EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030451 (Gene tree)
Gene ID: 110297423
Gene Symbol: Eif3c
Alias: 110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|Xs|Xsl
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 19818 bases
Position: chr7:128557507-128577324
Accession: 110297423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0082148	eIF-3c_N	PF05470.12	2.9e-268	1	1
MGP_CAROLIEiJ_P0082149	eIF-3c_N	PF05470.12	1.3e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0082149	-	926	-	MGP_CAROLIEiJ_P0082149	249 (aa)	-	-
MGP_CAROLIEiJ_T0082148	-	3398	-	MGP_CAROLIEiJ_P0082148	911 (aa)	XP_021021821	UPI000A317562
MGP_CAROLIEiJ_T0082150	-	480	-	MGP_CAROLIEiJ_P0082150	66 (aa)	-	UPI000719A207

Gene Model

Click here to download MGP_CAROLIEiJ_G0030451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030451's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.608	ENSG00000205609	EIF3CL	100	96.608	Homo_sapiens
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.714	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.599	ENSAPOG00000024092	eif3c	92	83.524	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.262	ENSAMEG00000015454	-	100	97.262	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030451	Eif3c	99	72.767	ENSACIG00000015082	eif3c	93	83.223	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0030451	Eif3c	67	60.355	ENSAOCG00000024752	-	55	66.234	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0030451	Eif3c	94	83.333	ENSAOCG00000021466	eif3c	94	83.333	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0030451	Eif3c	94	83.333	ENSAPEG00000010521	eif3c	94	83.333	Amphiprion_percula
MGP_CAROLIEiJ_G0030451	Eif3c	61	64.286	ENSAPEG00000023503	-	62	66.883	Amphiprion_percula
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.190	ENSATEG00000019001	eif3c	98	75.626	Anabas_testudineus
MGP_CAROLIEiJ_G0030451	Eif3c	100	85.371	ENSACAG00000005937	-	100	85.590	Anolis_carolinensis
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSANAG00000020640	-	100	96.605	Aotus_nancymaae
MGP_CAROLIEiJ_G0030451	Eif3c	84	80.130	ENSACLG00000009322	eif3c	92	80.130	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030451	Eif3c	84	82.975	ENSACLG00000009347	eif3c	98	82.975	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.604	ENSAMXG00000020949	eif3c	98	75.519	Astyanax_mexicanus
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.833	ENSBTAG00000006543	EIF3CL	100	95.833	Bos_taurus
MGP_CAROLIEiJ_G0030451	Eif3c	99	42.026	WBGene00001226	eif-3.C	97	42.519	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.495	ENSCJAG00000006341	-	100	96.495	Callithrix_jacchus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSCAFG00000017143	-	100	97.043	Canis_familiaris
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.152	ENSCAFG00020017587	-	100	97.152	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.833	ENSCHIG00000024795	-	100	95.833	Capra_hircus
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.276	ENSTSYG00000003486	-	100	96.276	Carlito_syrichta
MGP_CAROLIEiJ_G0030451	Eif3c	96	86.750	ENSCAPG00000015887	-	100	88.109	Cavia_aperea
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.481	ENSCPOG00000007533	-	100	97.481	Cavia_porcellus
MGP_CAROLIEiJ_G0030451	Eif3c	99	82.029	ENSCCAG00000029099	-	99	80.947	Cebus_capucinus
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.455	ENSCCAG00000034928	-	100	95.455	Cebus_capucinus
MGP_CAROLIEiJ_G0030451	Eif3c	100	91.238	ENSCCAG00000027724	-	100	90.471	Cebus_capucinus
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSCATG00000032673	-	100	96.605	Cercocebus_atys
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.276	ENSCLAG00000011094	-	100	96.386	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSCSAG00000006297	-	100	96.605	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030451	Eif3c	55	79.923	ENSCHOG00000003120	-	88	79.923	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030451	Eif3c	71	92.038	ENSCPBG00000012407	-	92	80.982	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030451	Eif3c	79	55.822	ENSCSAVG00000006744	-	96	56.491	Ciona_savignyi
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSCANG00000033626	-	100	96.605	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030451	Eif3c	100	98.136	ENSCGRG00001015265	EIF3C	100	98.136	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030451	Eif3c	100	91.600	ENSCGRG00000006124	-	100	91.600	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030451	Eif3c	100	73.880	ENSCSEG00000017770	eif3c	100	73.989	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.700	ENSCVAG00000005402	eif3c	98	81.169	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.563	ENSDARG00000016443	eif3c	98	74.646	Danio_rerio
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSDNOG00000031497	-	100	96.605	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.371	ENSDORG00000016471	Eif3c	100	97.371	Dipodomys_ordii
MGP_CAROLIEiJ_G0030451	Eif3c	66	56.860	FBgn0034258	eIF3c	95	50.443	Drosophila_melanogaster
MGP_CAROLIEiJ_G0030451	Eif3c	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
MGP_CAROLIEiJ_G0030451	Eif3c	99	62.836	ENSEBUG00000001629	eif3c	99	63.578	Eptatretus_burgeri
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSECAG00000008746	-	100	97.043	Equus_caballus
MGP_CAROLIEiJ_G0030451	Eif3c	65	63.435	ENSEEUG00000000726	-	64	63.435	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030451	Eif3c	87	95.739	ENSEEUG00000006148	-	100	95.739	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.074	ENSELUG00000022257	eif3c	92	82.421	Esox_lucius
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.933	ENSFCAG00000015782	-	100	96.933	Felis_catus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSFDAG00000003588	-	100	97.043	Fukomys_damarensis
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.109	ENSFHEG00000014154	EIF3C	98	75.461	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0030451	Eif3c	97	73.513	ENSGMOG00000016885	eif3c	99	74.887	Gadus_morhua
MGP_CAROLIEiJ_G0030451	Eif3c	59	82.051	ENSGALG00000047139	-	65	84.694	Gallus_gallus
MGP_CAROLIEiJ_G0030451	Eif3c	96	75.823	ENSGACG00000007652	eif3c	100	75.109	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0030451	Eif3c	92	82.388	ENSGAGG00000006666	-	100	82.742	Gopherus_agassizii
MGP_CAROLIEiJ_G0030451	Eif3c	99	94.286	ENSGGOG00000026919	EIF3C	100	96.587	Gorilla_gorilla
MGP_CAROLIEiJ_G0030451	Eif3c	72	95.580	ENSGGOG00000022677	-	100	94.981	Gorilla_gorilla
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSHGLG00000011445	EIF3C	100	97.043	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSHGLG00100000217	EIF3C	100	97.043	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.109	ENSHCOG00000019694	eif3c	98	75.109	Hippocampus_comes
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.783	ENSIPUG00000016878	eif3c	98	75.490	Ictalurus_punctatus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSSTOG00000021278	-	100	97.043	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.933	ENSJJAG00000012722	Eif3c	100	96.933	Jaculus_jaculus
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.658	ENSKMAG00000021662	eif3c	97	74.919	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.447	ENSLBEG00000023370	eif3c	99	73.758	Labrus_bergylta
MGP_CAROLIEiJ_G0030451	Eif3c	100	77.511	ENSLACG00000000770	eif3c	100	79.171	Latimeria_chalumnae
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.057	ENSLAFG00000027426	-	100	96.057	Loxodonta_africana
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSMFAG00000041930	-	100	96.605	Macaca_fascicularis
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSMMUG00000011798	-	100	96.605	Macaca_mulatta
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSMNEG00000023915	-	100	96.605	Macaca_nemestrina
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSMLEG00000027529	-	100	96.605	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030451	Eif3c	99	77.794	ENSMAMG00000012512	eif3c	95	83.833	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030451	Eif3c	84	80.293	ENSMZEG00005013685	eif3c	92	80.293	Maylandia_zebra
MGP_CAROLIEiJ_G0030451	Eif3c	99	71.996	ENSMZEG00005013699	eif3c	96	82.975	Maylandia_zebra
MGP_CAROLIEiJ_G0030451	Eif3c	100	98.246	ENSMAUG00000010621	Eif3c	100	98.246	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.495	ENSMICG00000036748	-	100	96.495	Microcebus_murinus
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.833	ENSMOCG00000004204	Eif3c	100	95.943	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030451	Eif3c	100	71.162	ENSMMOG00000001572	eif3c	72	82.178	Mola_mola
MGP_CAROLIEiJ_G0030451	Eif3c	100	93.654	ENSMODG00000015579	-	100	93.654	Monodelphis_domestica
MGP_CAROLIEiJ_G0030451	Eif3c	84	83.748	ENSMALG00000008907	eif3c	92	83.609	Monopterus_albus
MGP_CAROLIEiJ_G0030451	Eif3c	100	100.000	ENSMUSG00000030738	Eif3c	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0030451	Eif3c	100	100.000	MGP_PahariEiJ_G0013661	Eif3c	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0030451	Eif3c	100	100.000	MGP_SPRETEiJ_G0031565	Eif3c	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0030451	Eif3c	96	96.591	ENSMPUG00000012732	-	100	96.591	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.838	ENSMLUG00000015558	-	100	95.947	Myotis_lucifugus
MGP_CAROLIEiJ_G0030451	Eif3c	93	89.091	ENSNGAG00000010901	-	98	89.091	Nannospalax_galili
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.919	ENSNGAG00000007177	-	100	97.919	Nannospalax_galili
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.455	ENSNLEG00000001425	-	100	95.455	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030451	Eif3c	89	60.897	ENSMEUG00000005317	-	100	58.333	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030451	Eif3c	100	76.175	ENSMEUG00000009939	-	99	76.747	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSOPRG00000000931	-	100	96.605	Ochotona_princeps
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.824	ENSODEG00000013508	-	100	96.824	Octodon_degus
MGP_CAROLIEiJ_G0030451	Eif3c	66	62.706	ENSONIG00000011434	eif3c	99	62.706	Oreochromis_niloticus
MGP_CAROLIEiJ_G0030451	Eif3c	100	89.440	ENSOANG00000011410	-	100	90.194	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSOCUG00000022489	-	100	97.043	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.169	ENSORLG00000006318	eif3c	98	71.669	Oryzias_latipes
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.169	ENSORLG00020015713	eif3c	95	82.034	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.058	ENSORLG00015013772	eif3c	97	73.620	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0030451	Eif3c	100	74.246	ENSOMEG00000020450	eif3c	100	74.030	Oryzias_melastigma
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.386	ENSOGAG00000012737	-	100	96.386	Otolemur_garnettii
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.833	ENSOARG00000002892	-	100	95.833	Ovis_aries
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.933	ENSPPRG00000012336	-	100	96.933	Panthera_pardus
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.933	ENSPTIG00000011712	-	100	96.933	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSPANG00000021151	-	100	96.605	Papio_anubis
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.163	ENSPKIG00000002049	eif3c	98	75.490	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030451	Eif3c	89	83.914	ENSPMGG00000005409	eif3c	94	83.914	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.616	ENSPEMG00000010899	Eif3c	100	96.616	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030451	Eif3c	100	92.998	ENSPCIG00000025206	-	100	93.764	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.565	ENSPFOG00000004476	eif3c	98	74.538	Poecilia_formosa
MGP_CAROLIEiJ_G0030451	Eif3c	100	71.225	ENSPLAG00000017480	eif3c	95	83.085	Poecilia_latipinna
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.190	ENSPMEG00000019512	eif3c	98	74.728	Poecilia_mexicana
MGP_CAROLIEiJ_G0030451	Eif3c	100	71.116	ENSPREG00000023139	eif3c	100	71.491	Poecilia_reticulata
MGP_CAROLIEiJ_G0030451	Eif3c	100	93.538	ENSPPYG00000007227	-	100	93.538	Pongo_abelii
MGP_CAROLIEiJ_G0030451	Eif3c	66	97.338	ENSPCAG00000012710	-	100	97.338	Procavia_capensis
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.824	ENSPCOG00000019289	-	100	96.824	Propithecus_coquereli
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.714	ENSPVAG00000005804	-	100	96.714	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030451	Eif3c	86	52.632	ENSPNYG00000016530	eif3c	81	79.394	Pundamilia_nyererei
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.711	ENSPNAG00000024040	eif3c	99	75.956	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0030451	Eif3c	100	99.012	ENSRNOG00000018761	Eif3c	100	99.012	Rattus_norvegicus
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.455	ENSRBIG00000044009	-	100	95.455	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSRROG00000043626	-	100	96.605	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030451	Eif3c	70	30.970	YMR309C	-	81	30.297	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSSBOG00000032155	-	100	96.605	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030451	Eif3c	96	92.525	ENSSHAG00000011808	-	100	93.318	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030451	Eif3c	99	74.836	ENSSFOG00015021823	eif3c	98	75.437	Scleropages_formosus
MGP_CAROLIEiJ_G0030451	Eif3c	97	75.816	ENSSMAG00000016638	eif3c	97	75.928	Scophthalmus_maximus
MGP_CAROLIEiJ_G0030451	Eif3c	98	78.686	ENSSDUG00000023117	eif3c	98	75.682	Seriola_dumerili
MGP_CAROLIEiJ_G0030451	Eif3c	99	75.682	ENSSLDG00000009706	eif3c	93	83.170	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0030451	Eif3c	100	83.807	ENSSPUG00000016470	-	100	83.917	Sphenodon_punctatus
MGP_CAROLIEiJ_G0030451	Eif3c	100	75.517	ENSSPAG00000000426	eif3c	100	75.299	Stegastes_partitus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	ENSSSCG00000034927	-	100	97.043	Sus_scrofa
MGP_CAROLIEiJ_G0030451	Eif3c	99	73.498	ENSTRUG00000008951	eif3c	99	73.820	Takifugu_rubripes
MGP_CAROLIEiJ_G0030451	Eif3c	100	73.232	ENSTNIG00000015210	eif3c	100	73.781	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0030451	Eif3c	100	96.605	ENSTTRG00000005880	-	100	96.605	Tursiops_truncatus
MGP_CAROLIEiJ_G0030451	Eif3c	72	98.015	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
MGP_CAROLIEiJ_G0030451	Eif3c	100	97.152	ENSUMAG00000010927	-	100	97.152	Ursus_maritimus
MGP_CAROLIEiJ_G0030451	Eif3c	100	95.619	ENSVVUG00000025970	-	100	95.619	Vulpes_vulpes
MGP_CAROLIEiJ_G0030451	Eif3c	100	77.056	ENSXETG00000002941	eif3c	100	77.405	Xenopus_tropicalis
MGP_CAROLIEiJ_G0030451	Eif3c	100	74.486	ENSXMAG00000013796	eif3c	100	74.162	Xiphophorus_maculatus