EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031052 (Gene tree)
Gene ID: 110300682
Gene Symbol: Neil3
Alias: -
Full Name: nei like DNA glycosylase 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 51373 bases
Position: chr8:46857526-46908898
Accession: 110300682
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0084438	zf-RanBP	PF00641.18	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0084442	-	3098	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0084443	-	379	-	MGP_CAROLIEiJ_P0084443	49 (aa)	-	UPI00015AA593
MGP_CAROLIEiJ_T0084440	-	785	-	MGP_CAROLIEiJ_P0084440	238 (aa)	-	-
MGP_CAROLIEiJ_T0084441	-	789	-	MGP_CAROLIEiJ_P0084441	197 (aa)	-	-
MGP_CAROLIEiJ_T0084439	-	814	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0084438	-	2256	XM_021170939	MGP_CAROLIEiJ_P0084438	606 (aa)	XP_021026598	UPI000A319014

Gene Model

Click here to download MGP_CAROLIEiJ_G0031052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031052's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031052	Neil3	100	74.092	ENSG00000109674	NEIL3	100	74.092	Homo_sapiens
MGP_CAROLIEiJ_G0031052	Neil3	100	50.820	ENSACIG00000002265	neil3	100	50.820	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031052	Neil3	100	50.243	ENSATEG00000004193	neil3	100	50.243	Anabas_testudineus
MGP_CAROLIEiJ_G0031052	Neil3	100	68.699	ENSANAG00000026464	NEIL3	100	68.699	Aotus_nancymaae
MGP_CAROLIEiJ_G0031052	Neil3	100	50.812	ENSACLG00000011270	neil3	100	50.812	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031052	Neil3	100	70.675	ENSBTAG00000005825	NEIL3	100	70.840	Bos_taurus
MGP_CAROLIEiJ_G0031052	Neil3	100	72.772	ENSCJAG00000005464	NEIL3	100	72.772	Callithrix_jacchus
MGP_CAROLIEiJ_G0031052	Neil3	100	71.334	ENSCHIG00000009157	NEIL3	100	71.334	Capra_hircus
MGP_CAROLIEiJ_G0031052	Neil3	100	72.772	ENSTSYG00000014680	NEIL3	100	72.772	Carlito_syrichta
MGP_CAROLIEiJ_G0031052	Neil3	85	73.489	ENSCAPG00000006333	NEIL3	98	73.489	Cavia_aperea
MGP_CAROLIEiJ_G0031052	Neil3	100	73.476	ENSCPOG00000003297	NEIL3	100	73.476	Cavia_porcellus
MGP_CAROLIEiJ_G0031052	Neil3	100	73.927	ENSCCAG00000018838	NEIL3	100	73.927	Cebus_capucinus
MGP_CAROLIEiJ_G0031052	Neil3	100	72.817	ENSCLAG00000015661	NEIL3	100	72.817	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031052	Neil3	100	72.772	ENSCSAG00000003064	NEIL3	100	72.772	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031052	Neil3	77	78.814	ENSCHOG00000008101	NEIL3	77	78.814	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031052	Neil3	100	72.937	ENSCANG00000043622	NEIL3	100	72.937	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031052	Neil3	100	50.962	ENSCSEG00000003828	neil3	99	50.962	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031052	Neil3	100	51.303	ENSDARG00000020079	neil3	100	51.303	Danio_rerio
MGP_CAROLIEiJ_G0031052	Neil3	86	72.937	ENSDNOG00000012236	NEIL3	100	72.937	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031052	Neil3	100	71.947	ENSEASG00005022272	NEIL3	100	71.947	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031052	Neil3	100	72.112	ENSECAG00000009121	NEIL3	100	72.112	Equus_caballus
MGP_CAROLIEiJ_G0031052	Neil3	75	62.775	ENSEEUG00000010848	NEIL3	100	62.775	Erinaceus_europaeus
MGP_CAROLIEiJ_G0031052	Neil3	100	71.005	ENSFCAG00000004956	NEIL3	100	71.005	Felis_catus
MGP_CAROLIEiJ_G0031052	Neil3	100	50.487	ENSHBUG00000023848	neil3	100	50.487	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031052	Neil3	86	72.745	ENSHGLG00000006643	NEIL3	100	72.745	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031052	Neil3	86	72.745	ENSHGLG00100006959	NEIL3	100	72.745	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031052	Neil3	100	72.982	ENSSTOG00000016245	NEIL3	100	72.982	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031052	Neil3	63	55.670	ENSLACG00000000308	NEIL3	99	55.670	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031052	Neil3	100	73.597	ENSMFAG00000002547	NEIL3	100	73.597	Macaca_fascicularis
MGP_CAROLIEiJ_G0031052	Neil3	100	73.762	ENSMMUG00000007394	NEIL3	100	73.762	Macaca_mulatta
MGP_CAROLIEiJ_G0031052	Neil3	100	73.432	ENSMNEG00000036177	NEIL3	100	73.432	Macaca_nemestrina
MGP_CAROLIEiJ_G0031052	Neil3	100	50.880	ENSMAMG00000017052	neil3	100	50.880	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031052	Neil3	100	50.812	ENSMZEG00005001680	neil3	100	50.812	Maylandia_zebra
MGP_CAROLIEiJ_G0031052	Neil3	90	61.101	ENSMODG00000003813	NEIL3	99	61.101	Monodelphis_domestica
MGP_CAROLIEiJ_G0031052	Neil3	100	95.215	ENSMUSG00000039396	Neil3	100	95.215	Mus_musculus
MGP_CAROLIEiJ_G0031052	Neil3	100	93.069	MGP_PahariEiJ_G0021518	Neil3	100	93.069	Mus_pahari
MGP_CAROLIEiJ_G0031052	Neil3	100	96.040	MGP_SPRETEiJ_G0032167	Neil3	100	96.040	Mus_spretus
MGP_CAROLIEiJ_G0031052	Neil3	100	49.672	ENSNBRG00000013229	neil3	100	49.672	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031052	Neil3	100	74.092	ENSNLEG00000016818	NEIL3	100	74.092	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031052	Neil3	100	72.982	ENSODEG00000004102	NEIL3	100	72.982	Octodon_degus
MGP_CAROLIEiJ_G0031052	Neil3	100	51.216	ENSONIG00000001176	neil3	100	51.216	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031052	Neil3	99	71.500	ENSOCUG00000001040	NEIL3	99	71.500	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031052	Neil3	100	47.812	ENSOMEG00000014798	neil3	100	47.812	Oryzias_melastigma
MGP_CAROLIEiJ_G0031052	Neil3	100	71.829	ENSOGAG00000012624	NEIL3	100	71.829	Otolemur_garnettii
MGP_CAROLIEiJ_G0031052	Neil3	96	69.707	ENSOARG00000006852	NEIL3	100	71.171	Ovis_aries
MGP_CAROLIEiJ_G0031052	Neil3	100	73.432	ENSPPAG00000035318	NEIL3	100	73.432	Pan_paniscus
MGP_CAROLIEiJ_G0031052	Neil3	100	71.334	ENSPPRG00000003958	NEIL3	100	71.334	Panthera_pardus
MGP_CAROLIEiJ_G0031052	Neil3	100	71.664	ENSPTIG00000012966	NEIL3	100	71.664	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031052	Neil3	100	74.587	ENSPTRG00000016617	NEIL3	100	74.587	Pan_troglodytes
MGP_CAROLIEiJ_G0031052	Neil3	100	73.927	ENSPANG00000014727	NEIL3	100	73.927	Papio_anubis
MGP_CAROLIEiJ_G0031052	Neil3	100	50.734	ENSPFOG00000018858	neil3	100	50.734	Poecilia_formosa
MGP_CAROLIEiJ_G0031052	Neil3	100	50.571	ENSPLAG00000010685	neil3	100	50.571	Poecilia_latipinna
MGP_CAROLIEiJ_G0031052	Neil3	100	50.897	ENSPMEG00000013971	neil3	100	50.897	Poecilia_mexicana
MGP_CAROLIEiJ_G0031052	Neil3	100	49.180	ENSPREG00000009841	neil3	100	49.180	Poecilia_reticulata
MGP_CAROLIEiJ_G0031052	Neil3	68	73.729	ENSPCAG00000006386	NEIL3	81	73.729	Procavia_capensis
MGP_CAROLIEiJ_G0031052	Neil3	88	62.536	ENSPCOG00000010888	NEIL3	100	62.536	Propithecus_coquereli
MGP_CAROLIEiJ_G0031052	Neil3	99	72.351	ENSPVAG00000002255	NEIL3	99	72.351	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031052	Neil3	100	50.984	ENSPNYG00000021276	neil3	100	50.984	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031052	Neil3	98	47.651	ENSPNAG00000019983	neil3	100	47.651	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031052	Neil3	100	86.469	ENSRNOG00000011688	Neil3	100	86.469	Rattus_norvegicus
MGP_CAROLIEiJ_G0031052	Neil3	100	73.267	ENSRBIG00000023002	NEIL3	100	73.267	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031052	Neil3	100	73.267	ENSRROG00000000069	NEIL3	100	73.267	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031052	Neil3	100	73.597	ENSSBOG00000032601	NEIL3	100	73.597	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031052	Neil3	100	65.359	ENSSHAG00000007680	NEIL3	100	65.359	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031052	Neil3	100	51.545	ENSSMAG00000009621	neil3	100	51.545	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031052	Neil3	100	70.675	ENSSSCG00000015771	NEIL3	100	70.675	Sus_scrofa
MGP_CAROLIEiJ_G0031052	Neil3	100	71.499	ENSTTRG00000013224	NEIL3	100	71.499	Tursiops_truncatus
MGP_CAROLIEiJ_G0031052	Neil3	100	64.638	ENSVPAG00000005020	NEIL3	100	64.638	Vicugna_pacos
MGP_CAROLIEiJ_G0031052	Neil3	88	48.593	ENSXCOG00000014831	neil3	96	48.593	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031052	Neil3	100	48.796	ENSXMAG00000028638	neil3	100	48.796	Xiphophorus_maculatus