EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029860 (Gene tree)
Gene ID: 110299412
Gene Symbol: Chd2
Alias: 2810013C04Rik|2810040A01Rik|5630401D06Rik
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 114035 bases
Position: chr7:75937597-76051631
Accession: 110299412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0080106	ResIII	PF04851.15	9.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0080114	-	558	-	MGP_CAROLIEiJ_P0080114	74 (aa)	-	-
MGP_CAROLIEiJ_T0080115	-	360	-	MGP_CAROLIEiJ_P0080115	120 (aa)	-	-
MGP_CAROLIEiJ_T0080116	-	1571	-	MGP_CAROLIEiJ_P0080116	333 (aa)	-	-
MGP_CAROLIEiJ_T0080117	-	1633	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080110	-	687	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080106	-	9104	XM_021169095	MGP_CAROLIEiJ_P0080106	1826 (aa)	XP_021024754	UPI000A314E79
MGP_CAROLIEiJ_T0080112	-	339	-	MGP_CAROLIEiJ_P0080112	112 (aa)	-	-
MGP_CAROLIEiJ_T0080113	-	389	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080109	-	667	-	MGP_CAROLIEiJ_P0080109	35 (aa)	-	UPI000268AE5F
MGP_CAROLIEiJ_T0080108	-	487	-	MGP_CAROLIEiJ_P0080108	162 (aa)	-	-
MGP_CAROLIEiJ_T0080118	-	754	-	MGP_CAROLIEiJ_P0080118	178 (aa)	-	-
MGP_CAROLIEiJ_T0080119	-	896	-	MGP_CAROLIEiJ_P0080119	57 (aa)	-	UPI0006644D3F
MGP_CAROLIEiJ_T0080120	-	3767	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080121	-	1201	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080107	-	5308	-	MGP_CAROLIEiJ_P0080107	219 (aa)	-	-
MGP_CAROLIEiJ_T0080122	-	1385	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080111	-	582	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029860	Chd2	88	60.988	MGP_CAROLIEiJ_G0021099	Chd1	95	65.552
MGP_CAROLIEiJ_G0029860	Chd2	63	32.861	MGP_CAROLIEiJ_G0024604	Chd6	61	37.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029860	Chd2	100	96.718	ENSG00000173575	CHD2	100	97.143	Homo_sapiens
MGP_CAROLIEiJ_G0029860	Chd2	96	72.717	ENSAPOG00000008913	chd2	100	72.312	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029860	Chd2	63	97.656	ENSAMEG00000010805	-	100	97.656	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029860	Chd2	96	70.387	ENSAOCG00000016332	chd2	100	70.075	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029860	Chd2	96	72.686	ENSAPEG00000016676	chd2	100	72.228	Amphiprion_percula
MGP_CAROLIEiJ_G0029860	Chd2	96	72.157	ENSATEG00000005246	chd2	100	71.805	Anabas_testudineus
MGP_CAROLIEiJ_G0029860	Chd2	100	87.228	ENSAPLG00000011141	-	100	87.228	Anas_platyrhynchos
MGP_CAROLIEiJ_G0029860	Chd2	98	80.452	ENSACAG00000000088	-	99	79.859	Anolis_carolinensis
MGP_CAROLIEiJ_G0029860	Chd2	100	96.716	ENSANAG00000024017	-	100	96.716	Aotus_nancymaae
MGP_CAROLIEiJ_G0029860	Chd2	100	96.661	ENSCJAG00000020444	-	100	96.661	Callithrix_jacchus
MGP_CAROLIEiJ_G0029860	Chd2	99	96.624	ENSCAFG00000010998	CHD2	100	97.172	Canis_familiaris
MGP_CAROLIEiJ_G0029860	Chd2	99	94.014	ENSCHIG00000022261	-	99	94.664	Capra_hircus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.606	ENSTSYG00000003272	-	100	96.606	Carlito_syrichta
MGP_CAROLIEiJ_G0029860	Chd2	93	95.871	ENSCPOG00000005800	-	100	95.871	Cavia_porcellus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.716	ENSCCAG00000035304	-	100	96.716	Cebus_capucinus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.663	ENSCATG00000031069	-	100	96.663	Cercocebus_atys
MGP_CAROLIEiJ_G0029860	Chd2	100	95.733	ENSCLAG00000016269	-	100	95.733	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029860	Chd2	100	96.718	ENSCSAG00000017007	-	100	96.718	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029860	Chd2	78	94.545	ENSCHOG00000000608	-	81	94.545	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029860	Chd2	81	87.467	ENSCPBG00000018049	-	95	91.559	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029860	Chd2	74	54.269	ENSCSAVG00000007580	-	93	60.105	Ciona_savignyi
MGP_CAROLIEiJ_G0029860	Chd2	100	96.608	ENSCANG00000038126	-	100	96.608	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029860	Chd2	100	97.920	ENSCGRG00001006649	Chd2	100	97.920	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029860	Chd2	100	97.920	ENSCGRG00000018154	Chd2	100	97.920	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029860	Chd2	98	63.884	ENSCSEG00000003646	chd2	93	66.316	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029860	Chd2	100	64.125	ENSCVAG00000002427	chd2	99	71.071	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029860	Chd2	96	70.462	ENSDARG00000060687	chd2	100	72.120	Danio_rerio
MGP_CAROLIEiJ_G0029860	Chd2	99	95.897	ENSDNOG00000009796	-	100	95.897	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029860	Chd2	50	75.532	ENSEBUG00000014994	chd2	83	75.532	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029860	Chd2	99	96.350	ENSEASG00005015526	-	99	97.917	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029860	Chd2	95	72.100	ENSELUG00000017981	chd2	100	71.053	Esox_lucius
MGP_CAROLIEiJ_G0029860	Chd2	100	88.520	ENSFALG00000010369	-	100	88.520	Ficedula_albicollis
MGP_CAROLIEiJ_G0029860	Chd2	100	95.733	ENSFDAG00000020651	-	100	95.733	Fukomys_damarensis
MGP_CAROLIEiJ_G0029860	Chd2	88	71.411	ENSFHEG00000002119	chd2	91	71.613	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029860	Chd2	94	68.862	ENSGMOG00000002890	chd2	99	70.323	Gadus_morhua
MGP_CAROLIEiJ_G0029860	Chd2	100	87.459	ENSGALG00000006949	CHD2	100	87.459	Gallus_gallus
MGP_CAROLIEiJ_G0029860	Chd2	96	70.192	ENSGAFG00000001905	chd2	97	69.818	Gambusia_affinis
MGP_CAROLIEiJ_G0029860	Chd2	91	70.599	ENSGACG00000013246	chd2	99	70.080	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029860	Chd2	80	89.854	ENSGAGG00000013176	-	95	97.753	Gopherus_agassizii
MGP_CAROLIEiJ_G0029860	Chd2	100	95.295	ENSGGOG00000015677	CHD2	100	95.295	Gorilla_gorilla
MGP_CAROLIEiJ_G0029860	Chd2	96	72.835	ENSHBUG00000017947	chd2	100	72.183	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029860	Chd2	100	95.569	ENSHGLG00000004435	CHD2	100	95.569	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029860	Chd2	100	94.912	ENSHGLG00100016376	-	100	94.912	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029860	Chd2	98	68.030	ENSHCOG00000008855	chd2	98	67.126	Hippocampus_comes
MGP_CAROLIEiJ_G0029860	Chd2	72	74.431	ENSIPUG00000000488	chd2	100	69.167	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.608	ENSSTOG00000001270	-	100	96.608	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.114	ENSJJAG00000000213	Chd2	100	96.114	Jaculus_jaculus
MGP_CAROLIEiJ_G0029860	Chd2	84	72.763	ENSKMAG00000015849	chd2	99	73.735	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029860	Chd2	76	96.229	ENSLAFG00000016885	-	100	96.229	Loxodonta_africana
MGP_CAROLIEiJ_G0029860	Chd2	100	96.772	ENSMFAG00000033343	-	100	96.772	Macaca_fascicularis
MGP_CAROLIEiJ_G0029860	Chd2	100	96.772	ENSMMUG00000011782	-	100	96.772	Macaca_mulatta
MGP_CAROLIEiJ_G0029860	Chd2	100	96.393	ENSMNEG00000036875	-	100	96.393	Macaca_nemestrina
MGP_CAROLIEiJ_G0029860	Chd2	100	96.718	ENSMLEG00000035026	-	100	96.718	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029860	Chd2	96	72.051	ENSMAMG00000009082	chd2	100	71.145	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029860	Chd2	99	87.479	ENSMGAG00000008966	-	99	87.431	Meleagris_gallopavo
MGP_CAROLIEiJ_G0029860	Chd2	100	95.019	ENSMICG00000000332	-	99	95.996	Microcebus_murinus
MGP_CAROLIEiJ_G0029860	Chd2	100	97.757	ENSMOCG00000015124	Chd2	100	97.757	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029860	Chd2	100	91.072	ENSMODG00000013158	-	100	91.236	Monodelphis_domestica
MGP_CAROLIEiJ_G0029860	Chd2	100	99.398	ENSMUSG00000078671	Chd2	100	99.398	Mus_musculus
MGP_CAROLIEiJ_G0029860	Chd2	100	98.961	MGP_PahariEiJ_G0013082	Chd2	100	98.961	Mus_pahari
MGP_CAROLIEiJ_G0029860	Chd2	100	99.507	MGP_SPRETEiJ_G0030962	Chd2	100	99.507	Mus_spretus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.552	ENSMPUG00000017577	-	100	96.552	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029860	Chd2	100	93.702	ENSMLUG00000009292	-	100	93.702	Myotis_lucifugus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.825	ENSNGAG00000010792	Chd2	100	96.825	Nannospalax_galili
MGP_CAROLIEiJ_G0029860	Chd2	100	94.147	ENSNLEG00000012349	-	100	93.928	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029860	Chd2	71	88.390	ENSMEUG00000001522	-	77	88.346	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029860	Chd2	100	94.967	ENSODEG00000016028	-	100	94.967	Octodon_degus
MGP_CAROLIEiJ_G0029860	Chd2	96	72.697	ENSONIG00000015136	chd2	100	72.267	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029860	Chd2	88	81.908	ENSOANG00000004385	-	100	81.908	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029860	Chd2	100	85.917	ENSOCUG00000001628	-	99	96.796	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029860	Chd2	96	71.991	ENSORLG00000008403	chd2	100	71.183	Oryzias_latipes
MGP_CAROLIEiJ_G0029860	Chd2	96	72.185	ENSORLG00020004138	chd2	100	71.367	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029860	Chd2	100	64.013	ENSOMEG00000005831	chd2	100	65.194	Oryzias_melastigma
MGP_CAROLIEiJ_G0029860	Chd2	100	94.365	ENSOGAG00000010399	-	100	94.365	Otolemur_garnettii
MGP_CAROLIEiJ_G0029860	Chd2	99	95.640	ENSOARG00000010343	-	100	94.475	Ovis_aries
MGP_CAROLIEiJ_G0029860	Chd2	100	95.740	ENSPPAG00000030381	-	100	95.740	Pan_paniscus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.718	ENSPTRG00000007478	CHD2	100	96.718	Pan_troglodytes
MGP_CAROLIEiJ_G0029860	Chd2	100	93.818	ENSPANG00000033355	-	100	93.818	Papio_anubis
MGP_CAROLIEiJ_G0029860	Chd2	99	70.275	ENSPKIG00000000495	chd2	100	72.153	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029860	Chd2	84	69.878	ENSPMGG00000009941	chd2	99	70.373	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029860	Chd2	100	97.865	ENSPEMG00000019507	Chd2	100	97.865	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029860	Chd2	91	91.856	ENSPCIG00000009417	-	100	90.892	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029860	Chd2	96	72.661	ENSPFOG00000007050	chd2	100	72.159	Poecilia_formosa
MGP_CAROLIEiJ_G0029860	Chd2	96	72.941	ENSPLAG00000005067	chd2	100	72.429	Poecilia_latipinna
MGP_CAROLIEiJ_G0029860	Chd2	96	72.717	ENSPMEG00000019628	chd2	100	72.213	Poecilia_mexicana
MGP_CAROLIEiJ_G0029860	Chd2	100	95.405	ENSPPYG00000006799	-	100	95.405	Pongo_abelii
MGP_CAROLIEiJ_G0029860	Chd2	100	96.663	ENSPCOG00000028084	-	100	96.663	Propithecus_coquereli
MGP_CAROLIEiJ_G0029860	Chd2	68	73.600	ENSPNAG00000016719	chd2	99	69.652	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029860	Chd2	100	98.084	ENSRNOG00000012716	Chd2	100	98.084	Rattus_norvegicus
MGP_CAROLIEiJ_G0029860	Chd2	100	94.642	ENSRBIG00000036875	-	100	94.642	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029860	Chd2	100	96.663	ENSRROG00000041087	-	100	96.663	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029860	Chd2	100	96.771	ENSSBOG00000023754	-	100	96.771	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029860	Chd2	100	91.236	ENSSHAG00000012513	-	100	91.453	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029860	Chd2	100	73.139	ENSSFOG00015023759	chd2	100	73.193	Scleropages_formosus
MGP_CAROLIEiJ_G0029860	Chd2	96	71.404	ENSSMAG00000001726	chd2	100	70.677	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029860	Chd2	96	70.862	ENSSLDG00000001146	chd2	100	71.160	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029860	Chd2	77	96.667	ENSSARG00000014112	-	82	96.667	Sorex_araneus
MGP_CAROLIEiJ_G0029860	Chd2	99	83.398	ENSSPUG00000011266	-	99	83.343	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029860	Chd2	96	71.364	ENSSPAG00000016452	chd2	100	71.209	Stegastes_partitus
MGP_CAROLIEiJ_G0029860	Chd2	100	96.499	ENSSSCG00000002266	-	100	96.648	Sus_scrofa
MGP_CAROLIEiJ_G0029860	Chd2	100	88.325	ENSTGUG00000008540	-	100	88.325	Taeniopygia_guttata
MGP_CAROLIEiJ_G0029860	Chd2	83	68.722	ENSTRUG00000008842	chd2	87	67.987	Takifugu_rubripes
MGP_CAROLIEiJ_G0029860	Chd2	86	73.323	ENSTNIG00000010760	chd2	97	73.008	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029860	Chd2	77	96.476	ENSTBEG00000017730	-	83	96.476	Tupaia_belangeri
MGP_CAROLIEiJ_G0029860	Chd2	96	93.636	ENSTTRG00000000430	-	90	95.316	Tursiops_truncatus
MGP_CAROLIEiJ_G0029860	Chd2	100	93.979	ENSUMAG00000000083	-	100	93.979	Ursus_maritimus
MGP_CAROLIEiJ_G0029860	Chd2	86	94.545	ENSVPAG00000009645	-	86	97.473	Vicugna_pacos
MGP_CAROLIEiJ_G0029860	Chd2	89	74.523	ENSXETG00000024129	chd2	73	81.036	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029860	Chd2	96	69.479	ENSXCOG00000020255	chd2	99	69.596	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0029860	Chd2	96	72.926	ENSXMAG00000002707	chd2	100	72.213	Xiphophorus_maculatus