EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030385 (Gene tree)
Gene ID: 110298808
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 51668 bases
Position: chr7:121959424-122011091
Accession: 110298808
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0081845	RRM_1	PF00076.22	1e-12	1	1
MGP_CAROLIEiJ_P0081842	RRM_1	PF00076.22	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0081845	-	2277	-	MGP_CAROLIEiJ_P0081845	758 (aa)	-	UPI000A316E4B
MGP_CAROLIEiJ_T0081844	-	2005	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081847	-	797	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081846	-	327	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081841	-	1995	-	MGP_CAROLIEiJ_P0081841	479 (aa)	-	-
MGP_CAROLIEiJ_T0081843	-	2005	-	MGP_CAROLIEiJ_P0081843	43 (aa)	-	-
MGP_CAROLIEiJ_T0081842	-	2492	XM_021168284	MGP_CAROLIEiJ_P0081842	759 (aa)	XP_021023943	-
MGP_CAROLIEiJ_T0081849	-	295	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081848	-	237	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030385	-	99	68.312	ENSG00000005189	REXO5	100	81.119	Homo_sapiens
MGP_CAROLIEiJ_G0030385	-	97	31.390	ENSAPOG00000008514	REXO5	97	31.390	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0030385	-	99	68.442	ENSAMEG00000006178	REXO5	99	68.442	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030385	-	50	39.062	ENSAOCG00000003481	-	71	39.687	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0030385	-	97	32.690	ENSAPEG00000010627	REXO5	98	32.690	Amphiprion_percula
MGP_CAROLIEiJ_G0030385	-	77	36.408	ENSATEG00000004682	REXO5	98	36.204	Anabas_testudineus
MGP_CAROLIEiJ_G0030385	-	93	45.491	ENSAPLG00000015740	REXO5	99	45.491	Anas_platyrhynchos
MGP_CAROLIEiJ_G0030385	-	94	43.775	ENSACAG00000009744	REXO5	94	43.775	Anolis_carolinensis
MGP_CAROLIEiJ_G0030385	-	98	67.018	ENSANAG00000034379	REXO5	98	67.018	Aotus_nancymaae
MGP_CAROLIEiJ_G0030385	-	77	32.551	ENSACLG00000004778	REXO5	99	32.551	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030385	-	99	66.276	ENSBTAG00000006449	REXO5	98	66.276	Bos_taurus
MGP_CAROLIEiJ_G0030385	-	99	65.459	ENSCJAG00000009363	REXO5	99	65.459	Callithrix_jacchus
MGP_CAROLIEiJ_G0030385	-	99	67.529	ENSCAFG00000017924	REXO5	100	67.663	Canis_familiaris
MGP_CAROLIEiJ_G0030385	-	99	65.847	ENSCAFG00020021846	REXO5	99	65.847	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030385	-	99	66.753	ENSCHIG00000022443	REXO5	99	66.753	Capra_hircus
MGP_CAROLIEiJ_G0030385	-	99	62.661	ENSCPOG00000008940	REXO5	94	64.234	Cavia_porcellus
MGP_CAROLIEiJ_G0030385	-	99	67.141	ENSCCAG00000034936	REXO5	99	67.141	Cebus_capucinus
MGP_CAROLIEiJ_G0030385	-	99	68.497	ENSCATG00000044063	REXO5	99	68.497	Cercocebus_atys
MGP_CAROLIEiJ_G0030385	-	99	64.083	ENSCLAG00000008033	REXO5	95	64.083	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030385	-	99	68.497	ENSCSAG00000007562	REXO5	99	68.497	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030385	-	75	66.234	ENSCHOG00000009146	-	76	66.234	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030385	-	99	44.036	ENSCPBG00000019062	REXO5	97	44.036	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030385	-	99	68.235	ENSCANG00000035776	REXO5	99	68.235	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030385	-	100	78.255	ENSCGRG00001016179	-	100	78.255	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030385	-	100	78.255	ENSCGRG00000010868	-	99	79.073	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030385	-	94	70.028	ENSEASG00005007266	REXO5	98	71.364	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030385	-	98	68.254	ENSECAG00000018769	REXO5	87	68.254	Equus_caballus
MGP_CAROLIEiJ_G0030385	-	85	67.251	ENSEEUG00000003572	REXO5	89	67.251	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030385	-	99	67.658	ENSFCAG00000015160	REXO5	99	67.658	Felis_catus
MGP_CAROLIEiJ_G0030385	-	94	44.669	ENSFALG00000014026	REXO5	99	44.669	Ficedula_albicollis
MGP_CAROLIEiJ_G0030385	-	98	43.758	ENSGALG00000002239	REXO5	98	43.758	Gallus_gallus
MGP_CAROLIEiJ_G0030385	-	51	41.772	ENSGACG00000019507	-	83	41.772	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0030385	-	94	44.564	ENSGAGG00000008242	REXO5	93	44.564	Gopherus_agassizii
MGP_CAROLIEiJ_G0030385	-	99	68.235	ENSGGOG00000004539	REXO5	99	68.235	Gorilla_gorilla
MGP_CAROLIEiJ_G0030385	-	91	32.620	ENSHBUG00000017976	REXO5	92	32.620	Haplochromis_burtoni
MGP_CAROLIEiJ_G0030385	-	87	64.072	ENSHGLG00000012652	REXO5	99	64.072	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030385	-	99	62.924	ENSHGLG00100013255	REXO5	99	65.463	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030385	-	62	38.494	ENSHCOG00000008648	REXO5	92	36.262	Hippocampus_comes
MGP_CAROLIEiJ_G0030385	-	86	63.030	ENSSTOG00000007071	REXO5	97	63.030	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030385	-	94	70.670	ENSJJAG00000023821	-	95	70.670	Jaculus_jaculus
MGP_CAROLIEiJ_G0030385	-	98	31.158	ENSKMAG00000009488	REXO5	98	31.158	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0030385	-	98	32.386	ENSLBEG00000009276	REXO5	99	32.386	Labrus_bergylta
MGP_CAROLIEiJ_G0030385	-	77	43.234	ENSLACG00000001758	REXO5	100	43.234	Latimeria_chalumnae
MGP_CAROLIEiJ_G0030385	-	98	68.591	ENSLAFG00000006157	REXO5	98	68.591	Loxodonta_africana
MGP_CAROLIEiJ_G0030385	-	99	68.366	ENSMFAG00000036613	REXO5	99	68.366	Macaca_fascicularis
MGP_CAROLIEiJ_G0030385	-	99	68.235	ENSMMUG00000016748	REXO5	99	68.235	Macaca_mulatta
MGP_CAROLIEiJ_G0030385	-	99	68.366	ENSMNEG00000045028	REXO5	99	68.366	Macaca_nemestrina
MGP_CAROLIEiJ_G0030385	-	99	68.497	ENSMLEG00000029851	REXO5	99	68.497	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030385	-	94	32.576	ENSMAMG00000006915	REXO5	91	32.576	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030385	-	91	32.262	ENSMZEG00005013657	REXO5	92	32.262	Maylandia_zebra
MGP_CAROLIEiJ_G0030385	-	94	45.067	ENSMGAG00000010369	REXO5	99	44.914	Meleagris_gallopavo
MGP_CAROLIEiJ_G0030385	-	99	68.475	ENSMICG00000014886	REXO5	99	68.475	Microcebus_murinus
MGP_CAROLIEiJ_G0030385	-	58	77.727	ENSMOCG00000010062	-	98	77.727	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030385	-	62	33.750	ENSMMOG00000011330	-	85	33.750	Mola_mola
MGP_CAROLIEiJ_G0030385	-	98	48.350	ENSMODG00000007059	REXO5	93	48.350	Monodelphis_domestica
MGP_CAROLIEiJ_G0030385	-	100	96.574	ENSMUSG00000030924	Rexo5	100	96.574	Mus_musculus
MGP_CAROLIEiJ_G0030385	-	100	96.838	MGP_SPRETEiJ_G0031499	-	100	96.838	Mus_spretus
MGP_CAROLIEiJ_G0030385	-	99	68.176	ENSMPUG00000013643	REXO5	99	68.176	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030385	-	94	73.259	ENSNGAG00000002025	-	98	74.828	Nannospalax_galili
MGP_CAROLIEiJ_G0030385	-	66	36.468	ENSNBRG00000006877	REXO5	91	34.315	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030385	-	99	67.788	ENSNLEG00000012334	REXO5	99	67.788	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030385	-	93	50.000	ENSMEUG00000015298	REXO5	99	50.000	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030385	-	88	59.176	ENSOPRG00000011398	REXO5	88	59.176	Ochotona_princeps
MGP_CAROLIEiJ_G0030385	-	71	37.684	ENSONIG00000000148	REXO5	97	36.525	Oreochromis_niloticus
MGP_CAROLIEiJ_G0030385	-	93	51.020	ENSOANG00000014291	REXO5	100	51.020	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030385	-	99	65.589	ENSOCUG00000009913	REXO5	99	65.589	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030385	-	97	31.625	ENSORLG00000009738	REXO5	99	31.625	Oryzias_latipes
MGP_CAROLIEiJ_G0030385	-	97	31.461	ENSORLG00020010270	REXO5	99	31.461	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0030385	-	97	30.914	ENSORLG00015009678	REXO5	99	30.914	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0030385	-	91	32.838	ENSOMEG00000019491	REXO5	91	32.838	Oryzias_melastigma
MGP_CAROLIEiJ_G0030385	-	99	65.455	ENSOGAG00000011564	REXO5	99	65.455	Otolemur_garnettii
MGP_CAROLIEiJ_G0030385	-	99	66.883	ENSOARG00000013401	REXO5	100	66.536	Ovis_aries
MGP_CAROLIEiJ_G0030385	-	99	68.235	ENSPPAG00000035005	REXO5	99	68.235	Pan_paniscus
MGP_CAROLIEiJ_G0030385	-	99	66.579	ENSPPRG00000022345	REXO5	99	66.579	Panthera_pardus
MGP_CAROLIEiJ_G0030385	-	99	67.400	ENSPTIG00000012096	REXO5	99	67.400	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030385	-	99	68.235	ENSPTRG00000007851	REXO5	99	68.235	Pan_troglodytes
MGP_CAROLIEiJ_G0030385	-	99	68.366	ENSPANG00000006898	REXO5	99	68.366	Papio_anubis
MGP_CAROLIEiJ_G0030385	-	91	36.039	ENSPKIG00000014406	REXO5	94	36.039	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030385	-	94	43.683	ENSPSIG00000012172	REXO5	94	43.683	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030385	-	99	49.625	ENSPCIG00000029238	-	99	49.625	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030385	-	97	30.545	ENSPFOG00000012767	REXO5	98	30.704	Poecilia_formosa
MGP_CAROLIEiJ_G0030385	-	97	30.424	ENSPLAG00000006408	REXO5	98	30.583	Poecilia_latipinna
MGP_CAROLIEiJ_G0030385	-	97	30.535	ENSPMEG00000007726	REXO5	98	30.779	Poecilia_mexicana
MGP_CAROLIEiJ_G0030385	-	97	30.535	ENSPREG00000000146	REXO5	98	30.535	Poecilia_reticulata
MGP_CAROLIEiJ_G0030385	-	99	68.105	ENSPPYG00000007163	REXO5	99	68.105	Pongo_abelii
MGP_CAROLIEiJ_G0030385	-	91	66.239	ENSPCAG00000006265	REXO5	100	66.239	Procavia_capensis
MGP_CAROLIEiJ_G0030385	-	99	67.829	ENSPCOG00000018775	REXO5	99	67.829	Propithecus_coquereli
MGP_CAROLIEiJ_G0030385	-	94	68.363	ENSPVAG00000003293	REXO5	99	68.363	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030385	-	78	35.880	ENSPNYG00000006922	REXO5	91	33.391	Pundamilia_nyererei
MGP_CAROLIEiJ_G0030385	-	90	32.823	ENSPNAG00000018866	-	91	32.823	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0030385	-	99	90.716	ENSRNOG00000014513	Rexo5	99	90.716	Rattus_norvegicus
MGP_CAROLIEiJ_G0030385	-	99	68.497	ENSRBIG00000035163	REXO5	88	68.497	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030385	-	99	68.366	ENSRROG00000034741	REXO5	99	68.366	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030385	-	99	67.529	ENSSBOG00000029650	REXO5	99	67.529	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030385	-	98	51.232	ENSSHAG00000005042	REXO5	98	51.232	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030385	-	91	38.345	ENSSFOG00015007581	REXO5	92	38.345	Scleropages_formosus
MGP_CAROLIEiJ_G0030385	-	91	32.279	ENSSMAG00000000709	REXO5	99	31.624	Scophthalmus_maximus
MGP_CAROLIEiJ_G0030385	-	91	32.115	ENSSDUG00000014528	REXO5	91	32.245	Seriola_dumerili
MGP_CAROLIEiJ_G0030385	-	91	32.148	ENSSLDG00000007641	REXO5	90	31.926	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0030385	-	99	67.571	ENSSSCG00000007855	REXO5	99	67.957	Sus_scrofa
MGP_CAROLIEiJ_G0030385	-	94	45.467	ENSTGUG00000009219	REXO5	99	45.467	Taeniopygia_guttata
MGP_CAROLIEiJ_G0030385	-	92	32.063	ENSTRUG00000015295	-	91	32.500	Takifugu_rubripes
MGP_CAROLIEiJ_G0030385	-	86	61.905	ENSTBEG00000008797	REXO5	90	61.905	Tupaia_belangeri
MGP_CAROLIEiJ_G0030385	-	99	65.974	ENSTTRG00000016439	REXO5	99	65.974	Tursiops_truncatus
MGP_CAROLIEiJ_G0030385	-	87	67.477	ENSUAMG00000017756	REXO5	99	67.477	Ursus_americanus
MGP_CAROLIEiJ_G0030385	-	50	64.083	ENSUMAG00000010466	-	93	64.341	Ursus_maritimus
MGP_CAROLIEiJ_G0030385	-	99	63.260	ENSVPAG00000003459	REXO5	99	63.260	Vicugna_pacos
MGP_CAROLIEiJ_G0030385	-	99	67.658	ENSVVUG00000023257	REXO5	99	67.658	Vulpes_vulpes
MGP_CAROLIEiJ_G0030385	-	95	42.308	ENSXETG00000016735	rexo5	99	42.308	Xenopus_tropicalis
MGP_CAROLIEiJ_G0030385	-	77	31.310	ENSXCOG00000015997	REXO5	71	31.260	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0030385	-	97	30.170	ENSXMAG00000014770	REXO5	98	30.255	Xiphophorus_maculatus