EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030525 (Gene tree)
Gene ID: 110298351
Gene Symbol: Zfp646
Alias: -
Full Name: zinc finger protein 646
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 9925 bases
Position: chr7:129911253-129921177
Accession: 110298351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	1	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	2	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	3	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	4	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	5	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	6	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	7	8
MGP_CAROLIEiJ_P0082554	zf-C2H2	PF00096.26	6.1e-72	8	8
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	1	7
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	2	7
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	3	7
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	4	7
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	5	7
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	6	7
MGP_CAROLIEiJ_P0082553	zf-C2H2	PF00096.26	1e-34	7	7
MGP_CAROLIEiJ_P0082554	zf-met	PF12874.7	0.0001	1	3
MGP_CAROLIEiJ_P0082554	zf-met	PF12874.7	0.0001	2	3
MGP_CAROLIEiJ_P0082554	zf-met	PF12874.7	0.0001	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0082554	-	6264	XM_021167534	MGP_CAROLIEiJ_P0082554	1787 (aa)	XP_021023193	UPI000A31A6D7
MGP_CAROLIEiJ_T0082552	-	2259	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0082553	-	2236	-	MGP_CAROLIEiJ_P0082553	512 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0030525	Zfp646	52	38.776	MGP_CAROLIEiJ_G0029140	Zfp579	83	38.776
MGP_CAROLIEiJ_G0030525	Zfp646	79	34.483	MGP_CAROLIEiJ_G0029143	-	84	34.483
MGP_CAROLIEiJ_G0030525	Zfp646	61	30.709	MGP_CAROLIEiJ_G0031420	Zfp319	99	31.088
MGP_CAROLIEiJ_G0030525	Zfp646	78	31.058	MGP_CAROLIEiJ_G0028343	Repin1	91	33.333
MGP_CAROLIEiJ_G0030525	Zfp646	98	31.858	MGP_CAROLIEiJ_G0029427	-	91	30.000
MGP_CAROLIEiJ_G0030525	Zfp646	79	32.877	MGP_CAROLIEiJ_G0029614	Zfp715	65	32.877
MGP_CAROLIEiJ_G0030525	Zfp646	82	33.750	MGP_CAROLIEiJ_G0021132	Zfp948	79	34.091
MGP_CAROLIEiJ_G0030525	Zfp646	57	42.353	MGP_CAROLIEiJ_G0029135	Zfp628	65	37.879
MGP_CAROLIEiJ_G0030525	Zfp646	85	30.435	MGP_CAROLIEiJ_G0018661	Zfp759	92	36.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.192	ENSAMEG00000007292	ZNF646	97	75.192	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030525	Zfp646	98	47.600	ENSACAG00000007108	-	99	47.600	Anolis_carolinensis
MGP_CAROLIEiJ_G0030525	Zfp646	64	57.143	ENSACAG00000022516	-	96	57.143	Anolis_carolinensis
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.577	ENSBTAG00000051572	ZNF646	97	75.577	Bos_taurus
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.615	ENSCAFG00000016793	ZNF646	97	74.615	Canis_familiaris
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.615	ENSCAFG00020018148	ZNF646	97	74.615	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.808	ENSCHIG00000017805	ZNF646	97	74.808	Capra_hircus
MGP_CAROLIEiJ_G0030525	Zfp646	100	76.154	ENSTSYG00000032488	ZNF646	98	76.154	Carlito_syrichta
MGP_CAROLIEiJ_G0030525	Zfp646	100	73.633	ENSCAPG00000006001	ZNF646	99	73.633	Cavia_aperea
MGP_CAROLIEiJ_G0030525	Zfp646	100	72.692	ENSCPOG00000034707	ZNF646	97	72.692	Cavia_porcellus
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.000	ENSCCAG00000032171	ZNF646	97	75.000	Cebus_capucinus
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.634	ENSCLAG00000011313	ZNF646	98	75.634	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030525	Zfp646	99	62.613	ENSCHOG00000003969	-	56	72.421	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030525	Zfp646	95	54.118	ENSCPBG00000009878	ZNF646	98	54.118	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.808	ENSDNOG00000031266	ZNF646	97	74.808	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.563	ENSDORG00000002988	Zfp646	98	74.563	Dipodomys_ordii
MGP_CAROLIEiJ_G0030525	Zfp646	99	82.432	ENSEEUG00000007108	-	62	82.432	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.074	ENSFDAG00000013867	ZNF646	98	74.074	Fukomys_damarensis
MGP_CAROLIEiJ_G0030525	Zfp646	99	55.128	ENSGAGG00000018925	ZNF646	99	55.128	Gopherus_agassizii
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.231	ENSHGLG00000021435	ZNF646	96	74.231	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030525	Zfp646	97	52.857	ENSLAFG00000032716	-	100	54.183	Loxodonta_africana
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.192	ENSMICG00000001613	ZNF646	98	75.192	Microcebus_murinus
MGP_CAROLIEiJ_G0030525	Zfp646	100	60.448	ENSMODG00000001808	ZNF646	100	53.716	Monodelphis_domestica
MGP_CAROLIEiJ_G0030525	Zfp646	100	97.260	ENSMUSG00000049739	Zfp646	100	95.868	Mus_musculus
MGP_CAROLIEiJ_G0030525	Zfp646	100	93.359	MGP_PahariEiJ_G0013732	Zfp646	100	93.359	Mus_pahari
MGP_CAROLIEiJ_G0030525	Zfp646	100	95.757	MGP_SPRETEiJ_G0031639	Zfp646	100	95.971	Mus_spretus
MGP_CAROLIEiJ_G0030525	Zfp646	100	73.846	ENSMPUG00000011652	ZNF646	97	73.846	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030525	Zfp646	100	72.500	ENSMLUG00000004755	ZNF646	97	72.500	Myotis_lucifugus
MGP_CAROLIEiJ_G0030525	Zfp646	100	78.488	ENSNGAG00000002579	Zfp646	98	78.488	Nannospalax_galili
MGP_CAROLIEiJ_G0030525	Zfp646	100	60.674	ENSMEUG00000007504	ZNF646	98	61.798	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030525	Zfp646	100	63.462	ENSOPRG00000016125	ZNF646	94	63.889	Ochotona_princeps
MGP_CAROLIEiJ_G0030525	Zfp646	100	56.401	ENSOANG00000010373	-	97	56.772	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030525	Zfp646	100	73.269	ENSOCUG00000014377	ZNF646	97	73.269	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.385	ENSOARG00000008496	ZNF646	99	75.385	Ovis_aries
MGP_CAROLIEiJ_G0030525	Zfp646	100	74.615	ENSPTIG00000011248	ZNF646	97	74.615	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030525	Zfp646	98	41.275	ENSPSIG00000005522	ZNF646	100	57.778	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030525	Zfp646	100	59.813	ENSPCIG00000016711	ZNF646	98	60.935	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030525	Zfp646	99	47.883	ENSSHAG00000011486	-	99	52.941	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030525	Zfp646	100	71.538	ENSSSCG00000026817	ZNF646	97	71.538	Sus_scrofa
MGP_CAROLIEiJ_G0030525	Zfp646	99	76.301	ENSTTRG00000015538	ZNF646	94	73.611	Tursiops_truncatus
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.577	ENSUAMG00000008738	ZNF646	97	75.577	Ursus_americanus
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.385	ENSUMAG00000014051	ZNF646	98	75.385	Ursus_maritimus
MGP_CAROLIEiJ_G0030525	Zfp646	100	75.000	ENSVVUG00000027718	ZNF646	97	75.000	Vulpes_vulpes
MGP_CAROLIEiJ_G0030525	Zfp646	98	40.000	ENSXETG00000001910	znf646	99	50.909	Xenopus_tropicalis