EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030492 (Gene tree)
Gene ID: 110297589
Gene Symbol: Sept1
Alias: Diff6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 17871 bases
Position: chr7:129259665-129277535
Accession: 110297589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0082395	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_CAROLIEiJ_P0082394	MMR_HSR1	PF01926.23	3.6e-08	1	1
MGP_CAROLIEiJ_P0082392	MMR_HSR1	PF01926.23	5.2e-08	1	1
MGP_CAROLIEiJ_P0082391	MMR_HSR1	PF01926.23	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0082398	-	706	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0082390	-	576	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0082391	-	1101	-	MGP_CAROLIEiJ_P0082391	366 (aa)	XP_021022074	UPI000A31A3E3
MGP_CAROLIEiJ_T0082392	-	1048	-	MGP_CAROLIEiJ_P0082392	328 (aa)	-	-
MGP_CAROLIEiJ_T0082393	-	789	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0082394	-	706	-	MGP_CAROLIEiJ_P0082394	186 (aa)	-	-
MGP_CAROLIEiJ_T0082395	-	599	-	MGP_CAROLIEiJ_P0082395	145 (aa)	-	-
MGP_CAROLIEiJ_T0082396	-	809	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0082397	-	242	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0030492	Sept1	100	64.828	MGP_CAROLIEiJ_G0014457	-	100	60.748
MGP_CAROLIEiJ_G0030492	Sept1	100	68.276	MGP_CAROLIEiJ_G0020551	-	93	63.352
MGP_CAROLIEiJ_G0030492	Sept1	100	66.897	MGP_CAROLIEiJ_G0016931	Sept4	94	66.514
MGP_CAROLIEiJ_G0030492	Sept1	100	38.776	MGP_CAROLIEiJ_G0032996	Sept6	76	40.469
MGP_CAROLIEiJ_G0030492	Sept1	100	43.537	MGP_CAROLIEiJ_G0015340	Sept10	71	39.744
MGP_CAROLIEiJ_G0030492	Sept1	100	47.945	MGP_CAROLIEiJ_G0020416	Sept12	77	43.775
MGP_CAROLIEiJ_G0030492	Sept1	100	38.095	MGP_CAROLIEiJ_G0016340	Sept8	76	36.499
MGP_CAROLIEiJ_G0030492	Sept1	100	40.816	MGP_CAROLIEiJ_G0027424	Sept11	76	40.469
MGP_CAROLIEiJ_G0030492	Sept1	100	40.816	MGP_CAROLIEiJ_G0027783	Sept14	82	38.082
MGP_CAROLIEiJ_G0030492	Sept1	100	59.310	MGP_CAROLIEiJ_G0031917	Sept7	73	50.291
MGP_CAROLIEiJ_G0030492	Sept1	100	50.000	MGP_CAROLIEiJ_G0017463	Sept9	83	45.500
MGP_CAROLIEiJ_G0030492	Sept1	100	50.685	MGP_CAROLIEiJ_G0020078	Sept3	86	45.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSG00000180096	SEPT1	87	98.361	Homo_sapiens
MGP_CAROLIEiJ_G0030492	Sept1	99	92.916	ENSAMEG00000007865	SEPT1	99	92.916	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSANAG00000029084	SEPT1	100	94.823	Aotus_nancymaae
MGP_CAROLIEiJ_G0030492	Sept1	100	96.552	ENSBTAG00000021219	SEPT1	100	95.095	Bos_taurus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSCJAG00000002577	SEPT1	89	93.460	Callithrix_jacchus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSCAFG00000016576	SEPT1	99	94.262	Canis_familiaris
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSCAFG00020017813	SEPT1	99	94.262	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030492	Sept1	100	92.267	ENSCHIG00000017447	SEPT1	100	92.267	Capra_hircus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSTSYG00000035596	SEPT1	100	93.460	Carlito_syrichta
MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	ENSCAPG00000001347	SEPT1	99	80.909	Cavia_aperea
MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	ENSCPOG00000003088	SEPT1	99	91.281	Cavia_porcellus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSCCAG00000030164	SEPT1	89	83.476	Cebus_capucinus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSCATG00000037250	SEPT1	99	95.095	Cercocebus_atys
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSCLAG00000010486	SEPT1	100	93.235	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSCSAG00000006056	SEPT1	99	95.095	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSCANG00000035786	SEPT1	89	94.823	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSCGRG00001003374	Sept1	100	96.458	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSCGRG00000004919	Sept1	100	95.640	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSDNOG00000014680	SEPT1	85	93.460	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030492	Sept1	100	96.552	ENSDORG00000011443	Sept1	100	95.640	Dipodomys_ordii
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSEASG00005013153	SEPT1	100	94.100	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSECAG00000009390	SEPT1	96	94.550	Equus_caballus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSEEUG00000007661	SEPT1	100	92.371	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSFCAG00000013541	SEPT1	94	94.278	Felis_catus
MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	ENSGGOG00000017024	SEPT1	88	73.262	Gorilla_gorilla
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSSTOG00000002782	SEPT1	100	95.368	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSJJAG00000023131	Sept1	100	93.733	Jaculus_jaculus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSLAFG00000027789	SEPT1	99	92.896	Loxodonta_africana
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSMFAG00000031504	SEPT1	89	95.095	Macaca_fascicularis
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSMMUG00000021842	SEPT1	97	94.985	Macaca_mulatta
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSMNEG00000041695	SEPT1	89	83.424	Macaca_nemestrina
MGP_CAROLIEiJ_G0030492	Sept1	100	96.353	ENSMLEG00000039481	SEPT1	87	96.353	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.931	ENSMAUG00000009531	Sept1	100	97.003	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.931	ENSMICG00000011817	SEPT1	94	95.082	Microcebus_murinus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.931	ENSMOCG00000017518	Sept1	100	96.730	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030492	Sept1	100	99.310	ENSMUSG00000000486	Sept1	100	99.310	Mus_musculus
MGP_CAROLIEiJ_G0030492	Sept1	100	98.634	MGP_PahariEiJ_G0013702	Sept1	100	98.634	Mus_pahari
MGP_CAROLIEiJ_G0030492	Sept1	100	98.780	MGP_SPRETEiJ_G0031606	Sept1	100	98.780	Mus_spretus
MGP_CAROLIEiJ_G0030492	Sept1	100	96.552	ENSMLUG00000006749	SEPT1	99	93.716	Myotis_lucifugus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSNGAG00000021368	Sept1	100	95.640	Nannospalax_galili
MGP_CAROLIEiJ_G0030492	Sept1	100	91.034	ENSMEUG00000000492	SEPT1	100	87.705	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030492	Sept1	100	93.103	ENSOPRG00000007981	SEPT1	100	91.008	Ochotona_princeps
MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	ENSODEG00000014531	SEPT1	100	91.848	Octodon_degus
MGP_CAROLIEiJ_G0030492	Sept1	100	90.345	ENSOANG00000005331	SEPT1	100	85.831	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSOGAG00000013350	SEPT1	99	95.628	Otolemur_garnettii
MGP_CAROLIEiJ_G0030492	Sept1	100	94.558	ENSOARG00000006135	SEPT1	99	94.293	Ovis_aries
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSPPAG00000032680	SEPT1	87	76.567	Pan_paniscus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSPPRG00000008648	-	100	94.262	Panthera_pardus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSPTIG00000006718	SEPT1	87	93.506	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSPTRG00000007998	SEPT1	89	95.368	Pan_troglodytes
MGP_CAROLIEiJ_G0030492	Sept1	100	96.353	ENSPANG00000032364	SEPT1	97	96.353	Papio_anubis
MGP_CAROLIEiJ_G0030492	Sept1	100	97.931	ENSPEMG00000023616	Sept1	100	97.003	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030492	Sept1	100	91.724	ENSPCIG00000001537	SEPT1	100	88.556	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.172	ENSPPYG00000007270	-	100	93.831	Pongo_abelii
MGP_CAROLIEiJ_G0030492	Sept1	100	94.483	ENSPCAG00000009042	SEPT1	100	91.826	Procavia_capensis
MGP_CAROLIEiJ_G0030492	Sept1	100	97.931	ENSPCOG00000028121	SEPT1	90	95.095	Propithecus_coquereli
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSPVAG00000008655	SEPT1	100	95.640	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030492	Sept1	100	98.621	ENSRNOG00000017804	Sept1	100	97.541	Rattus_norvegicus
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSRBIG00000036580	SEPT1	89	94.550	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSRROG00000038708	SEPT1	99	94.550	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030492	Sept1	100	95.862	ENSSBOG00000021733	SEPT1	89	94.278	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030492	Sept1	100	90.345	ENSSHAG00000006478	SEPT1	99	87.397	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030492	Sept1	100	96.552	ENSSSCG00000007800	SEPT1	100	95.628	Sus_scrofa
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSTTRG00000017272	SEPT1	100	95.095	Tursiops_truncatus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSUAMG00000027438	SEPT1	99	94.823	Ursus_americanus
MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	ENSUMAG00000011345	SEPT1	100	95.095	Ursus_maritimus
MGP_CAROLIEiJ_G0030492	Sept1	98	95.775	ENSVVUG00000026116	SEPT1	90	94.048	Vulpes_vulpes