EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0029907 (Gene tree)
Gene ID: 110298490
Gene Symbol: Blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 80988 bases
Position: chr7:83020436-83101423
Accession: 110298490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0080393	HRDC	PF00570.23	8.1e-12	1	1
MGP_CAROLIEiJ_P0080394	HRDC	PF00570.23	8.2e-12	1	1
MGP_CAROLIEiJ_P0080394	BDHCT	PF08072.11	4.2e-22	1	1
MGP_CAROLIEiJ_P0080393	BDHCT	PF08072.11	4.3e-22	1	1
MGP_CAROLIEiJ_P0080394	DEAD	PF00270.29	6.2e-20	1	1
MGP_CAROLIEiJ_P0080393	DEAD	PF00270.29	6.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0080398	-	460	-	MGP_CAROLIEiJ_P0080398	48 (aa)	-	-
MGP_CAROLIEiJ_T0080399	-	3544	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080400	-	2479	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080392	-	993	-	MGP_CAROLIEiJ_P0080392	154 (aa)	-	-
MGP_CAROLIEiJ_T0080393	-	4578	XM_021167779	MGP_CAROLIEiJ_P0080393	1409 (aa)	XP_021023438	UPI000A31A17B
MGP_CAROLIEiJ_T0080401	-	747	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080396	-	485	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080397	-	394	-	MGP_CAROLIEiJ_P0080397	45 (aa)	-	-
MGP_CAROLIEiJ_T0080394	-	4757	-	MGP_CAROLIEiJ_P0080394	1412 (aa)	-	-
MGP_CAROLIEiJ_T0080395	-	539	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0029907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0029907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0029907	Blm	100	75.053	ENSG00000197299	BLM	100	75.526	Homo_sapiens
MGP_CAROLIEiJ_G0029907	Blm	59	60.947	ENSAPOG00000017966	blm	88	61.137	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0029907	Blm	100	74.598	ENSAMEG00000013843	BLM	100	75.017	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0029907	Blm	59	61.876	ENSACIG00000023762	blm	60	61.910	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0029907	Blm	59	61.511	ENSAOCG00000003318	blm	60	61.910	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0029907	Blm	59	61.584	ENSAPEG00000018105	blm	59	61.584	Amphiprion_percula
MGP_CAROLIEiJ_G0029907	Blm	55	66.117	ENSATEG00000006421	blm	57	65.776	Anabas_testudineus
MGP_CAROLIEiJ_G0029907	Blm	81	56.845	ENSAPLG00000006878	BLM	98	56.750	Anas_platyrhynchos
MGP_CAROLIEiJ_G0029907	Blm	58	69.886	ENSACAG00000014275	BLM	84	69.886	Anolis_carolinensis
MGP_CAROLIEiJ_G0029907	Blm	100	74.209	ENSANAG00000038415	BLM	100	74.474	Aotus_nancymaae
MGP_CAROLIEiJ_G0029907	Blm	88	62.134	ENSACLG00000020354	blm	86	62.544	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0029907	Blm	58	64.706	ENSAMXG00000016970	blm	88	61.672	Astyanax_mexicanus
MGP_CAROLIEiJ_G0029907	Blm	93	77.632	ENSBTAG00000020301	BLM	100	78.289	Bos_taurus
MGP_CAROLIEiJ_G0029907	Blm	100	73.999	ENSCJAG00000009803	BLM	100	74.420	Callithrix_jacchus
MGP_CAROLIEiJ_G0029907	Blm	100	74.175	ENSCAFG00000012385	BLM	100	73.525	Canis_familiaris
MGP_CAROLIEiJ_G0029907	Blm	100	74.105	ENSCAFG00020016111	BLM	92	88.115	Canis_lupus_dingo
MGP_CAROLIEiJ_G0029907	Blm	100	74.087	ENSCHIG00000010329	BLM	100	77.303	Capra_hircus
MGP_CAROLIEiJ_G0029907	Blm	100	74.702	ENSTSYG00000012368	BLM	100	75.193	Carlito_syrichta
MGP_CAROLIEiJ_G0029907	Blm	88	82.684	ENSCAPG00000017976	BLM	99	81.674	Cavia_aperea
MGP_CAROLIEiJ_G0029907	Blm	100	73.179	ENSCPOG00000001761	BLM	100	72.899	Cavia_porcellus
MGP_CAROLIEiJ_G0029907	Blm	100	73.418	ENSCCAG00000023069	BLM	100	73.840	Cebus_capucinus
MGP_CAROLIEiJ_G0029907	Blm	100	74.772	ENSCATG00000040609	BLM	92	91.105	Cercocebus_atys
MGP_CAROLIEiJ_G0029907	Blm	100	74.982	ENSCLAG00000012111	BLM	100	74.982	Chinchilla_lanigera
MGP_CAROLIEiJ_G0029907	Blm	100	74.214	ENSCSAG00000017040	BLM	100	74.983	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0029907	Blm	91	73.474	ENSCHOG00000006255	BLM	93	73.474	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0029907	Blm	84	56.327	ENSCPBG00000025000	BLM	88	72.841	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0029907	Blm	89	64.884	ENSCANG00000034808	BLM	100	65.682	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0029907	Blm	100	84.158	ENSCGRG00001024897	Blm	100	84.300	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0029907	Blm	68	80.167	ENSCGRG00000016261	Blm	97	80.376	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0029907	Blm	55	65.090	ENSCSEG00000013483	blm	60	65.045	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0029907	Blm	84	65.443	ENSDARG00000077089	blm	72	79.024	Danio_rerio
MGP_CAROLIEiJ_G0029907	Blm	99	71.269	ENSDNOG00000010159	BLM	99	71.399	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0029907	Blm	73	80.326	ENSDORG00000011033	Blm	100	80.134	Dipodomys_ordii
MGP_CAROLIEiJ_G0029907	Blm	55	41.221	FBgn0002906	Blm	51	41.485	Drosophila_melanogaster
MGP_CAROLIEiJ_G0029907	Blm	79	80.833	ENSETEG00000015019	BLM	85	63.658	Echinops_telfairi
MGP_CAROLIEiJ_G0029907	Blm	100	73.150	ENSEASG00005006727	BLM	100	73.150	Equus_asinus_asinus
MGP_CAROLIEiJ_G0029907	Blm	100	74.653	ENSECAG00000011405	BLM	100	74.722	Equus_caballus
MGP_CAROLIEiJ_G0029907	Blm	98	69.950	ENSEEUG00000001434	BLM	98	69.446	Erinaceus_europaeus
MGP_CAROLIEiJ_G0029907	Blm	63	66.456	ENSELUG00000019098	blm	58	69.848	Esox_lucius
MGP_CAROLIEiJ_G0029907	Blm	100	72.969	ENSFCAG00000006087	BLM	100	72.899	Felis_catus
MGP_CAROLIEiJ_G0029907	Blm	75	57.313	ENSFALG00000010981	BLM	86	66.505	Ficedula_albicollis
MGP_CAROLIEiJ_G0029907	Blm	100	70.189	ENSFDAG00000012658	BLM	100	70.119	Fukomys_damarensis
MGP_CAROLIEiJ_G0029907	Blm	59	62.127	ENSFHEG00000002553	blm	60	62.127	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0029907	Blm	100	44.291	ENSGMOG00000016431	blm	90	60.000	Gadus_morhua
MGP_CAROLIEiJ_G0029907	Blm	99	49.831	ENSGALG00000008256	BLM	87	67.056	Gallus_gallus
MGP_CAROLIEiJ_G0029907	Blm	55	64.987	ENSGAFG00000001117	blm	59	65.161	Gambusia_affinis
MGP_CAROLIEiJ_G0029907	Blm	85	64.917	ENSGACG00000010863	blm	100	73.004	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0029907	Blm	64	62.555	ENSGAGG00000005383	BLM	82	76.129	Gopherus_agassizii
MGP_CAROLIEiJ_G0029907	Blm	100	74.772	ENSGGOG00000007710	BLM	92	91.644	Gorilla_gorilla
MGP_CAROLIEiJ_G0029907	Blm	59	62.251	ENSHBUG00000015943	blm	60	62.588	Haplochromis_burtoni
MGP_CAROLIEiJ_G0029907	Blm	100	75.229	ENSHGLG00000013231	BLM	99	75.492	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0029907	Blm	73	54.458	ENSHCOG00000011455	blm	83	61.337	Hippocampus_comes
MGP_CAROLIEiJ_G0029907	Blm	74	55.429	ENSIPUG00000000529	blm	68	66.067	Ictalurus_punctatus
MGP_CAROLIEiJ_G0029907	Blm	100	75.843	ENSSTOG00000005000	BLM	100	76.227	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0029907	Blm	66	87.184	ENSJJAG00000016322	Blm	94	87.184	Jaculus_jaculus
MGP_CAROLIEiJ_G0029907	Blm	62	62.588	ENSKMAG00000016608	blm	59	62.915	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0029907	Blm	59	67.991	ENSLACG00000006490	BLM	58	67.407	Latimeria_chalumnae
MGP_CAROLIEiJ_G0029907	Blm	88	63.059	ENSLOCG00000014302	blm	89	63.146	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0029907	Blm	100	74.631	ENSMFAG00000042982	BLM	92	91.375	Macaca_fascicularis
MGP_CAROLIEiJ_G0029907	Blm	100	74.631	ENSMMUG00000019526	BLM	92	91.375	Macaca_mulatta
MGP_CAROLIEiJ_G0029907	Blm	98	73.381	ENSMNEG00000031251	BLM	92	91.105	Macaca_nemestrina
MGP_CAROLIEiJ_G0029907	Blm	100	72.171	ENSMLEG00000032934	BLM	100	72.382	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0029907	Blm	60	62.911	ENSMAMG00000008726	blm	61	63.498	Mastacembelus_armatus
MGP_CAROLIEiJ_G0029907	Blm	89	62.470	ENSMZEG00005022323	blm	72	62.456	Maylandia_zebra
MGP_CAROLIEiJ_G0029907	Blm	100	84.225	ENSMAUG00000008953	Blm	99	83.978	Mesocricetus_auratus
MGP_CAROLIEiJ_G0029907	Blm	100	74.877	ENSMICG00000034442	BLM	100	74.649	Microcebus_murinus
MGP_CAROLIEiJ_G0029907	Blm	100	82.452	ENSMOCG00000016367	Blm	100	82.311	Microtus_ochrogaster
MGP_CAROLIEiJ_G0029907	Blm	99	61.062	ENSMODG00000019449	BLM	99	61.350	Monodelphis_domestica
MGP_CAROLIEiJ_G0029907	Blm	68	63.121	ENSMALG00000007323	blm	88	62.766	Monopterus_albus
MGP_CAROLIEiJ_G0029907	Blm	100	95.983	ENSMUSG00000030528	Blm	100	95.983	Mus_musculus
MGP_CAROLIEiJ_G0029907	Blm	100	94.255	MGP_PahariEiJ_G0013129	Blm	100	94.113	Mus_pahari
MGP_CAROLIEiJ_G0029907	Blm	100	96.116	MGP_SPRETEiJ_G0031009	Blm	100	96.116	Mus_spretus
MGP_CAROLIEiJ_G0029907	Blm	84	72.218	ENSMPUG00000015657	BLM	99	72.712	Mustela_putorius_furo
MGP_CAROLIEiJ_G0029907	Blm	100	73.047	ENSMLUG00000014697	BLM	100	72.855	Myotis_lucifugus
MGP_CAROLIEiJ_G0029907	Blm	100	80.780	ENSNGAG00000001275	Blm	100	80.780	Nannospalax_galili
MGP_CAROLIEiJ_G0029907	Blm	89	62.470	ENSNBRG00000019702	blm	88	62.456	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0029907	Blm	100	73.371	ENSNLEG00000012087	BLM	100	79.866	Nomascus_leucogenys
MGP_CAROLIEiJ_G0029907	Blm	99	58.584	ENSMEUG00000007253	BLM	99	58.865	Notamacropus_eugenii
MGP_CAROLIEiJ_G0029907	Blm	95	85.062	ENSOPRG00000011667	BLM	95	84.924	Ochotona_princeps
MGP_CAROLIEiJ_G0029907	Blm	73	76.894	ENSODEG00000015373	BLM	100	76.960	Octodon_degus
MGP_CAROLIEiJ_G0029907	Blm	88	62.293	ENSONIG00000015193	blm	89	62.339	Oreochromis_niloticus
MGP_CAROLIEiJ_G0029907	Blm	53	80.208	ENSOANG00000009316	-	99	80.026	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0029907	Blm	99	70.968	ENSOCUG00000013969	BLM	99	70.168	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0029907	Blm	88	62.901	ENSORLG00000008110	blm	71	62.972	Oryzias_latipes
MGP_CAROLIEiJ_G0029907	Blm	65	63.139	ENSORLG00020004812	blm	71	63.227	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0029907	Blm	74	63.258	ENSORLG00015018640	blm	78	65.557	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0029907	Blm	70	61.730	ENSOMEG00000023545	blm	60	61.922	Oryzias_melastigma
MGP_CAROLIEiJ_G0029907	Blm	100	70.667	ENSOGAG00000005708	BLM	100	70.435	Otolemur_garnettii
MGP_CAROLIEiJ_G0029907	Blm	100	73.556	ENSOARG00000012875	BLM	100	73.904	Ovis_aries
MGP_CAROLIEiJ_G0029907	Blm	100	75.053	ENSPPAG00000032173	BLM	100	75.526	Pan_paniscus
MGP_CAROLIEiJ_G0029907	Blm	100	73.179	ENSPPRG00000002471	BLM	100	73.039	Panthera_pardus
MGP_CAROLIEiJ_G0029907	Blm	100	72.867	ENSPTIG00000016168	BLM	100	72.727	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0029907	Blm	100	74.772	ENSPTRG00000007460	BLM	100	75.245	Pan_troglodytes
MGP_CAROLIEiJ_G0029907	Blm	100	74.842	ENSPANG00000018572	BLM	92	91.375	Papio_anubis
MGP_CAROLIEiJ_G0029907	Blm	78	62.500	ENSPKIG00000008954	blm	66	62.633	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0029907	Blm	50	67.318	ENSPMGG00000006629	blm	79	67.270	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0029907	Blm	100	82.934	ENSPEMG00000017348	Blm	100	82.863	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0029907	Blm	50	59.551	ENSPMAG00000000445	blm	96	59.691	Petromyzon_marinus
MGP_CAROLIEiJ_G0029907	Blm	99	60.544	ENSPCIG00000006609	BLM	99	60.627	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0029907	Blm	58	62.424	ENSPFOG00000005059	blm	99	46.804	Poecilia_formosa
MGP_CAROLIEiJ_G0029907	Blm	55	64.987	ENSPLAG00000017344	blm	56	65.245	Poecilia_latipinna
MGP_CAROLIEiJ_G0029907	Blm	55	64.987	ENSPMEG00000000321	blm	56	65.245	Poecilia_mexicana
MGP_CAROLIEiJ_G0029907	Blm	55	64.987	ENSPREG00000007715	blm	56	65.116	Poecilia_reticulata
MGP_CAROLIEiJ_G0029907	Blm	100	73.375	ENSPPYG00000006784	BLM	100	74.001	Pongo_abelii
MGP_CAROLIEiJ_G0029907	Blm	74	83.871	ENSPCAG00000008960	BLM	74	83.871	Procavia_capensis
MGP_CAROLIEiJ_G0029907	Blm	100	69.333	ENSPCOG00000000439	BLM	100	70.659	Propithecus_coquereli
MGP_CAROLIEiJ_G0029907	Blm	80	93.248	ENSPVAG00000011642	BLM	83	93.248	Pteropus_vampyrus
MGP_CAROLIEiJ_G0029907	Blm	59	51.476	ENSPNYG00000010956	blm	57	51.878	Pundamilia_nyererei
MGP_CAROLIEiJ_G0029907	Blm	62	64.303	ENSPNAG00000011714	blm	87	64.100	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0029907	Blm	100	87.960	ENSRNOG00000011213	Blm	100	87.774	Rattus_norvegicus
MGP_CAROLIEiJ_G0029907	Blm	100	73.296	ENSRBIG00000029656	BLM	100	82.934	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0029907	Blm	100	74.350	ENSRROG00000037871	BLM	92	90.027	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0029907	Blm	91	72.896	ENSSBOG00000030957	BLM	100	72.985	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0029907	Blm	99	60.375	ENSSHAG00000007988	BLM	99	60.514	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0029907	Blm	54	64.668	ENSSFOG00015015462	blm	64	64.668	Scleropages_formosus
MGP_CAROLIEiJ_G0029907	Blm	59	61.484	ENSSMAG00000001120	blm	60	61.927	Scophthalmus_maximus
MGP_CAROLIEiJ_G0029907	Blm	59	62.204	ENSSDUG00000010955	blm	59	61.967	Seriola_dumerili
MGP_CAROLIEiJ_G0029907	Blm	59	62.515	ENSSLDG00000000634	blm	59	62.574	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0029907	Blm	93	65.587	ENSSARG00000006398	BLM	99	65.136	Sorex_araneus
MGP_CAROLIEiJ_G0029907	Blm	74	59.069	ENSSPUG00000000013	BLM	96	56.344	Sphenodon_punctatus
MGP_CAROLIEiJ_G0029907	Blm	100	73.747	ENSSSCG00000001816	BLM	99	74.257	Sus_scrofa
MGP_CAROLIEiJ_G0029907	Blm	79	49.915	ENSTGUG00000009959	-	99	49.957	Taeniopygia_guttata
MGP_CAROLIEiJ_G0029907	Blm	80	49.616	ENSTRUG00000019860	blm	69	61.252	Takifugu_rubripes
MGP_CAROLIEiJ_G0029907	Blm	55	64.086	ENSTNIG00000019246	blm	58	64.076	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0029907	Blm	79	78.639	ENSTBEG00000006706	BLM	81	78.639	Tupaia_belangeri
MGP_CAROLIEiJ_G0029907	Blm	100	74.404	ENSTTRG00000016386	BLM	100	74.825	Tursiops_truncatus
MGP_CAROLIEiJ_G0029907	Blm	100	75.193	ENSUMAG00000009105	BLM	97	88.784	Ursus_maritimus
MGP_CAROLIEiJ_G0029907	Blm	99	72.070	ENSVPAG00000000085	BLM	99	72.370	Vicugna_pacos
MGP_CAROLIEiJ_G0029907	Blm	100	73.366	ENSVVUG00000006402	BLM	100	75.329	Vulpes_vulpes
MGP_CAROLIEiJ_G0029907	Blm	99	49.733	ENSXETG00000007847	blm	54	71.282	Xenopus_tropicalis
MGP_CAROLIEiJ_G0029907	Blm	55	61.161	ENSXCOG00000020227	blm	55	61.677	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0029907	Blm	55	64.645	ENSXMAG00000002951	blm	56	65.032	Xiphophorus_maculatus