EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029873 (Gene tree)
Gene ID: 110298311
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 6969 bases
Position: chr7:81466097-81473065
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0080191	RNase_T	PF00929.24	6.2e-17	1	1
MGP_CAROLIEiJ_P0080193	RNase_T	PF00929.24	6.2e-17	1	1
MGP_CAROLIEiJ_P0080195	RNase_T	PF00929.24	6.2e-17	1	1
MGP_CAROLIEiJ_P0080196	RNase_T	PF00929.24	3.2e-12	1	1
MGP_CAROLIEiJ_P0080192	RNase_T	PF00929.24	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0080194	-	810	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080195	-	828	-	MGP_CAROLIEiJ_P0080195	181 (aa)	-	-
MGP_CAROLIEiJ_T0080196	-	835	-	MGP_CAROLIEiJ_P0080196	145 (aa)	-	-
MGP_CAROLIEiJ_T0080191	-	705	-	MGP_CAROLIEiJ_P0080191	181 (aa)	-	-
MGP_CAROLIEiJ_T0080192	-	1095	-	MGP_CAROLIEiJ_P0080192	301 (aa)	-	-
MGP_CAROLIEiJ_T0080193	-	1062	-	MGP_CAROLIEiJ_P0080193	181 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029873's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0029873	-	94	56.934	MGP_CAROLIEiJ_G0029872	Aen	68	56.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029873	-	99	83.333	ENSG00000172183	ISG20	100	81.215	Homo_sapiens
MGP_CAROLIEiJ_G0029873	-	100	69.655	ENSAMEG00000012803	ISG20	100	70.760	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029873	-	94	50.725	ENSACIG00000012040	isg20	71	47.414	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029873	-	87	39.264	ENSACAG00000013905	-	59	38.788	Anolis_carolinensis
MGP_CAROLIEiJ_G0029873	-	99	72.222	ENSBTAG00000014762	ISG20	100	70.760	Bos_taurus
MGP_CAROLIEiJ_G0029873	-	99	79.861	ENSCJAG00000034923	ISG20	100	78.453	Callithrix_jacchus
MGP_CAROLIEiJ_G0029873	-	99	74.306	ENSCAFG00000011525	ISG20	100	72.515	Canis_familiaris
MGP_CAROLIEiJ_G0029873	-	99	74.825	ENSCAFG00020018837	ISG20	100	72.515	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029873	-	99	72.222	ENSCHIG00000014526	ISG20	100	70.760	Capra_hircus
MGP_CAROLIEiJ_G0029873	-	99	79.167	ENSTSYG00000030528	ISG20	97	77.143	Carlito_syrichta
MGP_CAROLIEiJ_G0029873	-	99	75.000	ENSCAPG00000011672	ISG20	100	73.481	Cavia_aperea
MGP_CAROLIEiJ_G0029873	-	99	75.000	ENSCPOG00000036489	ISG20	100	72.928	Cavia_porcellus
MGP_CAROLIEiJ_G0029873	-	99	80.556	ENSCCAG00000025395	ISG20	100	78.453	Cebus_capucinus
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSCATG00000042494	ISG20	100	79.558	Cercocebus_atys
MGP_CAROLIEiJ_G0029873	-	99	76.389	ENSCLAG00000008100	ISG20	100	74.033	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029873	-	99	82.639	ENSCSAG00000017194	ISG20	100	80.110	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029873	-	94	38.028	ENSCING00000004431	-	81	40.123	Ciona_intestinalis
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSCANG00000032616	ISG20	100	80.110	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029873	-	99	86.014	ENSCGRG00001016300	-	98	86.014	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029873	-	99	85.417	ENSCGRG00000000609	-	99	84.615	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029873	-	90	50.000	ENSCVAG00000009300	isg20	76	50.311	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0029873	-	94	45.985	ENSDARG00000102266	isg20l2	53	47.368	Danio_rerio
MGP_CAROLIEiJ_G0029873	-	99	71.329	ENSDNOG00000049229	ISG20	99	67.778	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029873	-	95	49.640	ENSEBUG00000009658	-	84	47.429	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029873	-	94	45.985	ENSEBUG00000010461	ISG20	56	48.734	Eptatretus_burgeri
MGP_CAROLIEiJ_G0029873	-	99	74.306	ENSEASG00005015360	ISG20	99	75.148	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029873	-	99	74.306	ENSECAG00000019499	ISG20	99	75.148	Equus_caballus
MGP_CAROLIEiJ_G0029873	-	99	71.528	ENSFCAG00000005151	ISG20	100	71.345	Felis_catus
MGP_CAROLIEiJ_G0029873	-	99	75.694	ENSFDAG00000007444	ISG20	100	74.033	Fukomys_damarensis
MGP_CAROLIEiJ_G0029873	-	87	49.686	ENSFHEG00000018658	isg20	70	44.167	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029873	-	94	45.652	ENSGMOG00000001258	isg20	73	46.541	Gadus_morhua
MGP_CAROLIEiJ_G0029873	-	94	49.635	ENSGALG00000044204	ISG20	63	50.633	Gallus_gallus
MGP_CAROLIEiJ_G0029873	-	94	50.725	ENSGAFG00000005685	isg20	72	52.174	Gambusia_affinis
MGP_CAROLIEiJ_G0029873	-	95	48.201	ENSGACG00000007047	isg20	50	50.000	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029873	-	99	56.944	ENSGAGG00000013542	ISG20	96	56.287	Gopherus_agassizii
MGP_CAROLIEiJ_G0029873	-	99	83.333	ENSGGOG00000010365	ISG20	100	81.215	Gorilla_gorilla
MGP_CAROLIEiJ_G0029873	-	99	76.389	ENSHGLG00000009077	ISG20	100	75.138	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029873	-	99	76.389	ENSHGLG00100005004	ISG20	100	75.138	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0029873	-	98	44.444	ENSHCOG00000013913	isg20l2	82	43.709	Hippocampus_comes
MGP_CAROLIEiJ_G0029873	-	99	79.167	ENSSTOG00000020467	ISG20	97	78.857	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029873	-	99	79.167	ENSJJAG00000010531	-	96	79.769	Jaculus_jaculus
MGP_CAROLIEiJ_G0029873	-	94	48.905	ENSLACG00000018339	-	56	50.000	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029873	-	95	49.640	ENSLOCG00000014240	isg20	73	49.693	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSMFAG00000032331	ISG20	100	79.558	Macaca_fascicularis
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSMMUG00000007669	ISG20	100	79.558	Macaca_mulatta
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSMNEG00000030310	ISG20	100	79.558	Macaca_nemestrina
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSMLEG00000038761	ISG20	100	79.558	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029873	-	99	84.028	ENSMAUG00000015001	-	99	82.967	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029873	-	99	79.861	ENSMICG00000027508	ISG20	100	78.363	Microcebus_murinus
MGP_CAROLIEiJ_G0029873	-	99	79.330	ENSMOCG00000005940	-	100	79.330	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029873	-	94	47.101	ENSMMOG00000019013	isg20	77	56.000	Mola_mola
MGP_CAROLIEiJ_G0029873	-	96	64.748	ENSMODG00000019583	ISG20	93	66.463	Monodelphis_domestica
MGP_CAROLIEiJ_G0029873	-	100	99.448	ENSMUSG00000039236	Isg20	100	99.448	Mus_musculus
MGP_CAROLIEiJ_G0029873	-	100	97.241	MGP_PahariEiJ_G0013095	-	100	97.241	Mus_pahari
MGP_CAROLIEiJ_G0029873	-	100	98.895	MGP_SPRETEiJ_G0030975	-	100	98.895	Mus_spretus
MGP_CAROLIEiJ_G0029873	-	99	64.336	ENSMPUG00000015816	ISG20	100	66.082	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029873	-	99	86.806	ENSNGAG00000019782	-	99	86.857	Nannospalax_galili
MGP_CAROLIEiJ_G0029873	-	91	79.268	ENSNLEG00000033379	ISG20	100	79.268	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029873	-	99	74.306	ENSODEG00000015032	ISG20	97	73.143	Octodon_degus
MGP_CAROLIEiJ_G0029873	-	97	45.390	ENSONIG00000001534	isg20l2	89	47.561	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029873	-	99	64.583	ENSOANG00000006380	ISG20	79	64.138	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029873	-	99	77.083	ENSOCUG00000023346	ISG20	100	75.691	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029873	-	95	48.921	ENSORLG00000029585	isg20	77	50.000	Oryzias_latipes
MGP_CAROLIEiJ_G0029873	-	95	49.640	ENSORLG00015016089	isg20	71	49.704	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029873	-	95	48.201	ENSOMEG00000003990	isg20	95	48.521	Oryzias_melastigma
MGP_CAROLIEiJ_G0029873	-	99	80.556	ENSOGAG00000004742	ISG20	100	78.947	Otolemur_garnettii
MGP_CAROLIEiJ_G0029873	-	96	60.345	ENSOARG00000010964	ISG20	95	60.345	Ovis_aries
MGP_CAROLIEiJ_G0029873	-	99	83.217	ENSPPAG00000028868	ISG20	100	80.110	Pan_paniscus
MGP_CAROLIEiJ_G0029873	-	99	72.222	ENSPPRG00000023560	ISG20	100	72.515	Panthera_pardus
MGP_CAROLIEiJ_G0029873	-	92	75.940	ENSPTIG00000018498	ISG20	71	73.913	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029873	-	99	83.333	ENSPTRG00000044668	ISG20	100	81.215	Pan_troglodytes
MGP_CAROLIEiJ_G0029873	-	99	81.250	ENSPANG00000034658	ISG20	100	79.006	Papio_anubis
MGP_CAROLIEiJ_G0029873	-	99	44.521	ENSPMGG00000021232	isg20	78	49.057	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029873	-	99	86.806	ENSPEMG00000020302	-	99	84.066	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029873	-	99	46.897	ENSPMAG00000001569	ISG20	91	47.619	Petromyzon_marinus
MGP_CAROLIEiJ_G0029873	-	93	47.059	ENSPMAG00000000577	isg20	87	46.541	Petromyzon_marinus
MGP_CAROLIEiJ_G0029873	-	96	63.309	ENSPCIG00000006405	ISG20	89	64.458	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029873	-	94	51.449	ENSPLAG00000005932	isg20	78	51.299	Poecilia_latipinna
MGP_CAROLIEiJ_G0029873	-	94	51.449	ENSPMEG00000016899	isg20	72	52.795	Poecilia_mexicana
MGP_CAROLIEiJ_G0029873	-	86	50.400	ENSPREG00000005954	isg20	64	51.079	Poecilia_reticulata
MGP_CAROLIEiJ_G0029873	-	99	82.639	ENSPPYG00000006756	ISG20	100	80.663	Pongo_abelii
MGP_CAROLIEiJ_G0029873	-	99	78.472	ENSPCOG00000015727	ISG20	97	78.107	Propithecus_coquereli
MGP_CAROLIEiJ_G0029873	-	94	47.518	ENSPNAG00000022301	isg20	51	41.026	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029873	-	99	89.130	ENSRNOG00000054561	Isg20	99	91.813	Rattus_norvegicus
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSRBIG00000041506	ISG20	100	80.110	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029873	-	99	81.944	ENSRROG00000043326	ISG20	100	80.110	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029873	-	99	80.556	ENSSBOG00000031539	ISG20	100	77.348	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029873	-	96	64.748	ENSSHAG00000017049	ISG20	97	65.060	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029873	-	94	49.275	ENSSMAG00000004520	isg20	50	50.943	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029873	-	99	61.806	ENSSPUG00000012061	ISG20	97	61.677	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029873	-	99	75.000	ENSSSCG00000024867	ISG20	100	73.099	Sus_scrofa
MGP_CAROLIEiJ_G0029873	-	98	45.833	ENSTRUG00000021768	isg20l2	51	49.091	Takifugu_rubripes
MGP_CAROLIEiJ_G0029873	-	90	50.382	ENSTNIG00000010389	isg20	75	51.316	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029873	-	99	71.329	ENSUAMG00000019065	ISG20	97	71.528	Ursus_americanus
MGP_CAROLIEiJ_G0029873	-	99	72.222	ENSVVUG00000012013	ISG20	100	71.930	Vulpes_vulpes
MGP_CAROLIEiJ_G0029873	-	94	52.555	ENSXETG00000007588	aen	62	53.165	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029873	-	94	51.449	ENSXMAG00000013066	isg20	51	52.795	Xiphophorus_maculatus