EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030424 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 38086 bases
Position: chr7:125083369-125121454
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0081993	zf-CCHC_2	PF13696.6	4.6e-09	1	1
MGP_CAROLIEiJ_P0081993	zf-CCHC	PF00098.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0081994	-	529	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081993	-	6019	-	MGP_CAROLIEiJ_P0081993	1279 (aa)	-	-
MGP_CAROLIEiJ_T0081992	-	1582	-	MGP_CAROLIEiJ_P0081992	385 (aa)	-	-
MGP_CAROLIEiJ_T0081991	-	691	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081990	-	822	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081988	-	6349	-	MGP_CAROLIEiJ_P0081988	123 (aa)	-	UPI00000281EB
MGP_CAROLIEiJ_T0081989	-	583	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0081987	-	478	-	MGP_CAROLIEiJ_P0081987	79 (aa)	-	UPI0003F485C5

Gene Model

Click here to download MGP_CAROLIEiJ_G0030424's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSG00000122257	RBBP6	96	98.496	Homo_sapiens
MGP_CAROLIEiJ_G0030424	-	99	88.402	ENSAMEG00000009312	RBBP6	65	92.265	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030424	-	99	67.506	ENSAPLG00000009569	RBBP6	69	70.321	Anas_platyrhynchos
MGP_CAROLIEiJ_G0030424	-	99	65.385	ENSACAG00000011794	RBBP6	61	67.935	Anolis_carolinensis
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSANAG00000037384	RBBP6	75	95.122	Aotus_nancymaae
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSBTAG00000009441	RBBP6	66	94.780	Bos_taurus
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSCJAG00000020661	RBBP6	75	95.122	Callithrix_jacchus
MGP_CAROLIEiJ_G0030424	-	100	94.805	ENSCAFG00000017566	RBBP6	69	93.169	Canis_familiaris
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSCHIG00000013732	RBBP6	67	94.780	Capra_hircus
MGP_CAROLIEiJ_G0030424	-	100	95.325	ENSTSYG00000000822	RBBP6	74	94.425	Carlito_syrichta
MGP_CAROLIEiJ_G0030424	-	91	85.965	ENSCAPG00000012399	RBBP6	76	79.571	Cavia_aperea
MGP_CAROLIEiJ_G0030424	-	100	94.805	ENSCPOG00000040025	RBBP6	71	93.681	Cavia_porcellus
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSCCAG00000023229	RBBP6	74	95.122	Cebus_capucinus
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSCATG00000033601	RBBP6	74	95.122	Cercocebus_atys
MGP_CAROLIEiJ_G0030424	-	100	95.065	ENSCLAG00000009872	RBBP6	67	93.956	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030424	-	100	96.623	ENSCSAG00000006609	RBBP6	66	95.055	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030424	-	96	74.124	ENSCPBG00000001818	RBBP6	71	75.275	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030424	-	100	97.143	ENSCANG00000039613	RBBP6	74	96.167	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSCGRG00001017193	Rbbp6	67	94.780	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSCGRG00000011887	Rbbp6	67	94.780	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030424	-	100	94.805	ENSDNOG00000048802	RBBP6	66	93.681	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030424	-	100	94.805	ENSDORG00000010285	Rbbp6	68	93.681	Dipodomys_ordii
MGP_CAROLIEiJ_G0030424	-	100	93.766	ENSEEUG00000001683	RBBP6	67	92.857	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030424	-	100	94.286	ENSFCAG00000043694	RBBP6	74	93.031	Felis_catus
MGP_CAROLIEiJ_G0030424	-	94	69.231	ENSFALG00000003750	RBBP6	67	71.883	Ficedula_albicollis
MGP_CAROLIEiJ_G0030424	-	100	93.766	ENSFDAG00000013132	RBBP6	66	92.582	Fukomys_damarensis
MGP_CAROLIEiJ_G0030424	-	95	71.164	ENSGALG00000006043	RBBP6	68	71.762	Gallus_gallus
MGP_CAROLIEiJ_G0030424	-	96	74.394	ENSGAGG00000004371	RBBP6	72	75.477	Gopherus_agassizii
MGP_CAROLIEiJ_G0030424	-	100	96.104	ENSGGOG00000007137	RBBP6	74	94.774	Gorilla_gorilla
MGP_CAROLIEiJ_G0030424	-	100	86.494	ENSHGLG00000008327	RBBP6	66	84.890	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030424	-	100	94.026	ENSHGLG00100007773	RBBP6	54	92.857	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030424	-	100	95.325	ENSSTOG00000016006	RBBP6	66	94.231	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030424	-	100	93.766	ENSJJAG00000014549	Rbbp6	70	93.407	Jaculus_jaculus
MGP_CAROLIEiJ_G0030424	-	99	61.578	ENSLACG00000012333	RBBP6	67	60.825	Latimeria_chalumnae
MGP_CAROLIEiJ_G0030424	-	96	62.198	ENSLOCG00000005487	RBBP6	66	61.957	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030424	-	100	94.026	ENSLAFG00000009528	RBBP6	66	92.857	Loxodonta_africana
MGP_CAROLIEiJ_G0030424	-	100	96.623	ENSMFAG00000038627	RBBP6	74	95.470	Macaca_fascicularis
MGP_CAROLIEiJ_G0030424	-	100	96.623	ENSMMUG00000015908	RBBP6	74	95.470	Macaca_mulatta
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSMNEG00000033630	RBBP6	74	95.470	Macaca_nemestrina
MGP_CAROLIEiJ_G0030424	-	100	96.623	ENSMLEG00000030073	RBBP6	74	95.470	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030424	-	100	68.408	ENSMGAG00000006423	RBBP6	70	74.064	Meleagris_gallopavo
MGP_CAROLIEiJ_G0030424	-	100	95.584	ENSMICG00000008059	RBBP6	74	94.774	Microcebus_murinus
MGP_CAROLIEiJ_G0030424	-	94	80.500	ENSMODG00000016318	-	66	80.250	Monodelphis_domestica
MGP_CAROLIEiJ_G0030424	-	100	99.221	ENSMUSG00000030779	Rbbp6	73	98.626	Mus_musculus
MGP_CAROLIEiJ_G0030424	-	100	97.403	MGP_PahariEiJ_G0013634	Rbbp6	73	95.879	Mus_pahari
MGP_CAROLIEiJ_G0030424	-	100	99.481	MGP_SPRETEiJ_G0031538	Rbbp6	75	98.901	Mus_spretus
MGP_CAROLIEiJ_G0030424	-	100	94.026	ENSMPUG00000012318	RBBP6	67	92.857	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030424	-	96	92.412	ENSMLUG00000010601	-	66	93.646	Myotis_lucifugus
MGP_CAROLIEiJ_G0030424	-	100	97.403	ENSNGAG00000002381	Rbbp6	68	95.879	Nannospalax_galili
MGP_CAROLIEiJ_G0030424	-	100	95.325	ENSNLEG00000011896	RBBP6	74	94.774	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030424	-	94	76.243	ENSMEUG00000014491	RBBP6	60	75.967	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030424	-	100	94.545	ENSODEG00000012319	RBBP6	67	93.407	Octodon_degus
MGP_CAROLIEiJ_G0030424	-	94	77.475	ENSOANG00000007673	RBBP6	67	77.723	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030424	-	98	91.755	ENSOCUG00000004346	RBBP6	70	91.755	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030424	-	100	95.065	ENSOGAG00000026986	RBBP6	66	93.956	Otolemur_garnettii
MGP_CAROLIEiJ_G0030424	-	96	93.834	ENSOARG00000017741	RBBP6	66	94.521	Ovis_aries
MGP_CAROLIEiJ_G0030424	-	94	95.580	ENSPPAG00000023595	RBBP6	68	95.304	Pan_paniscus
MGP_CAROLIEiJ_G0030424	-	100	94.026	ENSPPRG00000004074	RBBP6	74	92.683	Panthera_pardus
MGP_CAROLIEiJ_G0030424	-	100	94.026	ENSPTIG00000010342	RBBP6	74	92.683	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSPTRG00000007897	RBBP6	74	95.122	Pan_troglodytes
MGP_CAROLIEiJ_G0030424	-	100	96.623	ENSPANG00000019625	RBBP6	74	95.470	Papio_anubis
MGP_CAROLIEiJ_G0030424	-	95	74.324	ENSPSIG00000004108	RBBP6	71	74.114	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030424	-	94	88.950	ENSPCIG00000014000	RBBP6	66	88.674	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSPPYG00000007201	RBBP6	67	94.780	Pongo_abelii
MGP_CAROLIEiJ_G0030424	-	100	95.584	ENSPCOG00000021939	RBBP6	74	94.425	Propithecus_coquereli
MGP_CAROLIEiJ_G0030424	-	100	91.429	ENSPVAG00000001110	RBBP6	53	90.110	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030424	-	100	98.182	ENSRNOG00000012806	Rbbp6	70	96.703	Rattus_norvegicus
MGP_CAROLIEiJ_G0030424	-	100	88.312	ENSRBIG00000004517	RBBP6	76	89.199	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030424	-	100	96.623	ENSRROG00000032092	RBBP6	74	95.470	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030424	-	100	95.844	ENSSBOG00000021666	RBBP6	75	95.122	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030424	-	98	87.003	ENSSHAG00000004727	-	66	88.643	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030424	-	89	57.923	ENSSFOG00015014316	RBBP6	66	59.459	Scleropages_formosus
MGP_CAROLIEiJ_G0030424	-	100	93.766	ENSSARG00000004977	RBBP6	69	92.582	Sorex_araneus
MGP_CAROLIEiJ_G0030424	-	65	82.677	ENSSPUG00000010682	RBBP6	78	76.042	Sphenodon_punctatus
MGP_CAROLIEiJ_G0030424	-	100	94.286	ENSSSCG00000007830	RBBP6	67	93.407	Sus_scrofa
MGP_CAROLIEiJ_G0030424	-	98	67.939	ENSTGUG00000006185	RBBP6	68	72.533	Taeniopygia_guttata
MGP_CAROLIEiJ_G0030424	-	100	94.286	ENSTTRG00000002696	RBBP6	66	93.132	Tursiops_truncatus
MGP_CAROLIEiJ_G0030424	-	100	94.286	ENSUMAG00000008537	RBBP6	67	93.132	Ursus_maritimus
MGP_CAROLIEiJ_G0030424	-	100	94.805	ENSVVUG00000005484	RBBP6	67	93.681	Vulpes_vulpes