EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0030970 (Gene tree)
Gene ID: 110299764
Gene Symbol: Rbpms
Alias: 2010300K22Rik|2700019M19Rik|hermes
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 151366 bases
Position: chr8:28015971-28167336
Accession: 110299764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0084162	RRM_1	PF00076.22	1.9e-11	1	1
MGP_CAROLIEiJ_P0084160	RRM_1	PF00076.22	2e-11	1	1
MGP_CAROLIEiJ_P0084161	RRM_1	PF00076.22	2e-11	1	1
MGP_CAROLIEiJ_P0084170	RRM_1	PF00076.22	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0084172	-	318	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0084171	-	460	-	MGP_CAROLIEiJ_P0084171	64 (aa)	-	UPI0003F4863A
MGP_CAROLIEiJ_T0084170	-	1052	XM_021169579	MGP_CAROLIEiJ_P0084170	220 (aa)	XP_021025238	UPI000002380D
MGP_CAROLIEiJ_T0084169	-	189	-	MGP_CAROLIEiJ_P0084169	62 (aa)	-	-
MGP_CAROLIEiJ_T0084168	-	525	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0084161	-	2535	-	MGP_CAROLIEiJ_P0084161	197 (aa)	-	UPI000002380C
MGP_CAROLIEiJ_T0084160	-	2444	XM_021169582	MGP_CAROLIEiJ_P0084160	197 (aa)	XP_021025241	UPI000002380C
MGP_CAROLIEiJ_T0084163	-	1394	-	MGP_CAROLIEiJ_P0084163	197 (aa)	-	UPI000002380C
MGP_CAROLIEiJ_T0084162	-	2363	-	MGP_CAROLIEiJ_P0084162	191 (aa)	-	-
MGP_CAROLIEiJ_T0084165	-	549	-	MGP_CAROLIEiJ_P0084165	70 (aa)	-	UPI0003335393
MGP_CAROLIEiJ_T0084164	-	869	-	MGP_CAROLIEiJ_P0084164	93 (aa)	-	UPI0000605C80
MGP_CAROLIEiJ_T0084167	-	639	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0084166	-	405	-	MGP_CAROLIEiJ_P0084166	57 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0030970's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0030970's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0030970	Rbpms	90	71.658	MGP_CAROLIEiJ_G0032367	Rbpms2	90	69.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSG00000157110	RBPMS	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSAPOG00000022304	RBPMS	99	78.974	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0030970	Rbpms	93	97.561	ENSAMEG00000001522	RBPMS	93	97.561	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0030970	Rbpms	66	79.699	ENSACIG00000011395	RBPMS	75	77.857	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSAOCG00000007731	RBPMS	99	78.974	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSAPEG00000023543	RBPMS	99	78.974	Amphiprion_percula
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSATEG00000018184	RBPMS	99	78.974	Anabas_testudineus
MGP_CAROLIEiJ_G0030970	Rbpms	100	92.424	ENSACAG00000003012	RBPMS	100	87.879	Anolis_carolinensis
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSANAG00000028150	RBPMS	100	99.091	Aotus_nancymaae
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.590	ENSACLG00000002926	RBPMS	99	79.487	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0030970	Rbpms	98	81.959	ENSAMXG00000033491	rbpms	98	78.646	Astyanax_mexicanus
MGP_CAROLIEiJ_G0030970	Rbpms	100	97.727	ENSBTAG00000033727	RBPMS	100	97.727	Bos_taurus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSCJAG00000012366	RBPMS	100	98.636	Callithrix_jacchus
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSCAFG00000006503	RBPMS	100	99.091	Canis_familiaris
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSCAFG00020001031	RBPMS	100	99.091	Canis_lupus_dingo
MGP_CAROLIEiJ_G0030970	Rbpms	100	91.414	ENSCHIG00000027156	RBPMS	100	87.374	Capra_hircus
MGP_CAROLIEiJ_G0030970	Rbpms	58	100.000	ENSTSYG00000013982	RBPMS	83	100.000	Carlito_syrichta
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.182	ENSCPOG00000038597	RBPMS	100	98.182	Cavia_porcellus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.477	ENSCCAG00000033226	RBPMS	100	98.477	Cebus_capucinus
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSCATG00000036486	RBPMS	100	99.091	Cercocebus_atys
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSCLAG00000001518	RBPMS	100	99.495	Chinchilla_lanigera
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSCSAG00000015838	RBPMS	100	99.091	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0030970	Rbpms	90	98.990	ENSCHOG00000008745	RBPMS	100	98.990	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0030970	Rbpms	97	92.670	ENSCPBG00000013437	RBPMS	97	87.958	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSCANG00000034997	RBPMS	100	99.495	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0030970	Rbpms	100	100.000	ENSCGRG00001002814	Rbpms	100	100.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0030970	Rbpms	90	100.000	ENSCGRG00000006095	Rbpms	100	100.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0030970	Rbpms	97	83.854	ENSCSEG00000002777	rbpms	99	80.328	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSCVAG00000013975	RBPMS	99	78.974	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0030970	Rbpms	87	66.667	ENSDARG00000099396	rbpms	100	64.327	Danio_rerio
MGP_CAROLIEiJ_G0030970	Rbpms	100	95.909	ENSDNOG00000008126	RBPMS	100	91.818	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSETEG00000017582	RBPMS	100	98.636	Echinops_telfairi
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSEASG00005016962	RBPMS	99	99.495	Equus_asinus_asinus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSECAG00000020735	RBPMS	100	98.636	Equus_caballus
MGP_CAROLIEiJ_G0030970	Rbpms	99	80.000	ENSELUG00000009787	rbpms	99	76.923	Esox_lucius
MGP_CAROLIEiJ_G0030970	Rbpms	100	49.746	ENSFCAG00000022292	-	85	58.333	Felis_catus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSFCAG00000025639	-	100	98.636	Felis_catus
MGP_CAROLIEiJ_G0030970	Rbpms	90	98.990	ENSFDAG00000012078	RBPMS	100	98.990	Fukomys_damarensis
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSFHEG00000000618	rbpms	99	78.974	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0030970	Rbpms	76	55.705	ENSGMOG00000009646	-	97	56.849	Gadus_morhua
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSGAFG00000016566	RBPMS	99	78.974	Gambusia_affinis
MGP_CAROLIEiJ_G0030970	Rbpms	99	73.846	ENSGACG00000019471	rbpms	99	73.333	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0030970	Rbpms	63	91.667	ENSGAGG00000023634	RBPMS	56	85.821	Gopherus_agassizii
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.590	ENSHBUG00000005888	RBPMS	99	79.487	Haplochromis_burtoni
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSHGLG00000002303	RBPMS	100	99.091	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSHGLG00100008787	RBPMS	100	99.495	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0030970	Rbpms	97	84.896	ENSHCOG00000005774	rbpms	99	80.729	Hippocampus_comes
MGP_CAROLIEiJ_G0030970	Rbpms	97	79.167	ENSIPUG00000012459	RBPMS	99	76.562	Ictalurus_punctatus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSSTOG00000026546	RBPMS	100	98.636	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSJJAG00000014024	Rbpms	100	98.636	Jaculus_jaculus
MGP_CAROLIEiJ_G0030970	Rbpms	89	67.797	ENSKMAG00000006377	RBPMS	88	70.621	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSLBEG00000027989	RBPMS	97	82.286	Labrus_bergylta
MGP_CAROLIEiJ_G0030970	Rbpms	91	86.667	ENSLOCG00000013199	RBPMS	98	82.222	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSLAFG00000000209	RBPMS	100	98.636	Loxodonta_africana
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSMFAG00000036911	RBPMS	100	99.091	Macaca_fascicularis
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSMMUG00000000458	RBPMS	100	99.091	Macaca_mulatta
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSMNEG00000043805	RBPMS	100	99.091	Macaca_nemestrina
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSMLEG00000015635	RBPMS	100	99.495	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0030970	Rbpms	68	85.271	ENSMAMG00000004604	RBPMS	68	85.271	Mastacembelus_armatus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.590	ENSMZEG00005000698	RBPMS	97	81.818	Maylandia_zebra
MGP_CAROLIEiJ_G0030970	Rbpms	89	95.455	ENSMGAG00000005088	RBPMS	99	83.673	Meleagris_gallopavo
MGP_CAROLIEiJ_G0030970	Rbpms	100	100.000	ENSMAUG00000018892	Rbpms	100	100.000	Mesocricetus_auratus
MGP_CAROLIEiJ_G0030970	Rbpms	100	96.954	ENSMICG00000001295	RBPMS	100	96.954	Microcebus_murinus
MGP_CAROLIEiJ_G0030970	Rbpms	100	100.000	ENSMOCG00000014009	Rbpms	100	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0030970	Rbpms	88	82.081	ENSMMOG00000012036	RBPMS	72	77.457	Mola_mola
MGP_CAROLIEiJ_G0030970	Rbpms	96	93.158	ENSMODG00000019006	RBPMS	91	87.629	Monodelphis_domestica
MGP_CAROLIEiJ_G0030970	Rbpms	99	82.051	ENSMALG00000003261	RBPMS	99	77.949	Monopterus_albus
MGP_CAROLIEiJ_G0030970	Rbpms	100	100.000	ENSMUSG00000031586	Rbpms	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.545	MGP_PahariEiJ_G0021439	Rbpms	100	99.545	Mus_pahari
MGP_CAROLIEiJ_G0030970	Rbpms	100	100.000	MGP_SPRETEiJ_G0032087	Rbpms	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0030970	Rbpms	93	97.561	ENSMPUG00000011314	RBPMS	93	97.561	Mustela_putorius_furo
MGP_CAROLIEiJ_G0030970	Rbpms	100	97.462	ENSMLUG00000009391	RBPMS	100	98.101	Myotis_lucifugus
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSNGAG00000011141	Rbpms	100	99.091	Nannospalax_galili
MGP_CAROLIEiJ_G0030970	Rbpms	89	86.364	ENSNBRG00000003313	RBPMS	97	81.818	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSNLEG00000036183	-	100	98.636	Nomascus_leucogenys
MGP_CAROLIEiJ_G0030970	Rbpms	100	78.636	ENSOPRG00000013151	RBPMS	100	78.636	Ochotona_princeps
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSODEG00000006700	RBPMS	100	99.091	Octodon_degus
MGP_CAROLIEiJ_G0030970	Rbpms	89	86.364	ENSONIG00000007546	RBPMS	100	81.818	Oreochromis_niloticus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSOCUG00000008572	RBPMS	100	98.636	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0030970	Rbpms	100	82.234	ENSORLG00000004135	-	99	77.949	Oryzias_latipes
MGP_CAROLIEiJ_G0030970	Rbpms	99	82.564	ENSORLG00020016179	RBPMS	99	78.462	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0030970	Rbpms	99	82.564	ENSORLG00015013770	RBPMS	99	78.462	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0030970	Rbpms	99	82.564	ENSOMEG00000005044	RBPMS	99	78.462	Oryzias_melastigma
MGP_CAROLIEiJ_G0030970	Rbpms	92	96.703	ENSOGAG00000030298	RBPMS	81	96.703	Otolemur_garnettii
MGP_CAROLIEiJ_G0030970	Rbpms	67	91.406	ENSOARG00000010366	RBPMS	94	88.722	Ovis_aries
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSPPAG00000033108	RBPMS	100	99.495	Pan_paniscus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSPPRG00000004836	RBPMS	100	98.636	Panthera_pardus
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSPTIG00000015964	RBPMS	90	99.495	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSPTRG00000020135	RBPMS	100	99.091	Pan_troglodytes
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSPANG00000008143	RBPMS	100	99.091	Papio_anubis
MGP_CAROLIEiJ_G0030970	Rbpms	96	83.158	ENSPKIG00000000535	-	97	79.474	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030970	Rbpms	96	80.000	ENSPKIG00000004836	rbpms	99	76.842	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0030970	Rbpms	89	94.286	ENSPSIG00000006136	RBPMS	99	89.143	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0030970	Rbpms	81	86.875	ENSPMGG00000018012	RBPMS	91	70.936	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.485	ENSPEMG00000021130	Rbpms	100	98.485	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0030970	Rbpms	90	95.480	ENSPCIG00000019298	-	81	79.500	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSPFOG00000017158	RBPMS	99	78.974	Poecilia_formosa
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSPLAG00000010767	RBPMS	99	78.974	Poecilia_latipinna
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSPMEG00000009788	RBPMS	99	78.974	Poecilia_mexicana
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSPREG00000016959	RBPMS	99	78.974	Poecilia_reticulata
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSPPYG00000018487	RBPMS	100	99.091	Pongo_abelii
MGP_CAROLIEiJ_G0030970	Rbpms	58	98.182	ENSPCAG00000013493	-	100	98.182	Procavia_capensis
MGP_CAROLIEiJ_G0030970	Rbpms	100	86.364	ENSPCOG00000015948	RBPMS	100	86.364	Propithecus_coquereli
MGP_CAROLIEiJ_G0030970	Rbpms	99	97.260	ENSPVAG00000001661	RBPMS	99	97.260	Pteropus_vampyrus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.590	ENSPNYG00000001172	RBPMS	97	81.818	Pundamilia_nyererei
MGP_CAROLIEiJ_G0030970	Rbpms	98	82.474	ENSPNAG00000029160	RBPMS	99	78.351	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0030970	Rbpms	100	100.000	ENSRNOG00000013328	Rbpms	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0030970	Rbpms	98	92.593	ENSRBIG00000038218	RBPMS	100	98.857	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSRROG00000042518	RBPMS	100	99.091	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSSBOG00000026670	RBPMS	100	98.636	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0030970	Rbpms	98	90.206	ENSSHAG00000010114	RBPMS	99	85.567	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0030970	Rbpms	89	82.857	ENSSFOG00015017481	-	99	76.316	Scleropages_formosus
MGP_CAROLIEiJ_G0030970	Rbpms	100	82.234	ENSSFOG00015000417	rbpms	100	78.680	Scleropages_formosus
MGP_CAROLIEiJ_G0030970	Rbpms	100	83.249	ENSSMAG00000010871	rbpms	100	79.188	Scophthalmus_maximus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSSDUG00000010894	RBPMS	99	78.974	Seriola_dumerili
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSSLDG00000012916	RBPMS	99	78.974	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0030970	Rbpms	100	95.000	ENSSARG00000000274	RBPMS	100	90.909	Sorex_araneus
MGP_CAROLIEiJ_G0030970	Rbpms	98	90.256	ENSSPUG00000017525	RBPMS	74	85.641	Sphenodon_punctatus
MGP_CAROLIEiJ_G0030970	Rbpms	100	62.944	ENSSPAG00000004777	rbpms	93	78.289	Stegastes_partitus
MGP_CAROLIEiJ_G0030970	Rbpms	100	98.636	ENSSSCG00000015846	RBPMS	100	98.636	Sus_scrofa
MGP_CAROLIEiJ_G0030970	Rbpms	97	92.147	ENSTGUG00000001776	RBPMS	100	87.435	Taeniopygia_guttata
MGP_CAROLIEiJ_G0030970	Rbpms	100	82.741	ENSTRUG00000000041	RBPMS	98	79.688	Takifugu_rubripes
MGP_CAROLIEiJ_G0030970	Rbpms	100	96.818	ENSTTRG00000012451	RBPMS	100	96.818	Tursiops_truncatus
MGP_CAROLIEiJ_G0030970	Rbpms	62	94.118	ENSUAMG00000026353	RBPMS	78	94.118	Ursus_americanus
MGP_CAROLIEiJ_G0030970	Rbpms	90	98.995	ENSUMAG00000007347	RBPMS	96	98.995	Ursus_maritimus
MGP_CAROLIEiJ_G0030970	Rbpms	90	99.495	ENSVPAG00000010991	RBPMS	100	99.495	Vicugna_pacos
MGP_CAROLIEiJ_G0030970	Rbpms	100	99.091	ENSVVUG00000019770	RBPMS	100	99.091	Vulpes_vulpes
MGP_CAROLIEiJ_G0030970	Rbpms	89	92.571	ENSXETG00000011290	rbpms	100	87.429	Xenopus_tropicalis
MGP_CAROLIEiJ_G0030970	Rbpms	100	75.127	ENSXCOG00000002436	RBPMS	99	71.066	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	ENSXMAG00000027637	RBPMS	99	78.974	Xiphophorus_maculatus