EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030519 (Gene tree)
Gene ID: 110298244
Gene Symbol: -
Alias: KMT2F
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 25283 bases
Position: chr7:129816233-129841515
Accession: 110298244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0082516	RRM_1	PF00076.22	5.9e-07	1	1
MGP_CAROLIEiJ_P0082515	RRM_1	PF00076.22	8.8e-07	1	1
MGP_CAROLIEiJ_P0082514	RRM_1	PF00076.22	1.1e-05	1	1
MGP_CAROLIEiJ_P0082517	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0082518	-	314	-	MGP_CAROLIEiJ_P0082518	70 (aa)	-	UPI0000DBED8A
MGP_CAROLIEiJ_T0082519	-	389	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0082516	-	730	-	MGP_CAROLIEiJ_P0082516	196 (aa)	-	-
MGP_CAROLIEiJ_T0082517	-	5953	XM_021167370	MGP_CAROLIEiJ_P0082517	1725 (aa)	XP_021023029	UPI000A3156FF
MGP_CAROLIEiJ_T0082514	-	6511	-	MGP_CAROLIEiJ_P0082514	1725 (aa)	XP_021023030	UPI000A3156FF
MGP_CAROLIEiJ_T0082515	-	916	-	MGP_CAROLIEiJ_P0082515	247 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030519	-	94	97.403	ENSAMEG00000007540	-	84	91.935	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030519	-	100	78.061	ENSACAG00000007606	-	75	59.052	Anolis_carolinensis
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSANAG00000021698	-	100	85.879	Aotus_nancymaae
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSTSYG00000014425	-	100	86.929	Carlito_syrichta
MGP_CAROLIEiJ_G0030519	-	95	86.833	ENSCAPG00000006491	-	94	91.434	Cavia_aperea
MGP_CAROLIEiJ_G0030519	-	100	78.680	ENSCPBG00000010830	-	74	60.714	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSCANG00000038478	-	56	87.617	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030519	-	100	72.589	ENSCVAG00000011672	setd1a	51	81.419	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSDNOG00000025514	-	98	91.059	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSDORG00000010637	-	100	97.571	Dipodomys_ordii
MGP_CAROLIEiJ_G0030519	-	100	94.898	ENSETEG00000014170	-	63	81.583	Echinops_telfairi
MGP_CAROLIEiJ_G0030519	-	100	98.469	ENSEASG00005011195	-	100	87.102	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSFDAG00000001621	-	99	97.154	Fukomys_damarensis
MGP_CAROLIEiJ_G0030519	-	100	72.081	ENSFHEG00000023258	setd1a	64	75.170	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0030519	-	100	73.096	ENSHBUG00000008893	setd1a	53	81.419	Haplochromis_burtoni
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSHGLG00000014238	-	100	86.879	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSHGLG00100010551	-	98	95.635	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030519	-	100	71.066	ENSHCOG00000003119	setd1a	67	79.730	Hippocampus_comes
MGP_CAROLIEiJ_G0030519	-	100	70.051	ENSIPUG00000007413	setd1a	50	81.081	Ictalurus_punctatus
MGP_CAROLIEiJ_G0030519	-	100	100.000	ENSJJAG00000015314	-	100	96.761	Jaculus_jaculus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSMNEG00000032572	-	100	87.363	Macaca_nemestrina
MGP_CAROLIEiJ_G0030519	-	100	72.081	ENSMAMG00000021851	setd1a	69	76.014	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030519	-	100	100.000	ENSMAUG00000008959	-	73	94.833	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030519	-	100	72.081	ENSMMOG00000016992	setd1a	63	80.068	Mola_mola
MGP_CAROLIEiJ_G0030519	-	99	85.714	ENSMODG00000001726	-	99	75.248	Monodelphis_domestica
MGP_CAROLIEiJ_G0030519	-	100	99.490	ENSMUSG00000042308	Setd1a	100	99.490	Mus_musculus
MGP_CAROLIEiJ_G0030519	-	100	100.000	MGP_PahariEiJ_G0013726	-	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0030519	-	100	98.980	MGP_SPRETEiJ_G0031633	Setd1a	100	98.980	Mus_spretus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSMPUG00000011867	-	68	97.251	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030519	-	92	98.889	ENSMLUG00000027303	-	79	85.142	Myotis_lucifugus
MGP_CAROLIEiJ_G0030519	-	100	100.000	ENSNGAG00000012923	-	100	97.166	Nannospalax_galili
MGP_CAROLIEiJ_G0030519	-	100	73.096	ENSNBRG00000004760	setd1a	52	78.378	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030519	-	100	86.640	ENSNLEG00000016072	-	100	86.901	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030519	-	99	85.204	ENSMEUG00000003396	-	100	76.640	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030519	-	100	98.469	ENSOPRG00000016034	-	100	85.945	Ochotona_princeps
MGP_CAROLIEiJ_G0030519	-	100	98.469	ENSODEG00000014550	-	100	96.761	Octodon_degus
MGP_CAROLIEiJ_G0030519	-	100	88.832	ENSOANG00000013155	-	54	91.837	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030519	-	100	97.959	ENSOCUG00000022182	-	53	92.879	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030519	-	99	81.026	ENSOGAG00000028006	-	100	62.957	Otolemur_garnettii
MGP_CAROLIEiJ_G0030519	-	100	98.469	ENSOARG00000008207	-	64	80.944	Ovis_aries
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSPPAG00000030470	-	98	95.876	Pan_paniscus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSPTIG00000010871	-	99	96.226	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030519	-	100	79.188	ENSPSIG00000005027	-	73	83.540	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030519	-	99	85.204	ENSPCIG00000016725	-	100	74.830	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030519	-	100	71.717	ENSPFOG00000013669	setd1a	55	82.095	Poecilia_formosa
MGP_CAROLIEiJ_G0030519	-	100	72.081	ENSPLAG00000009294	setd1a	52	82.095	Poecilia_latipinna
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSPPYG00000007296	-	100	100.000	Pongo_abelii
MGP_CAROLIEiJ_G0030519	-	78	97.449	ENSPCAG00000014351	-	85	97.449	Procavia_capensis
MGP_CAROLIEiJ_G0030519	-	100	97.959	ENSPVAG00000011049	-	95	98.122	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030519	-	100	72.589	ENSPNYG00000014139	setd1a	52	81.757	Pundamilia_nyererei
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSRBIG00000033047	-	100	95.563	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSRROG00000040062	-	78	81.053	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030519	-	99	85.714	ENSSHAG00000010784	-	100	75.870	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030519	-	100	71.066	ENSSFOG00015007013	setd1a	51	81.333	Scleropages_formosus
MGP_CAROLIEiJ_G0030519	-	80	85.336	ENSSARG00000005591	-	89	85.620	Sorex_araneus
MGP_CAROLIEiJ_G0030519	-	81	97.512	ENSTBEG00000009714	-	70	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSUMAG00000013935	-	91	96.825	Ursus_maritimus
MGP_CAROLIEiJ_G0030519	-	100	98.980	ENSVVUG00000027687	-	96	88.436	Vulpes_vulpes
MGP_CAROLIEiJ_G0030519	-	100	72.081	ENSXCOG00000017585	setd1a	51	79.530	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0030519	-	100	72.081	ENSXMAG00000008021	setd1a	51	81.757	Xiphophorus_maculatus