EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030961 (Gene tree)
Gene ID: 110299750
Gene Symbol: Wrn
Alias: -
Full Name: Werner syndrome RecQ like helicase
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 144019 bases
Position: chr8:27277085-27421103
Accession: 109635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0084137	HRDC	PF00570.23	8.7e-14	1	1
MGP_CAROLIEiJ_P0084138	HRDC	PF00570.23	8.7e-14	1	1
MGP_CAROLIEiJ_P0084137	DEAD	PF00270.29	9.7e-16	1	1
MGP_CAROLIEiJ_P0084138	DEAD	PF00270.29	9.7e-16	1	1
MGP_CAROLIEiJ_P0084137	DNA_pol_A_exo1	PF01612.20	4e-34	1	1
MGP_CAROLIEiJ_P0084138	DNA_pol_A_exo1	PF01612.20	4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0084137	-	6335	-	MGP_CAROLIEiJ_P0084137	1401 (aa)	-	-
MGP_CAROLIEiJ_T0084138	-	6225	-	MGP_CAROLIEiJ_P0084138	1401 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030961's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030961's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030961	Wrn	100	69.526	ENSG00000165392	WRN	99	69.805	Homo_sapiens
MGP_CAROLIEiJ_G0030961	Wrn	81	70.202	ENSAMEG00000000475	-	97	70.303	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030961	Wrn	93	55.991	ENSAPLG00000001616	WRN	91	56.273	Anas_platyrhynchos
MGP_CAROLIEiJ_G0030961	Wrn	94	51.524	ENSACAG00000003109	WRN	100	51.670	Anolis_carolinensis
MGP_CAROLIEiJ_G0030961	Wrn	100	67.785	ENSANAG00000032806	WRN	98	71.073	Aotus_nancymaae
MGP_CAROLIEiJ_G0030961	Wrn	94	48.726	ENSAMXG00000010066	wrn	89	48.801	Astyanax_mexicanus
MGP_CAROLIEiJ_G0030961	Wrn	99	68.237	ENSBTAG00000021592	WRN	99	68.237	Bos_taurus
MGP_CAROLIEiJ_G0030961	Wrn	57	33.375	WBGene00006944	wrn-1	73	33.375	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0030961	Wrn	100	70.063	ENSCJAG00000012511	WRN	99	70.133	Callithrix_jacchus
MGP_CAROLIEiJ_G0030961	Wrn	100	70.427	ENSCAFG00000006410	WRN	97	70.427	Canis_familiaris
MGP_CAROLIEiJ_G0030961	Wrn	100	68.298	ENSCAFG00020001236	WRN	99	68.298	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030961	Wrn	99	68.357	ENSCHIG00000014991	WRN	99	68.286	Capra_hircus
MGP_CAROLIEiJ_G0030961	Wrn	99	71.049	ENSTSYG00000012689	WRN	99	70.982	Carlito_syrichta
MGP_CAROLIEiJ_G0030961	Wrn	90	64.723	ENSCAPG00000016803	WRN	98	65.598	Cavia_aperea
MGP_CAROLIEiJ_G0030961	Wrn	99	68.663	ENSCPOG00000002943	WRN	98	68.859	Cavia_porcellus
MGP_CAROLIEiJ_G0030961	Wrn	100	70.810	ENSCCAG00000023793	WRN	99	70.810	Cebus_capucinus
MGP_CAROLIEiJ_G0030961	Wrn	99	71.296	ENSCATG00000040557	WRN	99	72.459	Cercocebus_atys
MGP_CAROLIEiJ_G0030961	Wrn	96	72.721	ENSCLAG00000000817	WRN	99	69.541	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030961	Wrn	96	70.876	ENSCSAG00000015810	WRN	99	70.592	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030961	Wrn	70	85.955	ENSCHOG00000008966	WRN	74	85.955	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030961	Wrn	95	57.840	ENSCPBG00000013421	WRN	90	58.172	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030961	Wrn	60	40.578	ENSCING00000002232	-	70	40.578	Ciona_intestinalis
MGP_CAROLIEiJ_G0030961	Wrn	100	70.112	ENSCANG00000037137	WRN	99	70.112	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030961	Wrn	100	83.393	ENSCGRG00001016491	Wrn	100	83.607	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030961	Wrn	83	82.571	ENSCGRG00000016821	Wrn	100	82.830	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030961	Wrn	99	44.844	ENSDARG00000098211	wrn	99	44.844	Danio_rerio
MGP_CAROLIEiJ_G0030961	Wrn	95	66.643	ENSDNOG00000008481	WRN	100	66.643	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030961	Wrn	100	69.247	ENSDORG00000002696	Wrn	100	69.880	Dipodomys_ordii
MGP_CAROLIEiJ_G0030961	Wrn	79	80.583	ENSETEG00000019854	WRN	79	80.583	Echinops_telfairi
MGP_CAROLIEiJ_G0030961	Wrn	97	67.548	ENSEASG00005016813	WRN	96	80.952	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030961	Wrn	100	67.906	ENSECAG00000000110	WRN	99	68.047	Equus_caballus
MGP_CAROLIEiJ_G0030961	Wrn	82	64.977	ENSEEUG00000004926	WRN	90	64.977	Erinaceus_europaeus
MGP_CAROLIEiJ_G0030961	Wrn	94	47.286	ENSELUG00000017817	wrn	96	50.386	Esox_lucius
MGP_CAROLIEiJ_G0030961	Wrn	100	66.224	ENSFCAG00000024759	WRN	99	66.224	Felis_catus
MGP_CAROLIEiJ_G0030961	Wrn	100	70.865	ENSFDAG00000008637	WRN	99	70.865	Fukomys_damarensis
MGP_CAROLIEiJ_G0030961	Wrn	95	55.841	ENSGALG00000040909	WRN	89	56.135	Gallus_gallus
MGP_CAROLIEiJ_G0030961	Wrn	99	54.925	ENSGAGG00000022647	WRN	95	56.786	Gopherus_agassizii
MGP_CAROLIEiJ_G0030961	Wrn	100	71.266	ENSGGOG00000022154	WRN	99	71.337	Gorilla_gorilla
MGP_CAROLIEiJ_G0030961	Wrn	100	72.119	ENSHGLG00000003638	WRN	100	72.048	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030961	Wrn	95	47.191	ENSIPUG00000002090	wrn	99	45.436	Ictalurus_punctatus
MGP_CAROLIEiJ_G0030961	Wrn	100	71.251	ENSSTOG00000013599	WRN	99	71.251	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030961	Wrn	100	71.225	ENSJJAG00000015655	Wrn	100	71.225	Jaculus_jaculus
MGP_CAROLIEiJ_G0030961	Wrn	98	48.408	ENSLACG00000001569	-	92	48.903	Latimeria_chalumnae
MGP_CAROLIEiJ_G0030961	Wrn	94	51.373	ENSLOCG00000010792	wrn	93	50.110	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030961	Wrn	100	71.116	ENSLAFG00000004434	WRN	100	71.116	Loxodonta_africana
MGP_CAROLIEiJ_G0030961	Wrn	99	70.929	ENSMFAG00000043428	WRN	99	71.286	Macaca_fascicularis
MGP_CAROLIEiJ_G0030961	Wrn	100	69.483	ENSMMUG00000022655	WRN	99	69.832	Macaca_mulatta
MGP_CAROLIEiJ_G0030961	Wrn	100	69.993	ENSMNEG00000032617	WRN	99	70.063	Macaca_nemestrina
MGP_CAROLIEiJ_G0030961	Wrn	99	71.652	ENSMLEG00000038296	WRN	99	71.724	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030961	Wrn	94	56.287	ENSMGAG00000004960	WRN	88	56.679	Meleagris_gallopavo
MGP_CAROLIEiJ_G0030961	Wrn	100	84.034	ENSMAUG00000016235	Wrn	100	84.248	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030961	Wrn	100	67.416	ENSMICG00000010630	WRN	99	67.486	Microcebus_murinus
MGP_CAROLIEiJ_G0030961	Wrn	100	81.883	ENSMOCG00000013972	Wrn	100	81.883	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030961	Wrn	99	56.054	ENSMODG00000018997	WRN	99	56.481	Monodelphis_domestica
MGP_CAROLIEiJ_G0030961	Wrn	100	97.502	ENSMUSG00000031583	Wrn	100	97.502	Mus_musculus
MGP_CAROLIEiJ_G0030961	Wrn	100	93.219	MGP_PahariEiJ_G0021430	Wrn	100	93.219	Mus_pahari
MGP_CAROLIEiJ_G0030961	Wrn	100	97.716	MGP_SPRETEiJ_G0032079	Wrn	100	97.716	Mus_spretus
MGP_CAROLIEiJ_G0030961	Wrn	100	68.630	ENSMPUG00000010201	WRN	99	68.701	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030961	Wrn	99	70.756	ENSMLUG00000005863	WRN	99	70.827	Myotis_lucifugus
MGP_CAROLIEiJ_G0030961	Wrn	99	76.940	ENSNGAG00000018413	Wrn	99	76.940	Nannospalax_galili
MGP_CAROLIEiJ_G0030961	Wrn	100	70.792	ENSNLEG00000012006	WRN	99	71.075	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030961	Wrn	74	60.870	ENSMEUG00000008271	-	75	60.870	Notamacropus_eugenii
MGP_CAROLIEiJ_G0030961	Wrn	88	59.905	ENSOPRG00000001480	WRN	88	59.905	Ochotona_princeps
MGP_CAROLIEiJ_G0030961	Wrn	100	71.124	ENSODEG00000004076	WRN	100	71.195	Octodon_degus
MGP_CAROLIEiJ_G0030961	Wrn	90	60.157	ENSOANG00000005952	-	94	60.157	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0030961	Wrn	100	71.378	ENSOCUG00000012620	WRN	90	71.378	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030961	Wrn	97	68.860	ENSOGAG00000009600	WRN	99	68.933	Otolemur_garnettii
MGP_CAROLIEiJ_G0030961	Wrn	99	68.665	ENSOARG00000000163	WRN	99	68.594	Ovis_aries
MGP_CAROLIEiJ_G0030961	Wrn	100	71.002	ENSPPAG00000036871	WRN	99	71.002	Pan_paniscus
MGP_CAROLIEiJ_G0030961	Wrn	100	68.799	ENSPPRG00000010928	WRN	99	68.728	Panthera_pardus
MGP_CAROLIEiJ_G0030961	Wrn	100	68.586	ENSPTIG00000020609	WRN	99	68.586	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030961	Wrn	100	70.771	ENSPTRG00000020145	WRN	99	70.771	Pan_troglodytes
MGP_CAROLIEiJ_G0030961	Wrn	99	69.972	ENSPANG00000018594	WRN	99	70.251	Papio_anubis
MGP_CAROLIEiJ_G0030961	Wrn	76	59.735	ENSPKIG00000025497	wrn	97	59.735	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030961	Wrn	95	57.837	ENSPSIG00000013411	WRN	90	58.486	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030961	Wrn	99	81.526	ENSPEMG00000020615	Wrn	99	82.973	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030961	Wrn	94	57.111	ENSPCIG00000020146	WRN	96	57.943	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030961	Wrn	100	69.944	ENSPPYG00000018494	WRN	99	70.293	Pongo_abelii
MGP_CAROLIEiJ_G0030961	Wrn	90	69.914	ENSPCAG00000013763	WRN	88	69.914	Procavia_capensis
MGP_CAROLIEiJ_G0030961	Wrn	78	59.380	ENSPCOG00000012938	WRN	96	59.350	Propithecus_coquereli
MGP_CAROLIEiJ_G0030961	Wrn	93	67.805	ENSPVAG00000012909	WRN	91	68.085	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030961	Wrn	94	48.600	ENSPNAG00000021848	wrn	88	48.677	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0030961	Wrn	100	86.510	ENSRNOG00000015440	Wrn	100	86.510	Rattus_norvegicus
MGP_CAROLIEiJ_G0030961	Wrn	100	70.370	ENSRBIG00000031825	WRN	100	70.327	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030961	Wrn	100	69.972	ENSRROG00000045381	WRN	99	69.902	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030961	Wrn	100	70.161	ENSSBOG00000027238	WRN	99	70.161	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030961	Wrn	99	56.414	ENSSHAG00000005577	WRN	99	57.041	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030961	Wrn	95	49.703	ENSSFOG00015006123	wrn	95	49.777	Scleropages_formosus
MGP_CAROLIEiJ_G0030961	Wrn	73	66.234	ENSSARG00000006157	WRN	87	66.234	Sorex_araneus
MGP_CAROLIEiJ_G0030961	Wrn	97	72.226	ENSSSCG00000015840	WRN	99	72.226	Sus_scrofa
MGP_CAROLIEiJ_G0030961	Wrn	72	57.021	ENSTGUG00000001765	WRN	100	57.333	Taeniopygia_guttata
MGP_CAROLIEiJ_G0030961	Wrn	78	56.171	ENSTBEG00000012702	-	78	55.774	Tupaia_belangeri
MGP_CAROLIEiJ_G0030961	Wrn	98	65.365	ENSTTRG00000012302	WRN	99	65.245	Tursiops_truncatus
MGP_CAROLIEiJ_G0030961	Wrn	100	67.069	ENSUAMG00000021324	WRN	99	67.235	Ursus_americanus
MGP_CAROLIEiJ_G0030961	Wrn	85	67.333	ENSUMAG00000007159	WRN	97	67.333	Ursus_maritimus
MGP_CAROLIEiJ_G0030961	Wrn	100	65.269	ENSVPAG00000011004	WRN	99	65.269	Vicugna_pacos
MGP_CAROLIEiJ_G0030961	Wrn	100	66.598	ENSVVUG00000019867	WRN	99	66.598	Vulpes_vulpes
MGP_CAROLIEiJ_G0030961	Wrn	98	53.123	ENSXETG00000018302	wrn	99	54.868	Xenopus_tropicalis