EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030050 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 58897 bases
Position: chr7:103230922-103289818
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0080919	Ribosomal_S10	PF00338.22	7.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0080921	-	837	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080920	-	1876	-	MGP_CAROLIEiJ_P0080920	66 (aa)	-	-
MGP_CAROLIEiJ_T0080923	-	877	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080922	-	713	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080925	-	274	-	MGP_CAROLIEiJ_P0080925	69 (aa)	-	-
MGP_CAROLIEiJ_T0080919	-	4284	-	MGP_CAROLIEiJ_P0080919	86 (aa)	-	-
MGP_CAROLIEiJ_T0080926	-	609	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0080924	-	407	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030050	-	99	88.235	ENSG00000175581	MRPL48	76	87.209	Homo_sapiens
MGP_CAROLIEiJ_G0030050	-	100	65.116	ENSCPBG00000000043	MRPL48	75	65.116	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030050	-	100	88.372	ENSDORG00000000644	-	76	88.372	Dipodomys_ordii
MGP_CAROLIEiJ_G0030050	-	100	88.372	ENSFCAG00000025668	MRPL48	76	88.372	Felis_catus
MGP_CAROLIEiJ_G0030050	-	99	88.235	ENSGGOG00000022915	MRPL48	76	87.209	Gorilla_gorilla
MGP_CAROLIEiJ_G0030050	-	100	94.186	ENSHGLG00000006113	MRPL48	76	94.186	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030050	-	100	87.209	ENSMNEG00000043715	MRPL48	76	87.209	Macaca_nemestrina
MGP_CAROLIEiJ_G0030050	-	100	94.186	ENSMOCG00000013808	Mrpl48	76	94.186	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030050	-	100	58.140	ENSMMOG00000020651	mrpl48	75	58.140	Mola_mola
MGP_CAROLIEiJ_G0030050	-	100	96.512	ENSMUSG00000030706	Mrpl48	76	96.512	Mus_musculus
MGP_CAROLIEiJ_G0030050	-	100	53.488	ENSNBRG00000005766	-	89	53.488	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030050	-	100	88.372	ENSODEG00000005929	MRPL48	76	88.372	Octodon_degus
MGP_CAROLIEiJ_G0030050	-	100	91.860	ENSOGAG00000004771	-	59	91.860	Otolemur_garnettii
MGP_CAROLIEiJ_G0030050	-	100	89.535	ENSPPRG00000008470	MRPL48	76	89.535	Panthera_pardus
MGP_CAROLIEiJ_G0030050	-	100	89.535	ENSPTIG00000020025	MRPL48	76	89.535	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030050	-	100	61.628	ENSPKIG00000024210	mrpl48	75	61.628	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030050	-	100	95.349	ENSPEMG00000021769	Mrpl48	76	95.349	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030050	-	100	86.047	ENSSBOG00000028791	-	89	86.047	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030050	-	100	89.535	ENSUAMG00000017695	-	70	89.535	Ursus_americanus
MGP_CAROLIEiJ_G0030050	-	100	90.698	ENSVVUG00000024543	-	76	90.698	Vulpes_vulpes