EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030795 (Gene tree)
Gene ID: 110300257
Gene Symbol: Snapc2
Alias: 0610007H10Rik
Full Name: small nuclear RNA activating complex polypeptide 2
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 3104 bases
Position: chr8:1062841-1065944
Accession: 110300257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0083685	SnAPC_2_like	PF11035.8	2.3e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0083685	-	1511	XM_021170348	MGP_CAROLIEiJ_P0083685	359 (aa)	XP_021026007	UPI000A315113

Gene Model

Click here to download MGP_CAROLIEiJ_G0030795's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030795	Snapc2	96	59.538	ENSG00000104976	SNAPC2	100	60.724	Homo_sapiens
MGP_CAROLIEiJ_G0030795	Snapc2	98	57.025	ENSAMEG00000008622	SNAPC2	99	57.025	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030795	Snapc2	75	33.775	ENSAPEG00000010950	-	61	33.775	Amphiprion_percula
MGP_CAROLIEiJ_G0030795	Snapc2	74	35.484	ENSATEG00000003573	-	65	33.491	Anabas_testudineus
MGP_CAROLIEiJ_G0030795	Snapc2	98	37.696	ENSACAG00000026540	-	98	37.696	Anolis_carolinensis
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.838	ENSANAG00000029939	SNAPC2	100	61.838	Aotus_nancymaae
MGP_CAROLIEiJ_G0030795	Snapc2	70	32.468	ENSACLG00000013092	-	58	34.211	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030795	Snapc2	99	59.944	ENSBTAG00000014926	SNAPC2	99	59.944	Bos_taurus
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.561	ENSCJAG00000006117	SNAPC2	100	62.117	Callithrix_jacchus
MGP_CAROLIEiJ_G0030795	Snapc2	100	59.116	ENSCAFG00000031676	SNAPC2	100	59.116	Canis_familiaris
MGP_CAROLIEiJ_G0030795	Snapc2	100	59.116	ENSCAFG00020022851	SNAPC2	100	59.116	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030795	Snapc2	88	64.762	ENSTSYG00000037088	SNAPC2	99	64.762	Carlito_syrichta
MGP_CAROLIEiJ_G0030795	Snapc2	100	57.761	ENSCPOG00000034229	SNAPC2	100	57.761	Cavia_porcellus
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.561	ENSCCAG00000034172	SNAPC2	100	62.117	Cebus_capucinus
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.671	ENSCATG00000037131	SNAPC2	100	62.222	Cercocebus_atys
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.559	ENSCLAG00000006885	SNAPC2	100	61.559	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.272	ENSCSAG00000008167	SNAPC2	100	61.838	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030795	Snapc2	87	44.000	ENSCPBG00000002277	SNAPC2	73	44.582	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030795	Snapc2	96	60.983	ENSCANG00000040525	SNAPC2	100	61.560	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030795	Snapc2	100	80.223	ENSCGRG00001006223	Snapc2	100	80.223	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030795	Snapc2	83	77.181	ENSCGRG00000005622	Snapc2	98	77.181	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030795	Snapc2	78	33.784	ENSCSEG00000014882	-	61	33.784	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0030795	Snapc2	72	30.208	ENSCVAG00000011360	-	89	31.597	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0030795	Snapc2	99	58.726	ENSDNOG00000036458	SNAPC2	98	58.726	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030795	Snapc2	94	60.294	ENSDORG00000009155	Snapc2	98	67.347	Dipodomys_ordii
MGP_CAROLIEiJ_G0030795	Snapc2	99	58.449	ENSETEG00000012986	SNAPC2	99	58.449	Echinops_telfairi
MGP_CAROLIEiJ_G0030795	Snapc2	100	65.746	ENSEASG00005003809	SNAPC2	100	65.746	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030795	Snapc2	100	65.193	ENSECAG00000011011	SNAPC2	100	65.193	Equus_caballus
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.326	ENSFCAG00000014945	SNAPC2	100	61.326	Felis_catus
MGP_CAROLIEiJ_G0030795	Snapc2	83	60.067	ENSFDAG00000001564	SNAPC2	100	65.278	Fukomys_damarensis
MGP_CAROLIEiJ_G0030795	Snapc2	98	38.810	ENSGAGG00000015845	SNAPC2	99	39.243	Gopherus_agassizii
MGP_CAROLIEiJ_G0030795	Snapc2	96	59.249	ENSGGOG00000022392	SNAPC2	100	60.556	Gorilla_gorilla
MGP_CAROLIEiJ_G0030795	Snapc2	98	62.921	ENSHGLG00000011707	SNAPC2	99	62.326	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030795	Snapc2	98	58.445	ENSHGLG00100003422	SNAPC2	98	58.713	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.878	ENSSTOG00000009102	SNAPC2	100	61.878	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030795	Snapc2	100	63.514	ENSJJAG00000003060	Snapc2	100	71.200	Jaculus_jaculus
MGP_CAROLIEiJ_G0030795	Snapc2	73	35.366	ENSKMAG00000007231	-	61	35.366	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0030795	Snapc2	98	35.714	ENSLOCG00000014065	snapc2	98	36.813	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030795	Snapc2	100	57.650	ENSLAFG00000023323	SNAPC2	100	57.650	Loxodonta_africana
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.561	ENSMFAG00000034273	SNAPC2	100	62.117	Macaca_fascicularis
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.561	ENSMMUG00000006540	SNAPC2	100	62.117	Macaca_mulatta
MGP_CAROLIEiJ_G0030795	Snapc2	96	60.694	ENSMNEG00000039547	SNAPC2	100	61.281	Macaca_nemestrina
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.671	ENSMLEG00000031059	SNAPC2	100	62.222	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030795	Snapc2	74	37.209	ENSMAMG00000018195	-	56	37.209	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030795	Snapc2	70	32.468	ENSMZEG00005009488	-	58	34.211	Maylandia_zebra
MGP_CAROLIEiJ_G0030795	Snapc2	80	78.400	ENSMAUG00000015015	Snapc2	100	78.400	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030795	Snapc2	100	65.746	ENSMICG00000035695	SNAPC2	100	65.746	Microcebus_murinus
MGP_CAROLIEiJ_G0030795	Snapc2	100	78.830	ENSMOCG00000019080	Snapc2	100	78.830	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030795	Snapc2	93	45.869	ENSMODG00000005069	-	99	47.493	Monodelphis_domestica
MGP_CAROLIEiJ_G0030795	Snapc2	98	30.914	ENSMALG00000002335	-	99	30.914	Monopterus_albus
MGP_CAROLIEiJ_G0030795	Snapc2	100	97.493	ENSMUSG00000011837	Snapc2	100	97.493	Mus_musculus
MGP_CAROLIEiJ_G0030795	Snapc2	100	97.214	MGP_SPRETEiJ_G0031903	Snapc2	100	97.214	Mus_spretus
MGP_CAROLIEiJ_G0030795	Snapc2	100	58.082	ENSMPUG00000008010	SNAPC2	100	58.356	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030795	Snapc2	78	51.957	ENSMLUG00000002738	-	90	51.014	Myotis_lucifugus
MGP_CAROLIEiJ_G0030795	Snapc2	84	52.667	ENSMLUG00000001710	-	96	50.143	Myotis_lucifugus
MGP_CAROLIEiJ_G0030795	Snapc2	96	57.307	ENSMLUG00000013689	-	100	58.011	Myotis_lucifugus
MGP_CAROLIEiJ_G0030795	Snapc2	84	48.000	ENSMLUG00000013735	-	89	45.833	Myotis_lucifugus
MGP_CAROLIEiJ_G0030795	Snapc2	77	50.172	ENSMLUG00000006427	-	89	50.000	Myotis_lucifugus
MGP_CAROLIEiJ_G0030795	Snapc2	85	61.967	ENSNGAG00000014201	Snapc2	95	61.967	Nannospalax_galili
MGP_CAROLIEiJ_G0030795	Snapc2	96	59.538	ENSNLEG00000001250	SNAPC2	100	61.560	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030795	Snapc2	99	48.333	ENSMEUG00000014367	SNAPC2	99	48.333	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030795	Snapc2	99	60.274	ENSODEG00000011415	SNAPC2	99	60.274	Octodon_degus
MGP_CAROLIEiJ_G0030795	Snapc2	76	32.014	ENSONIG00000002078	-	93	32.740	Oreochromis_niloticus
MGP_CAROLIEiJ_G0030795	Snapc2	100	56.403	ENSOCUG00000027536	SNAPC2	77	56.403	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030795	Snapc2	98	30.521	ENSOMEG00000003040	snapc2	95	31.095	Oryzias_melastigma
MGP_CAROLIEiJ_G0030795	Snapc2	99	58.380	ENSOGAG00000012870	SNAPC2	99	58.380	Otolemur_garnettii
MGP_CAROLIEiJ_G0030795	Snapc2	84	56.678	ENSOARG00000003045	SNAPC2	100	56.678	Ovis_aries
MGP_CAROLIEiJ_G0030795	Snapc2	96	56.286	ENSPPAG00000032460	SNAPC2	100	57.851	Pan_paniscus
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.281	ENSPPRG00000003265	SNAPC2	100	61.281	Panthera_pardus
MGP_CAROLIEiJ_G0030795	Snapc2	86	51.466	ENSPTIG00000016014	SNAPC2	89	51.466	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030795	Snapc2	96	59.249	ENSPTRG00000042034	SNAPC2	100	61.003	Pan_troglodytes
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.561	ENSPANG00000025882	SNAPC2	100	62.117	Papio_anubis
MGP_CAROLIEiJ_G0030795	Snapc2	80	34.884	ENSPKIG00000000084	snapc2	62	34.551	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030795	Snapc2	95	39.106	ENSPSIG00000016099	SNAPC2	99	39.892	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030795	Snapc2	100	79.944	ENSPEMG00000009767	Snapc2	100	79.944	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030795	Snapc2	98	32.312	ENSPFOG00000012045	-	97	32.312	Poecilia_formosa
MGP_CAROLIEiJ_G0030795	Snapc2	98	30.189	ENSPLAG00000018873	-	89	31.471	Poecilia_latipinna
MGP_CAROLIEiJ_G0030795	Snapc2	87	30.625	ENSPMEG00000002270	-	89	31.471	Poecilia_mexicana
MGP_CAROLIEiJ_G0030795	Snapc2	65	33.987	ENSPREG00000003140	-	57	33.987	Poecilia_reticulata
MGP_CAROLIEiJ_G0030795	Snapc2	96	60.405	ENSPPYG00000009494	SNAPC2	100	61.003	Pongo_abelii
MGP_CAROLIEiJ_G0030795	Snapc2	55	78.689	ENSPCAG00000015864	-	59	78.689	Procavia_capensis
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.602	ENSPCOG00000026672	SNAPC2	100	63.260	Propithecus_coquereli
MGP_CAROLIEiJ_G0030795	Snapc2	70	62.151	ENSPVAG00000002296	SNAPC2	68	62.151	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030795	Snapc2	100	85.237	ENSRNOG00000001056	Snapc2	100	85.237	Rattus_norvegicus
MGP_CAROLIEiJ_G0030795	Snapc2	96	60.983	ENSRBIG00000044314	SNAPC2	100	61.560	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030795	Snapc2	96	60.983	ENSRROG00000043480	SNAPC2	100	61.560	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030795	Snapc2	96	61.561	ENSSBOG00000011587	SNAPC2	100	62.117	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030795	Snapc2	94	42.571	ENSSHAG00000009002	-	99	43.733	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030795	Snapc2	75	35.484	ENSSMAG00000009095	-	56	35.484	Scophthalmus_maximus
MGP_CAROLIEiJ_G0030795	Snapc2	74	33.121	ENSSDUG00000016949	-	55	31.210	Seriola_dumerili
MGP_CAROLIEiJ_G0030795	Snapc2	100	44.568	ENSSARG00000012954	SNAPC2	99	45.404	Sorex_araneus
MGP_CAROLIEiJ_G0030795	Snapc2	89	39.818	ENSSPUG00000014836	-	60	39.818	Sphenodon_punctatus
MGP_CAROLIEiJ_G0030795	Snapc2	100	60.221	ENSSSCG00000013589	SNAPC2	100	60.221	Sus_scrofa
MGP_CAROLIEiJ_G0030795	Snapc2	61	33.628	ENSTRUG00000005122	-	99	30.818	Takifugu_rubripes
MGP_CAROLIEiJ_G0030795	Snapc2	100	61.050	ENSTTRG00000010165	SNAPC2	100	61.050	Tursiops_truncatus
MGP_CAROLIEiJ_G0030795	Snapc2	100	59.444	ENSUAMG00000021489	SNAPC2	100	59.444	Ursus_americanus
MGP_CAROLIEiJ_G0030795	Snapc2	86	52.885	ENSUMAG00000014809	SNAPC2	86	52.885	Ursus_maritimus
MGP_CAROLIEiJ_G0030795	Snapc2	100	59.116	ENSVVUG00000026998	SNAPC2	100	59.116	Vulpes_vulpes
MGP_CAROLIEiJ_G0030795	Snapc2	92	30.719	ENSXMAG00000027683	-	70	30.719	Xiphophorus_maculatus