EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0030382 (Gene tree)
Gene ID
110298356
Gene Symbol
Thumpd1
Alias
6330575P11Rik
Full Name
THUMP domain containing 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
5775 bases
Position
chr7:121887676-121893450
Accession
110298356
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0081825THUMPPF02926.172.1e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0081825-2926-MGP_CAROLIEiJ_P0081825350 (aa)XP_021023201UPI000A316CB2
Gene Model
Click here to download MGP_CAROLIEiJ_G0030382's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030382's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0030382Thumpd110083.003ENSG00000066654THUMPD110083.003Homo_sapiens
MGP_CAROLIEiJ_G0030382Thumpd17757.091ENSAPOG00000008440thumpd18558.238Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0030382Thumpd110082.961ENSAMEG00000006257THUMPD19982.961Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030382Thumpd17360.156ENSACIG00000024395thumpd17659.216Amphilophus_citrinellus
MGP_CAROLIEiJ_G0030382Thumpd17955.477ENSAOCG00000003509thumpd18455.830Amphiprion_ocellaris
MGP_CAROLIEiJ_G0030382Thumpd19052.484ENSAPEG00000010515thumpd19552.795Amphiprion_percula
MGP_CAROLIEiJ_G0030382Thumpd17757.778ENSATEG00000004737thumpd18457.565Anabas_testudineus
MGP_CAROLIEiJ_G0030382Thumpd17080.242ENSAPLG00000015259THUMPD18780.645Anas_platyrhynchos
MGP_CAROLIEiJ_G0030382Thumpd18068.403ENSACAG00000009625-8870.139Anolis_carolinensis
MGP_CAROLIEiJ_G0030382Thumpd110081.303ENSANAG00000026882-10081.303Aotus_nancymaae
MGP_CAROLIEiJ_G0030382Thumpd19867.246ENSANAG00000027311-9966.959Aotus_nancymaae
MGP_CAROLIEiJ_G0030382Thumpd110066.006ENSANAG00000027040-10066.006Aotus_nancymaae
MGP_CAROLIEiJ_G0030382Thumpd17358.238ENSACLG00000004830thumpd19551.875Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030382Thumpd19253.776ENSAMXG00000012356thumpd19853.776Astyanax_mexicanus
MGP_CAROLIEiJ_G0030382Thumpd19983.193ENSBTAG00000047673THUMPD110083.193Bos_taurus
MGP_CAROLIEiJ_G0030382Thumpd19682.301ENSCJAG00000009499THUMPD110081.586Callithrix_jacchus
MGP_CAROLIEiJ_G0030382Thumpd110083.473ENSCAFG00000017985THUMPD19983.473Canis_familiaris
MGP_CAROLIEiJ_G0030382Thumpd110083.473ENSCAFG00020021861THUMPD19983.473Canis_lupus_dingo
MGP_CAROLIEiJ_G0030382Thumpd19982.633ENSCHIG00000010134THUMPD19982.073Capra_hircus
MGP_CAROLIEiJ_G0030382Thumpd110082.768ENSTSYG00000011537THUMPD110082.768Carlito_syrichta
MGP_CAROLIEiJ_G0030382Thumpd19682.698ENSCPOG00000023684-10081.690Cavia_porcellus
MGP_CAROLIEiJ_G0030382Thumpd19682.698ENSCPOG00000008919-10081.690Cavia_porcellus
MGP_CAROLIEiJ_G0030382Thumpd110075.783ENSCCAG00000019379-8675.783Cebus_capucinus
MGP_CAROLIEiJ_G0030382Thumpd110081.020ENSCCAG00000030205THUMPD110081.020Cebus_capucinus
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSCATG00000040309THUMPD110082.153Cercocebus_atys
MGP_CAROLIEiJ_G0030382Thumpd19968.347ENSCATG00000020844-9968.347Cercocebus_atys
MGP_CAROLIEiJ_G0030382Thumpd110081.356ENSCLAG00000016508THUMPD110080.791Chinchilla_lanigera
MGP_CAROLIEiJ_G0030382Thumpd19982.102ENSCSAG00000007610THUMPD19982.102Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030382Thumpd110064.804ENSCSAG00000009860-8064.804Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030382Thumpd110082.682ENSCHOG00000005587THUMPD110081.844Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030382Thumpd18872.168ENSCPBG00000019055THUMPD18772.168Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030382Thumpd18771.753ENSCANG00000035822-10071.753Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030382Thumpd18774.837ENSCANG00000038770THUMPD110074.837Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030382Thumpd110088.385ENSCGRG00001014829Thumpd110088.385Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030382Thumpd110088.385ENSCGRG00000000060Thumpd110088.385Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030382Thumpd17359.375ENSCSEG00000002041thumpd18259.375Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0030382Thumpd17362.646ENSCVAG00000014960thumpd17962.646Cyprinodon_variegatus
MGP_CAROLIEiJ_G0030382Thumpd17058.566ENSDARG00000100264thumpd17258.333Danio_rerio
MGP_CAROLIEiJ_G0030382Thumpd110083.799ENSDNOG00000043510THUMPD110083.240Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030382Thumpd19980.737ENSDORG00000028216Thumpd19980.737Dipodomys_ordii
MGP_CAROLIEiJ_G0030382Thumpd17634.875FBgn0035532CG150148631.894Drosophila_melanogaster
MGP_CAROLIEiJ_G0030382Thumpd19675.000ENSETEG00000002763THUMPD18473.538Echinops_telfairi
MGP_CAROLIEiJ_G0030382Thumpd17742.086ENSEBUG00000011011THUMPD17541.727Eptatretus_burgeri
MGP_CAROLIEiJ_G0030382Thumpd15474.619ENSEASG00005017428-10074.619Equus_asinus_asinus
MGP_CAROLIEiJ_G0030382Thumpd110080.447ENSECAG00000005354THUMPD110079.888Equus_caballus
MGP_CAROLIEiJ_G0030382Thumpd110080.165ENSEEUG00000011256THUMPD18880.441Erinaceus_europaeus
MGP_CAROLIEiJ_G0030382Thumpd17560.153ENSELUG00000013612thumpd16161.303Esox_lucius
MGP_CAROLIEiJ_G0030382Thumpd110083.240ENSFCAG00000039296THUMPD110083.240Felis_catus
MGP_CAROLIEiJ_G0030382Thumpd16580.786ENSFALG00000014029THUMPD18281.223Ficedula_albicollis
MGP_CAROLIEiJ_G0030382Thumpd17358.301ENSFHEG00000013319thumpd17458.915Fundulus_heteroclitus
MGP_CAROLIEiJ_G0030382Thumpd17363.529ENSGMOG00000003369thumpd18062.353Gadus_morhua
MGP_CAROLIEiJ_G0030382Thumpd18255.172ENSGAFG00000011000thumpd19055.517Gambusia_affinis
MGP_CAROLIEiJ_G0030382Thumpd17661.049ENSGACG00000019511thumpd18061.049Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0030382Thumpd18472.973ENSGAGG00000008225THUMPD19272.973Gopherus_agassizii
MGP_CAROLIEiJ_G0030382Thumpd110082.720ENSGGOG00000005231-8082.720Gorilla_gorilla
MGP_CAROLIEiJ_G0030382Thumpd18564.765ENSGGOG00000043232-10059.375Gorilla_gorilla
MGP_CAROLIEiJ_G0030382Thumpd17358.238ENSHBUG00000017996thumpd19551.875Haplochromis_burtoni
MGP_CAROLIEiJ_G0030382Thumpd110082.817ENSHGLG00000011001-10082.254Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030382Thumpd15972.038ENSHGLG00000000952-9872.038Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030382Thumpd15972.038ENSHGLG00100010577-9872.038Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030382Thumpd110083.380ENSHGLG00100016023THUMPD110082.817Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030382Thumpd16655.128ENSHCOG00000008618thumpd15453.846Hippocampus_comes
MGP_CAROLIEiJ_G0030382Thumpd16660.776ENSIPUG00000012500thumpd16056.809Ictalurus_punctatus
MGP_CAROLIEiJ_G0030382Thumpd110084.463ENSSTOG00000007011THUMPD110084.463Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030382Thumpd110082.768ENSJJAG00000004295-10082.768Jaculus_jaculus
MGP_CAROLIEiJ_G0030382Thumpd17352.852ENSKMAG00000009545thumpd18845.455Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0030382Thumpd17659.273ENSLBEG00000009349thumpd17761.176Labrus_bergylta
MGP_CAROLIEiJ_G0030382Thumpd17467.708ENSLACG00000005833THUMPD19757.983Latimeria_chalumnae
MGP_CAROLIEiJ_G0030382Thumpd17564.179ENSLOCG00000000854thumpd18464.552Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030382Thumpd110080.447ENSLAFG00000025838THUMPD110080.447Loxodonta_africana
MGP_CAROLIEiJ_G0030382Thumpd18768.810ENSMFAG00000041474-10068.810Macaca_fascicularis
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSMFAG00000036996THUMPD110082.153Macaca_fascicularis
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSMMUG00000004225THUMPD110082.153Macaca_mulatta
MGP_CAROLIEiJ_G0030382Thumpd18768.489ENSMMUG00000038414-10068.489Macaca_mulatta
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSMNEG00000020726THUMPD110082.153Macaca_nemestrina
MGP_CAROLIEiJ_G0030382Thumpd18768.489ENSMNEG00000038856-10068.489Macaca_nemestrina
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSMLEG00000036436THUMPD110082.153Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030382Thumpd18768.285ENSMLEG00000030012-9968.932Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030382Thumpd18952.733ENSMAMG00000006858thumpd19052.412Mastacembelus_armatus
MGP_CAROLIEiJ_G0030382Thumpd17358.238ENSMZEG00005013693thumpd19551.875Maylandia_zebra
MGP_CAROLIEiJ_G0030382Thumpd15385.561ENSMGAG00000010340THUMPD18885.083Meleagris_gallopavo
MGP_CAROLIEiJ_G0030382Thumpd110088.952ENSMAUG00000013306Thumpd110088.385Mesocricetus_auratus
MGP_CAROLIEiJ_G0030382Thumpd19368.389ENSMICG00000030865-9068.389Microcebus_murinus
MGP_CAROLIEiJ_G0030382Thumpd110084.181ENSMICG00000038483-10084.181Microcebus_murinus
MGP_CAROLIEiJ_G0030382Thumpd110090.935ENSMOCG00000003447Thumpd110090.935Microtus_ochrogaster
MGP_CAROLIEiJ_G0030382Thumpd17358.846ENSMMOG00000011323thumpd17658.846Mola_mola
MGP_CAROLIEiJ_G0030382Thumpd19973.077ENSMODG00000024776-9974.451Monodelphis_domestica
MGP_CAROLIEiJ_G0030382Thumpd19973.626ENSMODG00000006971-9874.451Monodelphis_domestica
MGP_CAROLIEiJ_G0030382Thumpd17360.156ENSMALG00000019522thumpd18557.934Monopterus_albus
MGP_CAROLIEiJ_G0030382Thumpd110098.000ENSMUSG00000030942Thumpd110098.000Mus_musculus
MGP_CAROLIEiJ_G0030382Thumpd110095.455MGP_PahariEiJ_G0013593Thumpd110095.455Mus_pahari
MGP_CAROLIEiJ_G0030382Thumpd18981.250ENSMLUG00000010547THUMPD19875.562Myotis_lucifugus
MGP_CAROLIEiJ_G0030382Thumpd19987.819ENSNGAG00000018643Thumpd110087.819Nannospalax_galili
MGP_CAROLIEiJ_G0030382Thumpd18353.716ENSNBRG00000006987thumpd18951.402Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSNLEG00000012369THUMPD110082.153Nomascus_leucogenys
MGP_CAROLIEiJ_G0030382Thumpd110066.102ENSOPRG00000011342THUMPD18666.102Ochotona_princeps
MGP_CAROLIEiJ_G0030382Thumpd19882.521ENSODEG00000012360THUMPD19981.948Octodon_degus
MGP_CAROLIEiJ_G0030382Thumpd17358.238ENSONIG00000000146thumpd18958.621Oreochromis_niloticus
MGP_CAROLIEiJ_G0030382Thumpd19668.466ENSOANG00000014297THUMPD19767.614Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030382Thumpd15980.476ENSOCUG00000025354-10077.273Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030382Thumpd19782.899ENSOCUG00000009895-9782.899Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030382Thumpd16961.983ENSORLG00000027557thumpd17861.983Oryzias_latipes
MGP_CAROLIEiJ_G0030382Thumpd16961.157ENSORLG00020010206thumpd17861.157Oryzias_latipes_hni
MGP_CAROLIEiJ_G0030382Thumpd16961.157ENSORLG00015009581thumpd17861.157Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0030382Thumpd17558.779ENSOMEG00000019361thumpd17958.779Oryzias_melastigma
MGP_CAROLIEiJ_G0030382Thumpd110081.921ENSOGAG00000026723THUMPD110081.921Otolemur_garnettii
MGP_CAROLIEiJ_G0030382Thumpd19983.193ENSOARG00000013107THUMPD19983.193Ovis_aries
MGP_CAROLIEiJ_G0030382Thumpd110082.436ENSPPAG00000033818-8082.436Pan_paniscus
MGP_CAROLIEiJ_G0030382Thumpd19663.314ENSPPAG00000001653-9669.903Pan_paniscus
MGP_CAROLIEiJ_G0030382Thumpd110084.078ENSPPRG00000014118-10084.078Panthera_pardus
MGP_CAROLIEiJ_G0030382Thumpd110083.240ENSPTIG00000013856-10083.240Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSPTRG00000007848THUMPD18082.153Pan_troglodytes
MGP_CAROLIEiJ_G0030382Thumpd18568.896ENSPTRG00000046073-10062.890Pan_troglodytes
MGP_CAROLIEiJ_G0030382Thumpd18769.032ENSPANG00000034881-9969.032Papio_anubis
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSPANG00000025507THUMPD110082.153Papio_anubis
MGP_CAROLIEiJ_G0030382Thumpd17862.637ENSPKIG00000014491thumpd17862.637Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030382Thumpd18074.643ENSPSIG00000012430THUMPD19774.643Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030382Thumpd17360.769ENSPMGG00000014479thumpd18960.385Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0030382Thumpd16671.795ENSPEMG00000002608-10071.795Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030382Thumpd16350.909ENSPMAG00000001389thumpd19351.220Petromyzon_marinus
MGP_CAROLIEiJ_G0030382Thumpd19971.545ENSPCIG00000029241THUMPD17272.358Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030382Thumpd18852.648ENSPFOG00000012649thumpd19852.960Poecilia_formosa
MGP_CAROLIEiJ_G0030382Thumpd18852.500ENSPLAG00000000137thumpd19852.812Poecilia_latipinna
MGP_CAROLIEiJ_G0030382Thumpd18852.812ENSPMEG00000007750thumpd19853.125Poecilia_mexicana
MGP_CAROLIEiJ_G0030382Thumpd18355.479ENSPREG00000000144thumpd19555.822Poecilia_reticulata
MGP_CAROLIEiJ_G0030382Thumpd17881.159ENSPPYG00000007160-10081.159Pongo_abelii
MGP_CAROLIEiJ_G0030382Thumpd17876.241ENSPCAG00000001534THUMPD110076.241Procavia_capensis
MGP_CAROLIEiJ_G0030382Thumpd110083.898ENSPCOG00000024663THUMPD110083.898Propithecus_coquereli
MGP_CAROLIEiJ_G0030382Thumpd110074.722ENSPVAG00000005659-10074.722Pteropus_vampyrus
MGP_CAROLIEiJ_G0030382Thumpd16168.750ENSPVAG00000003286-9968.750Pteropus_vampyrus
MGP_CAROLIEiJ_G0030382Thumpd17358.238ENSPNYG00000007061thumpd19451.875Pundamilia_nyererei
MGP_CAROLIEiJ_G0030382Thumpd18258.503ENSPNAG00000024872thumpd19458.844Pygocentrus_nattereri
MGP_CAROLIEiJ_G0030382Thumpd16289.041ENSRNOG00000014946AABR07005588.110089.041Rattus_norvegicus
MGP_CAROLIEiJ_G0030382Thumpd110082.153ENSRBIG00000040752THUMPD110082.153Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030382Thumpd18771.429ENSRBIG00000040136-10071.429Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030382Thumpd18771.104ENSRROG00000045699-10071.104Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030382Thumpd110082.436ENSRROG00000042189THUMPD110082.436Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030382Thumpd110081.586ENSSBOG00000034246THUMPD110081.586Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030382Thumpd19974.444ENSSHAG00000003853THUMPD19974.444Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030382Thumpd17455.212ENSSFOG00015007512thumpd18552.281Scleropages_formosus
MGP_CAROLIEiJ_G0030382Thumpd19052.229ENSSMAG00000000723thumpd19152.229Scophthalmus_maximus
MGP_CAROLIEiJ_G0030382Thumpd18354.452ENSSDUG00000014502thumpd18954.795Seriola_dumerili
MGP_CAROLIEiJ_G0030382Thumpd18354.795ENSSLDG00000007694thumpd18955.137Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0030382Thumpd19169.255ENSSPUG00000005096THUMPD19569.565Sphenodon_punctatus
MGP_CAROLIEiJ_G0030382Thumpd18554.667ENSSPAG00000006993thumpd19154.426Stegastes_partitus
MGP_CAROLIEiJ_G0030382Thumpd110082.730ENSSSCG00000024748THUMPD110082.730Sus_scrofa
MGP_CAROLIEiJ_G0030382Thumpd16980.000ENSTGUG00000009247THUMPD18980.408Taeniopygia_guttata
MGP_CAROLIEiJ_G0030382Thumpd17360.311ENSTRUG00000015656thumpd17960.311Takifugu_rubripes
MGP_CAROLIEiJ_G0030382Thumpd18554.882ENSTNIG00000001584thumpd19555.556Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0030382Thumpd110081.921ENSTBEG00000005252THUMPD18881.921Tupaia_belangeri
MGP_CAROLIEiJ_G0030382Thumpd110083.799ENSTTRG00000016435THUMPD110083.799Tursiops_truncatus
MGP_CAROLIEiJ_G0030382Thumpd16270.089ENSUAMG00000005779-10070.089Ursus_americanus
MGP_CAROLIEiJ_G0030382Thumpd110082.123ENSVPAG00000003422THUMPD110082.123Vicugna_pacos
MGP_CAROLIEiJ_G0030382Thumpd110083.193ENSVVUG00000023241THUMPD19983.193Vulpes_vulpes
MGP_CAROLIEiJ_G0030382Thumpd17961.594ENSXETG00000005539thumpd19361.818Xenopus_tropicalis
MGP_CAROLIEiJ_G0030382Thumpd17359.533ENSXMAG00000026052thumpd18059.922Xiphophorus_maculatus

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