis_lucifugus
MGP_CAROLIEiJ_G0029600	Pop4	57	82.400	ENSMEUG00000003636	-	100	82.400	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029600	Pop4	90	87.500	ENSOPRG00000004736	POP4	99	87.500	Ochotona_princeps
MGP_CAROLIEiJ_G0029600	Pop4	99	84.932	ENSODEG00000013025	POP4	100	84.977	Octodon_degus
MGP_CAROLIEiJ_G0029600	Pop4	92	60.591	ENSONIG00000003458	pop4	90	60.591	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	ENSOCUG00000015974	POP4	100	84.163	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029600	Pop4	90	60.294	ENSORLG00000020317	pop4	92	59.314	Oryzias_latipes
MGP_CAROLIEiJ_G0029600	Pop4	92	59.024	ENSORLG00015011624	pop4	91	58.333	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029600	Pop4	90	63.000	ENSOMEG00000002538	pop4	89	61.809	Oryzias_melastigma
MGP_CAROLIEiJ_G0029600	Pop4	99	84.018	ENSOGAG00000011168	POP4	99	83.105	Otolemur_garnettii
MGP_CAROLIEiJ_G0029600	Pop4	100	83.784	ENSOARG00000004041	POP4	100	82.883	Ovis_aries
MGP_CAROLIEiJ_G0029600	Pop4	100	82.805	ENSPPAG00000040372	POP4	100	82.805	Pan_paniscus
MGP_CAROLIEiJ_G0029600	Pop4	100	81.900	ENSPPRG00000010502	POP4	100	82.353	Panthera_pardus
MGP_CAROLIEiJ_G0029600	Pop4	100	81.900	ENSPTIG00000016598	POP4	100	82.353	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029600	Pop4	100	82.805	ENSPTRG00000010779	POP4	100	82.805	Pan_troglodytes
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSPANG00000008546	POP4	100	83.258	Papio_anubis
MGP_CAROLIEiJ_G0029600	Pop4	89	67.172	ENSPKIG00000004468	pop4	87	67.172	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029600	Pop4	100	71.041	ENSPSIG00000015690	POP4	98	75.879	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0029600	Pop4	90	57.143	ENSPMGG00000008608	pop4	97	57.635	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029600	Pop4	99	75.799	ENSPEMG00000019982	-	100	75.799	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029600	Pop4	100	91.403	ENSPEMG00000014034	-	96	90.045	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029600	Pop4	66	66.207	ENSPMAG00000006265	pop4	73	66.207	Petromyzon_marinus
MGP_CAROLIEiJ_G0029600	Pop4	100	78.281	ENSPCIG00000024738	POP4	95	77.376	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029600	Pop4	89	62.245	ENSPFOG00000000925	pop4	88	62.245	Poecilia_formosa
MGP_CAROLIEiJ_G0029600	Pop4	89	62.245	ENSPLAG00000003161	pop4	88	62.245	Poecilia_latipinna
MGP_CAROLIEiJ_G0029600	Pop4	89	62.245	ENSPMEG00000002475	pop4	88	62.245	Poecilia_mexicana
MGP_CAROLIEiJ_G0029600	Pop4	92	60.099	ENSPREG00000022403	pop4	88	60.099	Poecilia_reticulata
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSPPYG00000009805	POP4	100	83.258	Pongo_abelii
MGP_CAROLIEiJ_G0029600	Pop4	99	75.000	ENSPCAG00000007737	POP4	99	75.000	Procavia_capensis
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSPCOG00000018055	POP4	100	82.353	Propithecus_coquereli
MGP_CAROLIEiJ_G0029600	Pop4	100	80.090	ENSPVAG00000006069	POP4	100	79.638	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029600	Pop4	92	61.084	ENSPNYG00000020038	pop4	91	61.084	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029600	Pop4	88	65.641	ENSPNAG00000005591	pop4	88	65.641	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029600	Pop4	100	95.928	ENSRNOG00000027646	Pop4	100	95.928	Rattus_norvegicus
MGP_CAROLIEiJ_G0029600	Pop4	80	80.114	ENSRBIG00000044769	POP4	89	82.734	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029600	Pop4	100	83.258	ENSRROG00000028903	POP4	100	83.258	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029600	Pop4	57	34.532	YBR257W	-	50	34.532	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	ENSSBOG00000032445	POP4	100	82.805	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029600	Pop4	98	76.959	ENSSHAG00000016888	POP4	98	75.576	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029600	Pop4	92	65.025	ENSSFOG00015014556	pop4	90	64.532	Scleropages_formosus
MGP_CAROLIEiJ_G0029600	Pop4	90	64.824	ENSSMAG00000016611	pop4	93	64.322	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029600	Pop4	92	62.255	ENSSDUG00000019865	pop4	82	61.275	Seriola_dumerili
MGP_CAROLIEiJ_G0029600	Pop4	96	61.215	ENSSLDG00000001763	pop4	92	60.280	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029600	Pop4	98	85.714	ENSSARG00000004748	POP4	99	85.253	Sorex_araneus
MGP_CAROLIEiJ_G0029600	Pop4	99	61.538	ENSSPAG00000014364	pop4	98	60.909	Stegastes_partitus
MGP_CAROLIEiJ_G0029600	Pop4	100	84.615	ENSSSCG00000002854	POP4	100	84.615	Sus_scrofa
MGP_CAROLIEiJ_G0029600	Pop4	90	72.362	ENSTGUG00000008953	POP4	99	71.859	Taeniopygia_guttata
MGP_CAROLIEiJ_G0029600	Pop4	92	60.680	ENSTNIG00000006401	pop4	100	59.606	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029600	Pop4	100	84.163	ENSTBEG00000002194	POP4	100	84.163	Tupaia_belangeri
MGP_CAROLIEiJ_G0029600	Pop4	100	81.448	ENSTTRG00000005882	POP4	100	81.448	Tursiops_truncatus
MGP_CAROLIEiJ_G0029600	Pop4	100	80.995	ENSUAMG00000003049	-	100	80.090	Ursus_americanus
MGP_CAROLIEiJ_G0029600	Pop4	100	80.995	ENSUMAG00000007522	-	100	80.090	Ursus_maritimus
MGP_CAROLIEiJ_G0029600	Pop4	92	82.759	ENSVVUG00000016876	-	71	81.773	Vulpes_vulpes
MGP_CAROLIEiJ_G0029600	Pop4	98	67.742	ENSXETG00000017598	pop4	98	67.742	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029600	Pop4	92	61.463	ENSXCOG00000017695	pop4	88	61.463	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0029600	Pop4	92	61.463	ENSXMAG00000013862	pop4	88	61.463	Xiphophorus_maculatus