EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030449 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 3449 bases
Position: chr7:128502646-128506094
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0082137	GTP_EFTU	PF00009.27	2.9e-54	1	1
MGP_CAROLIEiJ_P0082137	GTP_EFTU_D2	PF03144.25	8.8e-15	1	1
MGP_CAROLIEiJ_P0082137	GTP_EFTU_D3	PF03143.17	2.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0082137	-	1732	-	MGP_CAROLIEiJ_P0082137	452 (aa)	-	UPI000A31852F

Gene Model

Click here to download MGP_CAROLIEiJ_G0030449's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0030449	-	52	33.818	MGP_CAROLIEiJ_G0024797	-	91	33.818
MGP_CAROLIEiJ_G0030449	-	100	100.000	MGP_CAROLIEiJ_G0030448	-	100	100.000
MGP_CAROLIEiJ_G0030449	-	51	30.252	MGP_CAROLIEiJ_G0027274	Guf1	73	30.252
MGP_CAROLIEiJ_G0030449	-	52	31.381	MGP_CAROLIEiJ_G0016158	Mtif2	52	30.962

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030449	-	99	94.013	ENSG00000178952	TUFM	99	94.013	Homo_sapiens
MGP_CAROLIEiJ_G0030449	-	92	78.365	ENSAPOG00000013385	tufm	99	74.945	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0030449	-	100	94.493	ENSAMEG00000015551	TUFM	100	94.493	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030449	-	92	78.177	ENSACIG00000007388	tufm	96	78.177	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0030449	-	92	78.606	ENSAOCG00000001032	tufm	96	79.126	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0030449	-	92	78.606	ENSAPEG00000015751	tufm	97	78.417	Amphiprion_percula
MGP_CAROLIEiJ_G0030449	-	93	76.960	ENSATEG00000002905	tufm	97	74.058	Anabas_testudineus
MGP_CAROLIEiJ_G0030449	-	97	79.864	ENSACAG00000005399	TUFM	96	79.864	Anolis_carolinensis
MGP_CAROLIEiJ_G0030449	-	100	92.699	ENSANAG00000022206	TUFM	99	92.699	Aotus_nancymaae
MGP_CAROLIEiJ_G0030449	-	91	78.832	ENSACLG00000007403	tufm	93	74.501	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030449	-	100	94.912	ENSBTAG00000019216	TUFM	100	94.912	Bos_taurus
MGP_CAROLIEiJ_G0030449	-	91	56.295	WBGene00007000	tufm-1	84	56.295	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0030449	-	100	92.920	ENSCJAG00000006236	TUFM	99	92.920	Callithrix_jacchus
MGP_CAROLIEiJ_G0030449	-	100	94.912	ENSCAFG00000017216	TUFM	100	94.912	Canis_familiaris
MGP_CAROLIEiJ_G0030449	-	100	94.912	ENSCAFG00020017574	TUFM	100	94.912	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030449	-	100	95.133	ENSCHIG00000020583	TUFM	100	95.133	Capra_hircus
MGP_CAROLIEiJ_G0030449	-	99	95.122	ENSTSYG00000026053	TUFM	99	95.122	Carlito_syrichta
MGP_CAROLIEiJ_G0030449	-	100	95.796	ENSCPOG00000010534	TUFM	100	95.796	Cavia_porcellus
MGP_CAROLIEiJ_G0030449	-	100	92.478	ENSCCAG00000033296	TUFM	99	92.478	Cebus_capucinus
MGP_CAROLIEiJ_G0030449	-	100	93.142	ENSCATG00000035822	TUFM	99	93.142	Cercocebus_atys
MGP_CAROLIEiJ_G0030449	-	100	94.912	ENSCLAG00000013969	TUFM	100	94.912	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030449	-	100	93.142	ENSCSAG00000006314	TUFM	99	93.142	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030449	-	99	93.792	ENSCHOG00000009077	TUFM	99	93.792	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030449	-	99	76.652	ENSCPBG00000003874	TUFM	99	76.652	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030449	-	89	58.706	ENSCING00000002841	-	93	58.706	Ciona_intestinalis
MGP_CAROLIEiJ_G0030449	-	91	56.068	ENSCSAVG00000009380	-	90	56.068	Ciona_savignyi
MGP_CAROLIEiJ_G0030449	-	99	93.348	ENSCANG00000035829	TUFM	99	93.348	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030449	-	100	97.124	ENSCGRG00001022949	Tufm	100	97.124	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030449	-	100	97.124	ENSCGRG00000001868	-	100	97.124	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030449	-	100	68.202	ENSCGRG00000013193	-	100	68.202	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030449	-	92	77.218	ENSCSEG00000013841	tufm	97	77.218	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0030449	-	99	74.501	ENSCVAG00000006251	tufm	98	78.043	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0030449	-	99	73.378	ENSDARG00000104173	tufm	99	73.378	Danio_rerio
MGP_CAROLIEiJ_G0030449	-	99	91.353	ENSDNOG00000047636	TUFM	99	91.353	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030449	-	100	75.442	ENSDORG00000023544	-	100	75.442	Dipodomys_ordii
MGP_CAROLIEiJ_G0030449	-	99	63.496	FBgn0024556	mEFTu1	91	63.496	Drosophila_melanogaster
MGP_CAROLIEiJ_G0030449	-	87	80.000	ENSETEG00000009601	TUFM	99	80.000	Echinops_telfairi
MGP_CAROLIEiJ_G0030449	-	96	67.972	ENSEBUG00000015907	tufm	71	68.203	Eptatretus_burgeri
MGP_CAROLIEiJ_G0030449	-	100	95.796	ENSEASG00005015477	TUFM	99	95.796	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030449	-	100	95.796	ENSECAG00000019763	TUFM	100	95.796	Equus_caballus
MGP_CAROLIEiJ_G0030449	-	87	89.873	ENSEEUG00000001402	TUFM	99	89.873	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030449	-	99	75.938	ENSELUG00000013410	tufm	96	75.938	Esox_lucius
MGP_CAROLIEiJ_G0030449	-	99	94.855	ENSFCAG00000003103	TUFM	65	94.690	Felis_catus
MGP_CAROLIEiJ_G0030449	-	88	89.724	ENSFDAG00000010881	TUFM	100	93.038	Fukomys_damarensis
MGP_CAROLIEiJ_G0030449	-	92	72.662	ENSFHEG00000020646	tufm	98	69.507	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0030449	-	99	75.831	ENSGMOG00000014616	tufm	99	75.831	Gadus_morhua
MGP_CAROLIEiJ_G0030449	-	99	74.501	ENSGAFG00000004682	tufm	98	77.197	Gambusia_affinis
MGP_CAROLIEiJ_G0030449	-	93	78.147	ENSGACG00000012961	tufm	99	75.388	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0030449	-	99	79.287	ENSGAGG00000006132	TUFM	99	83.623	Gopherus_agassizii
MGP_CAROLIEiJ_G0030449	-	99	93.792	ENSGGOG00000014136	TUFM	99	93.792	Gorilla_gorilla
MGP_CAROLIEiJ_G0030449	-	93	77.672	ENSHBUG00000019031	tufm	90	78.177	Haplochromis_burtoni
MGP_CAROLIEiJ_G0030449	-	99	92.905	ENSHGLG00000006613	TUFM	99	92.905	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030449	-	99	89.135	ENSHGLG00100004096	TUFM	99	89.135	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030449	-	99	75.839	ENSHCOG00000014418	tufm	99	78.505	Hippocampus_comes
MGP_CAROLIEiJ_G0030449	-	93	78.571	ENSIPUG00000022457	tufm	99	75.166	Ictalurus_punctatus
MGP_CAROLIEiJ_G0030449	-	98	42.605	ENSIPUG00000020682	-	89	50.476	Ictalurus_punctatus
MGP_CAROLIEiJ_G0030449	-	100	95.575	ENSSTOG00000011837	TUFM	100	95.575	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030449	-	100	95.354	ENSJJAG00000011840	Tufm	100	95.354	Jaculus_jaculus
MGP_CAROLIEiJ_G0030449	-	99	75.388	ENSKMAG00000009794	tufm	99	75.388	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0030449	-	92	78.177	ENSLBEG00000023735	tufm	97	78.177	Labrus_bergylta
MGP_CAROLIEiJ_G0030449	-	91	80.292	ENSLACG00000008242	TUFM	91	80.292	Latimeria_chalumnae
MGP_CAROLIEiJ_G0030449	-	99	91.256	ENSLAFG00000028911	TUFM	99	91.256	Loxodonta_africana
MGP_CAROLIEiJ_G0030449	-	99	93.126	ENSMFAG00000033739	TUFM	99	93.126	Macaca_fascicularis
MGP_CAROLIEiJ_G0030449	-	99	93.348	ENSMMUG00000003303	TUFM	99	93.348	Macaca_mulatta
MGP_CAROLIEiJ_G0030449	-	99	93.348	ENSMNEG00000006031	TUFM	99	93.348	Macaca_nemestrina
MGP_CAROLIEiJ_G0030449	-	100	93.142	ENSMLEG00000042133	TUFM	99	93.142	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030449	-	93	78.147	ENSMAMG00000002053	tufm	99	75.388	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030449	-	93	77.672	ENSMZEG00005010857	tufm	93	74.723	Maylandia_zebra
MGP_CAROLIEiJ_G0030449	-	100	97.124	ENSMAUG00000010490	Tufm	100	97.124	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030449	-	100	93.805	ENSMICG00000007650	TUFM	100	93.805	Microcebus_murinus
MGP_CAROLIEiJ_G0030449	-	100	96.903	ENSMOCG00000010051	Tufm	100	96.903	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030449	-	98	73.696	ENSMMOG00000012344	tufm	96	73.696	Mola_mola
MGP_CAROLIEiJ_G0030449	-	99	86.414	ENSMODG00000015564	TUFM	99	86.414	Monodelphis_domestica
MGP_CAROLIEiJ_G0030449	-	99	73.826	ENSMALG00000020254	tufm	99	73.826	Monopterus_albus
MGP_CAROLIEiJ_G0030449	-	100	99.558	ENSMUSG00000073838	Tufm	100	99.558	Mus_musculus
MGP_CAROLIEiJ_G0030449	-	100	99.336	MGP_PahariEiJ_G0013658	-	100	99.336	Mus_pahari
MGP_CAROLIEiJ_G0030449	-	100	99.336	MGP_PahariEiJ_G0013659	-	100	99.336	Mus_pahari
MGP_CAROLIEiJ_G0030449	-	100	99.558	MGP_SPRETEiJ_G0031562	-	100	99.558	Mus_spretus
MGP_CAROLIEiJ_G0030449	-	100	92.025	MGP_SPRETEiJ_G0031563	-	100	92.025	Mus_spretus
MGP_CAROLIEiJ_G0030449	-	82	96.226	ENSMPUG00000012816	TUFM	98	96.226	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030449	-	100	95.133	ENSMLUG00000012335	-	100	95.133	Myotis_lucifugus
MGP_CAROLIEiJ_G0030449	-	100	96.903	ENSNGAG00000008610	Tufm	100	96.903	Nannospalax_galili
MGP_CAROLIEiJ_G0030449	-	81	78.082	ENSNBRG00000006466	tufm	96	78.453	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030449	-	99	89.159	ENSNLEG00000011063	TUFM	99	89.159	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030449	-	77	91.354	ENSMEUG00000011131	TUFM	100	91.354	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030449	-	99	82.483	ENSOPRG00000002318	-	99	82.483	Ochotona_princeps
MGP_CAROLIEiJ_G0030449	-	93	77.910	ENSONIG00000019389	tufm	99	74.945	Oreochromis_niloticus
MGP_CAROLIEiJ_G0030449	-	96	87.816	ENSOANG00000013114	TUFM	99	87.816	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030449	-	98	95.281	ENSOCUG00000002683	TUFM	99	95.143	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030449	-	99	73.614	ENSORLG00000011497	tufm	99	73.614	Oryzias_latipes
MGP_CAROLIEiJ_G0030449	-	99	73.836	ENSORLG00020013437	tufm	99	73.836	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0030449	-	99	73.614	ENSORLG00015003107	tufm	99	73.614	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0030449	-	99	74.279	ENSOMEG00000016958	tufm	99	74.279	Oryzias_melastigma
MGP_CAROLIEiJ_G0030449	-	100	94.248	ENSOGAG00000006875	TUFM	100	94.248	Otolemur_garnettii
MGP_CAROLIEiJ_G0030449	-	92	94.686	ENSOARG00000002357	TUFM	100	94.686	Ovis_aries
MGP_CAROLIEiJ_G0030449	-	99	93.792	ENSPPAG00000035168	TUFM	99	93.792	Pan_paniscus
MGP_CAROLIEiJ_G0030449	-	98	94.831	ENSPPRG00000014248	TUFM	99	94.690	Panthera_pardus
MGP_CAROLIEiJ_G0030449	-	93	95.261	ENSPTIG00000009980	TUFM	99	95.261	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030449	-	99	94.013	ENSPTRG00000007939	TUFM	99	94.013	Pan_troglodytes
MGP_CAROLIEiJ_G0030449	-	99	93.570	ENSPANG00000019624	TUFM	99	93.570	Papio_anubis
MGP_CAROLIEiJ_G0030449	-	93	76.777	ENSPKIG00000023809	tufm	93	76.777	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030449	-	67	81.728	ENSPSIG00000005302	TUFM	96	81.728	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030449	-	92	77.698	ENSPMGG00000015631	tufm	99	77.698	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0030449	-	100	97.566	ENSPEMG00000012208	Tufm	100	97.566	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030449	-	100	84.868	ENSPCIG00000025208	TUFM	100	84.868	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030449	-	99	73.438	ENSPFOG00000007043	tufm	99	73.438	Poecilia_formosa
MGP_CAROLIEiJ_G0030449	-	96	75.113	ENSPLAG00000014372	tufm	99	75.113	Poecilia_latipinna
MGP_CAROLIEiJ_G0030449	-	99	73.661	ENSPMEG00000014520	-	99	73.661	Poecilia_mexicana
MGP_CAROLIEiJ_G0030449	-	99	73.438	ENSPMEG00000019508	tufm	99	74.887	Poecilia_mexicana
MGP_CAROLIEiJ_G0030449	-	93	76.722	ENSPREG00000013913	tufm	99	74.058	Poecilia_reticulata
MGP_CAROLIEiJ_G0030449	-	100	93.142	ENSPPYG00000007226	TUFM	99	93.142	Pongo_abelii
MGP_CAROLIEiJ_G0030449	-	99	86.283	ENSPCAG00000015294	TUFM	99	86.283	Procavia_capensis
MGP_CAROLIEiJ_G0030449	-	100	93.805	ENSPCOG00000012267	TUFM	99	93.805	Propithecus_coquereli
MGP_CAROLIEiJ_G0030449	-	50	95.238	ENSPVAG00000003960	-	50	95.238	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030449	-	92	77.938	ENSPNYG00000008905	tufm	99	74.944	Pundamilia_nyererei
MGP_CAROLIEiJ_G0030449	-	92	79.137	ENSPNAG00000018881	tufm	99	75.610	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0030449	-	100	99.336	ENSRNOG00000018604	Tufm	100	99.336	Rattus_norvegicus
MGP_CAROLIEiJ_G0030449	-	99	88.938	ENSRBIG00000042008	-	99	88.938	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030449	-	56	94.094	ENSRBIG00000036713	-	93	94.094	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030449	-	99	93.348	ENSRROG00000036858	-	99	93.348	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030449	-	67	91.749	ENSRROG00000044977	-	82	91.749	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030449	-	86	61.168	YOR187W	TUF1	90	61.168	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0030449	-	99	91.091	ENSSBOG00000026542	TUFM	99	91.091	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030449	-	95	88.889	ENSSHAG00000012121	TUFM	100	88.889	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030449	-	92	76.978	ENSSFOG00015013352	tufm	94	76.978	Scleropages_formosus
MGP_CAROLIEiJ_G0030449	-	99	75.166	ENSSMAG00000010053	tufm	99	75.166	Scophthalmus_maximus
MGP_CAROLIEiJ_G0030449	-	92	77.938	ENSSDUG00000016896	tufm	99	74.723	Seriola_dumerili
MGP_CAROLIEiJ_G0030449	-	96	75.854	ENSSLDG00000006494	tufm	99	75.854	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0030449	-	84	94.474	ENSSARG00000011228	TUFM	100	94.474	Sorex_araneus
MGP_CAROLIEiJ_G0030449	-	92	72.662	ENSSPUG00000016312	TUFM	96	72.662	Sphenodon_punctatus
MGP_CAROLIEiJ_G0030449	-	96	76.267	ENSSPAG00000009936	tufm	98	75.561	Stegastes_partitus
MGP_CAROLIEiJ_G0030449	-	100	95.133	ENSSSCG00000007803	TUFM	100	95.133	Sus_scrofa
MGP_CAROLIEiJ_G0030449	-	99	75.166	ENSTRUG00000008300	tufm	99	75.166	Takifugu_rubripes
MGP_CAROLIEiJ_G0030449	-	100	90.330	ENSTBEG00000015029	TUFM	99	90.989	Tupaia_belangeri
MGP_CAROLIEiJ_G0030449	-	57	93.411	ENSTTRG00000005930	-	57	93.411	Tursiops_truncatus
MGP_CAROLIEiJ_G0030449	-	61	95.273	ENSTTRG00000001980	-	100	95.273	Tursiops_truncatus
MGP_CAROLIEiJ_G0030449	-	99	93.570	ENSUAMG00000001471	TUFM	99	93.570	Ursus_americanus
MGP_CAROLIEiJ_G0030449	-	90	96.296	ENSUMAG00000009341	TUFM	99	96.296	Ursus_maritimus
MGP_CAROLIEiJ_G0030449	-	61	94.909	ENSVPAG00000009541	TUFM	100	94.909	Vicugna_pacos
MGP_CAROLIEiJ_G0030449	-	100	94.912	ENSVVUG00000024170	TUFM	100	94.912	Vulpes_vulpes
MGP_CAROLIEiJ_G0030449	-	83	48.187	ENSXETG00000028019	-	68	85.106	Xenopus_tropicalis
MGP_CAROLIEiJ_G0030449	-	92	77.938	ENSXMAG00000011848	tufm	96	77.938	Xiphophorus_maculatus