EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030236 (Gene tree)
Gene ID: 110299375
Gene Symbol: Rrp8
Alias: 1500003O22Rik|2900001K19Rik
Full Name: ribosomal RNA processing 8
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 5189 bases
Position: chr7:108119358-108124546
Accession: 110299375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0081355	Methyltransf_8	PF05148.15	4.2e-104	1	1
MGP_CAROLIEiJ_P0081356	Methyltransf_8	PF05148.15	5.2e-104	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0081360	-	411	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081355	-	2573	XM_021169046	MGP_CAROLIEiJ_P0081355	457 (aa)	XP_021024705	UPI000A315A3D
MGP_CAROLIEiJ_T0081357	-	834	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081356	-	2204	-	MGP_CAROLIEiJ_P0081356	504 (aa)	-	-
MGP_CAROLIEiJ_T0081359	-	522	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081358	-	545	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030236's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.419	ENSG00000132275	RRP8	100	76.638	Homo_sapiens
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.946	ENSAMEG00000016307	RRP8	100	75.817	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030236	Rrp8	100	77.024	ENSANAG00000028524	RRP8	100	77.024	Aotus_nancymaae
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.870	ENSBTAG00000000697	RRP8	100	75.870	Bos_taurus
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.711	ENSCJAG00000014012	RRP8	100	75.930	Callithrix_jacchus
MGP_CAROLIEiJ_G0030236	Rrp8	100	71.706	ENSCAFG00000006476	RRP8	68	73.922	Canis_familiaris
MGP_CAROLIEiJ_G0030236	Rrp8	100	71.706	ENSCAFG00020009685	RRP8	100	73.922	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.728	ENSCHIG00000019002	RRP8	94	74.728	Capra_hircus
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.599	ENSTSYG00000003391	RRP8	100	75.599	Carlito_syrichta
MGP_CAROLIEiJ_G0030236	Rrp8	84	70.876	ENSCAPG00000013284	RRP8	100	71.134	Cavia_aperea
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.403	ENSCPOG00000012515	RRP8	100	74.620	Cavia_porcellus
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.586	ENSCCAG00000035197	RRP8	100	76.586	Cebus_capucinus
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.109	ENSCATG00000029344	RRP8	100	75.109	Cercocebus_atys
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.187	ENSCLAG00000016099	RRP8	100	74.187	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030236	Rrp8	100	73.581	ENSCSAG00000004345	RRP8	100	73.581	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030236	Rrp8	52	50.628	ENSCSAVG00000006435	-	59	50.628	Ciona_savignyi
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.328	ENSCANG00000040771	RRP8	100	75.328	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030236	Rrp8	100	88.403	ENSCGRG00001003103	Rrp8	100	88.403	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030236	Rrp8	100	87.965	ENSCGRG00000014009	Rrp8	100	87.965	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030236	Rrp8	60	53.261	ENSCSEG00000007330	rrp8	69	53.261	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0030236	Rrp8	67	47.078	ENSDARG00000071652	rrp8	80	58.772	Danio_rerio
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.510	ENSDNOG00000000812	RRP8	91	74.728	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030236	Rrp8	100	78.166	ENSDORG00000000103	Rrp8	100	78.166	Dipodomys_ordii
MGP_CAROLIEiJ_G0030236	Rrp8	100	72.391	ENSETEG00000008877	RRP8	100	72.391	Echinops_telfairi
MGP_CAROLIEiJ_G0030236	Rrp8	97	76.697	ENSEASG00005001761	RRP8	100	76.586	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030236	Rrp8	88	75.434	ENSECAG00000006612	RRP8	83	75.359	Equus_caballus
MGP_CAROLIEiJ_G0030236	Rrp8	93	74.424	ENSFCAG00000015384	RRP8	84	89.744	Felis_catus
MGP_CAROLIEiJ_G0030236	Rrp8	100	72.451	ENSFDAG00000008872	RRP8	100	72.944	Fukomys_damarensis
MGP_CAROLIEiJ_G0030236	Rrp8	70	48.615	ENSGACG00000011343	rrp8	84	48.615	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0030236	Rrp8	84	46.115	ENSGAGG00000005261	RRP8	83	46.115	Gopherus_agassizii
MGP_CAROLIEiJ_G0030236	Rrp8	100	77.293	ENSGGOG00000000389	RRP8	100	77.293	Gorilla_gorilla
MGP_CAROLIEiJ_G0030236	Rrp8	100	71.522	ENSHGLG00000003980	RRP8	100	71.522	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030236	Rrp8	100	71.522	ENSHGLG00100015659	RRP8	100	71.522	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.381	ENSSTOG00000016272	RRP8	100	75.381	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030236	Rrp8	100	79.348	ENSJJAG00000020608	-	100	79.348	Jaculus_jaculus
MGP_CAROLIEiJ_G0030236	Rrp8	58	52.416	ENSLBEG00000019937	rrp8	68	52.416	Labrus_bergylta
MGP_CAROLIEiJ_G0030236	Rrp8	54	57.085	ENSLACG00000001252	-	65	55.686	Latimeria_chalumnae
MGP_CAROLIEiJ_G0030236	Rrp8	59	51.282	ENSLOCG00000009591	rrp8	54	48.980	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030236	Rrp8	50	45.652	ENSLOCG00000013776	-	95	45.148	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.000	ENSLAFG00000000112	RRP8	100	75.000	Loxodonta_africana
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.546	ENSMFAG00000046084	RRP8	100	75.546	Macaca_fascicularis
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.328	ENSMMUG00000007738	RRP8	100	75.328	Macaca_mulatta
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.328	ENSMNEG00000029648	RRP8	100	75.328	Macaca_nemestrina
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.546	ENSMLEG00000035110	RRP8	100	75.546	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030236	Rrp8	65	49.835	ENSMAMG00000009679	rrp8	53	49.835	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030236	Rrp8	100	84.017	ENSMAUG00000000324	Rrp8	100	84.017	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030236	Rrp8	100	73.799	ENSMICG00000038472	RRP8	100	87.179	Microcebus_murinus
MGP_CAROLIEiJ_G0030236	Rrp8	100	87.746	ENSMOCG00000002486	Rrp8	100	87.746	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030236	Rrp8	100	98.249	ENSMUSG00000030888	Rrp8	100	98.249	Mus_musculus
MGP_CAROLIEiJ_G0030236	Rrp8	100	96.718	MGP_PahariEiJ_G0013451	Rrp8	100	96.718	Mus_pahari
MGP_CAROLIEiJ_G0030236	Rrp8	100	98.031	MGP_SPRETEiJ_G0031348	Rrp8	100	98.031	Mus_spretus
MGP_CAROLIEiJ_G0030236	Rrp8	100	73.218	ENSMPUG00000005510	RRP8	100	74.298	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030236	Rrp8	100	77.511	ENSMLUG00000008938	RRP8	100	77.511	Myotis_lucifugus
MGP_CAROLIEiJ_G0030236	Rrp8	100	81.400	ENSNGAG00000012450	Rrp8	100	82.057	Nannospalax_galili
MGP_CAROLIEiJ_G0030236	Rrp8	56	52.529	ENSNBRG00000023416	rrp8	76	58.879	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.672	ENSNLEG00000017445	RRP8	100	74.891	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030236	Rrp8	60	67.029	ENSMEUG00000004945	-	100	67.029	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030236	Rrp8	93	73.598	ENSOPRG00000008052	RRP8	100	72.174	Ochotona_princeps
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.403	ENSODEG00000011209	RRP8	100	74.403	Octodon_degus
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.492	ENSOCUG00000027619	RRP8	100	75.492	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030236	Rrp8	95	38.750	ENSORLG00000004175	rrp8	55	49.682	Oryzias_latipes
MGP_CAROLIEiJ_G0030236	Rrp8	96	73.469	ENSOGAG00000007184	RRP8	100	73.523	Otolemur_garnettii
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.163	ENSOARG00000017435	RRP8	70	75.163	Ovis_aries
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.638	ENSPPAG00000040792	RRP8	100	76.856	Pan_paniscus
MGP_CAROLIEiJ_G0030236	Rrp8	93	76.798	ENSPPRG00000022654	RRP8	100	75.216	Panthera_pardus
MGP_CAROLIEiJ_G0030236	Rrp8	93	76.798	ENSPTIG00000011321	RRP8	100	75.216	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.419	ENSPTRG00000003297	RRP8	100	76.638	Pan_troglodytes
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.328	ENSPANG00000006537	RRP8	100	75.328	Papio_anubis
MGP_CAROLIEiJ_G0030236	Rrp8	100	88.621	ENSPEMG00000017257	Rrp8	100	88.621	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.419	ENSPPYG00000003538	RRP8	100	76.638	Pongo_abelii
MGP_CAROLIEiJ_G0030236	Rrp8	100	71.522	ENSPCAG00000016176	RRP8	100	71.522	Procavia_capensis
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.764	ENSPCOG00000024627	RRP8	100	88.034	Propithecus_coquereli
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.492	ENSPVAG00000002420	RRP8	100	75.711	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030236	Rrp8	100	92.341	ENSRNOG00000018766	Rrp8	100	98.140	Rattus_norvegicus
MGP_CAROLIEiJ_G0030236	Rrp8	100	75.109	ENSRBIG00000044485	RRP8	100	75.109	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.672	ENSRROG00000045322	RRP8	100	74.672	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.906	ENSSBOG00000035280	RRP8	100	76.906	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030236	Rrp8	98	53.307	ENSSHAG00000009273	-	99	54.086	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.454	ENSSARG00000007949	RRP8	100	74.454	Sorex_araneus
MGP_CAROLIEiJ_G0030236	Rrp8	64	52.027	ENSSPAG00000006664	rrp8	79	61.818	Stegastes_partitus
MGP_CAROLIEiJ_G0030236	Rrp8	100	71.957	ENSSSCG00000023880	RRP8	100	72.234	Sus_scrofa
MGP_CAROLIEiJ_G0030236	Rrp8	93	76.471	ENSTBEG00000000237	RRP8	100	76.706	Tupaia_belangeri
MGP_CAROLIEiJ_G0030236	Rrp8	100	76.087	ENSTTRG00000004867	RRP8	100	76.087	Tursiops_truncatus
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.946	ENSUAMG00000025756	RRP8	100	75.817	Ursus_americanus
MGP_CAROLIEiJ_G0030236	Rrp8	100	74.728	ENSUMAG00000000528	RRP8	96	75.599	Ursus_maritimus
MGP_CAROLIEiJ_G0030236	Rrp8	100	73.593	ENSVPAG00000008019	RRP8	100	75.541	Vicugna_pacos
MGP_CAROLIEiJ_G0030236	Rrp8	100	69.102	ENSVVUG00000024346	RRP8	99	73.378	Vulpes_vulpes
MGP_CAROLIEiJ_G0030236	Rrp8	54	55.823	ENSXCOG00000006156	rrp8	65	55.823	Xiphophorus_couchianus