EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031220 (Gene tree)
Gene ID: 110299656
Gene Symbol: Cherp
Alias: 5730408I11Rik|D8Wsu96e|DAN16|SCAF6
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 14146 bases
Position: chr8:64518970-64533115
Accession: 110299656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0085011	Surp	PF01805.20	8.9e-16	1	1
MGP_CAROLIEiJ_P0085011	G-patch	PF01585.23	7.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0085011	-	3786	XM_021169396	MGP_CAROLIEiJ_P0085011	935 (aa)	XP_021025055	UPI000A3191E0

Gene Model

Click here to download MGP_CAROLIEiJ_G0031220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031220's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031220	Cherp	99	94.685	ENSG00000085872	CHERP	99	94.469	Homo_sapiens
MGP_CAROLIEiJ_G0031220	Cherp	59	61.307	ENSAPOG00000009646	cherp	96	62.612	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031220	Cherp	99	65.998	ENSAOCG00000017846	cherp	79	66.186	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031220	Cherp	99	64.550	ENSAPEG00000021128	cherp	79	65.789	Amphiprion_percula
MGP_CAROLIEiJ_G0031220	Cherp	99	64.825	ENSATEG00000006341	cherp	99	65.000	Anabas_testudineus
MGP_CAROLIEiJ_G0031220	Cherp	76	82.427	ENSAPLG00000010773	CHERP	98	83.130	Anas_platyrhynchos
MGP_CAROLIEiJ_G0031220	Cherp	99	93.569	ENSANAG00000024284	CHERP	99	93.355	Aotus_nancymaae
MGP_CAROLIEiJ_G0031220	Cherp	99	65.820	ENSACLG00000020053	cherp	79	66.271	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031220	Cherp	99	67.471	ENSAMXG00000021637	cherp	93	67.537	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031220	Cherp	99	94.360	ENSBTAG00000005289	CHERP	99	94.035	Bos_taurus
MGP_CAROLIEiJ_G0031220	Cherp	99	93.462	ENSCJAG00000040462	CHERP	99	93.248	Callithrix_jacchus
MGP_CAROLIEiJ_G0031220	Cherp	99	94.902	ENSCAFG00000015671	CHERP	99	94.577	Canis_familiaris
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSCAFG00020009941	CHERP	99	93.355	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031220	Cherp	93	93.065	ENSCHIG00000013765	CHERP	95	96.739	Capra_hircus
MGP_CAROLIEiJ_G0031220	Cherp	92	90.187	ENSCAPG00000000910	CHERP	72	92.773	Cavia_aperea
MGP_CAROLIEiJ_G0031220	Cherp	100	94.118	ENSCPOG00000019949	CHERP	100	93.690	Cavia_porcellus
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSCCAG00000031534	CHERP	99	93.462	Cebus_capucinus
MGP_CAROLIEiJ_G0031220	Cherp	99	93.783	ENSCATG00000031409	CHERP	99	93.569	Cercocebus_atys
MGP_CAROLIEiJ_G0031220	Cherp	93	91.477	ENSCLAG00000005484	CHERP	99	91.364	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031220	Cherp	99	94.902	ENSCSAG00000005740	CHERP	99	94.685	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031220	Cherp	99	84.216	ENSCPBG00000014970	CHERP	99	83.892	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031220	Cherp	69	57.432	ENSCING00000004814	-	54	71.277	Ciona_intestinalis
MGP_CAROLIEiJ_G0031220	Cherp	99	95.011	ENSCANG00000032053	CHERP	99	94.794	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031220	Cherp	100	96.934	ENSCGRG00001023316	Cherp	100	96.934	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031220	Cherp	99	98.270	ENSCGRG00000015901	Cherp	99	98.270	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031220	Cherp	79	66.057	ENSCSEG00000019700	cherp	79	65.155	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031220	Cherp	76	65.797	ENSCVAG00000003622	cherp	93	66.209	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031220	Cherp	99	67.167	ENSDARG00000021812	cherp	100	75.472	Danio_rerio
MGP_CAROLIEiJ_G0031220	Cherp	98	89.394	ENSDORG00000027623	Cherp	100	89.286	Dipodomys_ordii
MGP_CAROLIEiJ_G0031220	Cherp	63	63.235	FBgn0261872	scaf6	55	63.235	Drosophila_melanogaster
MGP_CAROLIEiJ_G0031220	Cherp	81	93.304	ENSETEG00000019543	CHERP	83	93.304	Echinops_telfairi
MGP_CAROLIEiJ_G0031220	Cherp	99	94.902	ENSEASG00005000428	CHERP	91	94.577	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031220	Cherp	99	95.011	ENSECAG00000012713	CHERP	99	94.685	Equus_caballus
MGP_CAROLIEiJ_G0031220	Cherp	99	67.545	ENSELUG00000023026	cherp	80	67.500	Esox_lucius
MGP_CAROLIEiJ_G0031220	Cherp	99	93.783	ENSFCAG00000013172	CHERP	99	93.462	Felis_catus
MGP_CAROLIEiJ_G0031220	Cherp	80	83.893	ENSFALG00000013410	CHERP	86	83.351	Ficedula_albicollis
MGP_CAROLIEiJ_G0031220	Cherp	78	82.369	ENSFDAG00000015981	CHERP	81	79.868	Fukomys_damarensis
MGP_CAROLIEiJ_G0031220	Cherp	88	84.615	ENSFHEG00000009720	cherp	79	59.363	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031220	Cherp	79	83.558	ENSGALG00000003824	CHERP	88	83.027	Gallus_gallus
MGP_CAROLIEiJ_G0031220	Cherp	98	61.684	ENSGACG00000002053	cherp	98	60.883	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031220	Cherp	99	83.892	ENSGAGG00000014208	CHERP	99	83.676	Gopherus_agassizii
MGP_CAROLIEiJ_G0031220	Cherp	91	77.638	ENSGGOG00000016348	CHERP	99	82.122	Gorilla_gorilla
MGP_CAROLIEiJ_G0031220	Cherp	99	65.429	ENSHBUG00000007405	cherp	79	66.140	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031220	Cherp	100	92.620	ENSHGLG00000002993	CHERP	100	92.529	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031220	Cherp	59	80.742	ENSHGLG00100010390	CHERP	68	81.206	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031220	Cherp	79	65.132	ENSHCOG00000007691	cherp	79	63.789	Hippocampus_comes
MGP_CAROLIEiJ_G0031220	Cherp	99	67.591	ENSIPUG00000025008	cherp	99	67.910	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031220	Cherp	99	94.816	ENSSTOG00000012089	CHERP	100	94.816	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031220	Cherp	100	88.984	ENSJJAG00000017982	Cherp	81	94.737	Jaculus_jaculus
MGP_CAROLIEiJ_G0031220	Cherp	99	63.569	ENSKMAG00000009101	cherp	79	64.482	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031220	Cherp	85	63.035	ENSLBEG00000007586	cherp	91	64.822	Labrus_bergylta
MGP_CAROLIEiJ_G0031220	Cherp	100	80.208	ENSLACG00000018221	CHERP	80	74.413	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031220	Cherp	99	74.628	ENSLOCG00000003654	cherp	79	72.846	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031220	Cherp	99	91.549	ENSLAFG00000009096	CHERP	100	91.441	Loxodonta_africana
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSMFAG00000033267	CHERP	99	93.462	Macaca_fascicularis
MGP_CAROLIEiJ_G0031220	Cherp	99	89.925	ENSMMUG00000012958	CHERP	82	92.980	Macaca_mulatta
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSMNEG00000004125	CHERP	99	93.462	Macaca_nemestrina
MGP_CAROLIEiJ_G0031220	Cherp	92	97.598	ENSMLEG00000044337	CHERP	99	91.758	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031220	Cherp	99	65.645	ENSMAMG00000022269	cherp	79	66.016	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031220	Cherp	99	65.820	ENSMZEG00005018014	cherp	79	66.271	Maylandia_zebra
MGP_CAROLIEiJ_G0031220	Cherp	69	83.826	ENSMGAG00000005571	CHERP	97	81.069	Meleagris_gallopavo
MGP_CAROLIEiJ_G0031220	Cherp	100	96.406	ENSMAUG00000015856	Cherp	100	96.406	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031220	Cherp	99	92.625	ENSMICG00000004577	CHERP	99	93.275	Microcebus_murinus
MGP_CAROLIEiJ_G0031220	Cherp	100	97.861	ENSMOCG00000014697	Cherp	100	97.861	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031220	Cherp	98	66.028	ENSMMOG00000008525	cherp	81	66.579	Mola_mola
MGP_CAROLIEiJ_G0031220	Cherp	99	90.171	ENSMODG00000014938	CHERP	100	90.278	Monodelphis_domestica
MGP_CAROLIEiJ_G0031220	Cherp	99	65.748	ENSMALG00000020688	cherp	79	65.122	Monopterus_albus
MGP_CAROLIEiJ_G0031220	Cherp	100	99.680	ENSMUSG00000052488	Cherp	100	99.680	Mus_musculus
MGP_CAROLIEiJ_G0031220	Cherp	100	98.824	MGP_PahariEiJ_G0021685	Cherp	100	98.824	Mus_pahari
MGP_CAROLIEiJ_G0031220	Cherp	100	99.679	MGP_SPRETEiJ_G0032341	Cherp	100	99.679	Mus_spretus
MGP_CAROLIEiJ_G0031220	Cherp	79	94.858	ENSMPUG00000016023	CHERP	78	94.489	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031220	Cherp	79	88.410	ENSMLUG00000013881	CHERP	99	87.351	Myotis_lucifugus
MGP_CAROLIEiJ_G0031220	Cherp	99	95.699	ENSNGAG00000023323	Cherp	99	93.441	Nannospalax_galili
MGP_CAROLIEiJ_G0031220	Cherp	79	65.183	ENSNBRG00000001914	cherp	81	64.967	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031220	Cherp	99	95.119	ENSNLEG00000005536	CHERP	99	94.902	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031220	Cherp	89	92.764	ENSMEUG00000010840	CHERP	91	94.063	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031220	Cherp	79	93.460	ENSODEG00000001528	CHERP	81	93.052	Octodon_degus
MGP_CAROLIEiJ_G0031220	Cherp	99	64.774	ENSONIG00000007686	cherp	79	65.189	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031220	Cherp	99	63.541	ENSORLG00000000138	cherp	79	65.086	Oryzias_latipes
MGP_CAROLIEiJ_G0031220	Cherp	99	63.435	ENSORLG00020013142	cherp	86	73.294	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031220	Cherp	99	63.425	ENSORLG00015008911	cherp	79	64.822	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031220	Cherp	99	63.541	ENSOMEG00000016947	cherp	99	63.191	Oryzias_melastigma
MGP_CAROLIEiJ_G0031220	Cherp	100	92.423	ENSOGAG00000005834	CHERP	100	92.209	Otolemur_garnettii
MGP_CAROLIEiJ_G0031220	Cherp	99	83.801	ENSOARG00000018876	CHERP	79	83.400	Ovis_aries
MGP_CAROLIEiJ_G0031220	Cherp	99	93.569	ENSPPAG00000029195	CHERP	99	93.355	Pan_paniscus
MGP_CAROLIEiJ_G0031220	Cherp	99	93.783	ENSPPRG00000003275	CHERP	99	93.462	Panthera_pardus
MGP_CAROLIEiJ_G0031220	Cherp	98	67.939	ENSPTIG00000019778	CHERP	57	72.458	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031220	Cherp	99	94.794	ENSPTRG00000010647	CHERP	99	94.577	Pan_troglodytes
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSPANG00000011698	CHERP	99	93.462	Papio_anubis
MGP_CAROLIEiJ_G0031220	Cherp	98	83.550	ENSPSIG00000011974	CHERP	99	84.142	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031220	Cherp	99	63.231	ENSPMGG00000023606	cherp	88	89.024	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031220	Cherp	100	97.357	ENSPEMG00000011238	Cherp	100	97.357	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031220	Cherp	99	90.323	ENSPCIG00000019615	CHERP	95	90.323	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031220	Cherp	99	64.657	ENSPFOG00000016899	cherp	99	64.127	Poecilia_formosa
MGP_CAROLIEiJ_G0031220	Cherp	85	63.035	ENSPMEG00000002214	cherp	76	65.645	Poecilia_mexicana
MGP_CAROLIEiJ_G0031220	Cherp	99	64.513	ENSPREG00000020774	cherp	99	64.263	Poecilia_reticulata
MGP_CAROLIEiJ_G0031220	Cherp	99	88.937	ENSPPYG00000009691	CHERP	99	88.937	Pongo_abelii
MGP_CAROLIEiJ_G0031220	Cherp	99	83.623	ENSPCAG00000001337	CHERP	90	95.652	Procavia_capensis
MGP_CAROLIEiJ_G0031220	Cherp	64	98.485	ENSPCOG00000022788	CHERP	99	98.485	Propithecus_coquereli
MGP_CAROLIEiJ_G0031220	Cherp	99	85.466	ENSPVAG00000004320	CHERP	90	97.826	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031220	Cherp	99	65.503	ENSPNYG00000003942	cherp	79	65.744	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031220	Cherp	99	66.528	ENSPNAG00000017179	cherp	99	66.528	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031220	Cherp	100	99.037	ENSRNOG00000012323	Cherp	100	99.037	Rattus_norvegicus
MGP_CAROLIEiJ_G0031220	Cherp	99	93.991	ENSRBIG00000038621	CHERP	99	93.777	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSRROG00000040770	CHERP	99	93.462	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031220	Cherp	99	93.676	ENSSBOG00000014492	CHERP	99	93.462	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031220	Cherp	99	89.968	ENSSHAG00000010752	CHERP	99	90.255	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031220	Cherp	87	84.810	ENSSFOG00015008022	cherp	84	75.522	Scleropages_formosus
MGP_CAROLIEiJ_G0031220	Cherp	99	64.718	ENSSMAG00000005362	cherp	99	63.323	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031220	Cherp	99	67.903	ENSSDUG00000019712	cherp	79	68.831	Seriola_dumerili
MGP_CAROLIEiJ_G0031220	Cherp	99	67.797	ENSSLDG00000012659	cherp	79	69.474	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031220	Cherp	99	82.721	ENSSPUG00000008901	CHERP	99	82.721	Sphenodon_punctatus
MGP_CAROLIEiJ_G0031220	Cherp	99	66.843	ENSSPAG00000010681	cherp	79	65.065	Stegastes_partitus
MGP_CAROLIEiJ_G0031220	Cherp	99	95.119	ENSSSCG00000013860	CHERP	99	94.794	Sus_scrofa
MGP_CAROLIEiJ_G0031220	Cherp	99	85.157	ENSTGUG00000000680	CHERP	99	85.049	Taeniopygia_guttata
MGP_CAROLIEiJ_G0031220	Cherp	86	62.260	ENSTRUG00000007429	cherp	88	62.872	Takifugu_rubripes
MGP_CAROLIEiJ_G0031220	Cherp	100	62.304	ENSTNIG00000003363	cherp	80	62.934	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031220	Cherp	88	94.118	ENSTTRG00000015006	CHERP	89	93.687	Tursiops_truncatus
MGP_CAROLIEiJ_G0031220	Cherp	99	87.662	ENSUAMG00000017295	CHERP	80	93.204	Ursus_americanus
MGP_CAROLIEiJ_G0031220	Cherp	67	86.364	ENSUMAG00000000965	CHERP	70	83.648	Ursus_maritimus
MGP_CAROLIEiJ_G0031220	Cherp	99	92.743	ENSVVUG00000016546	CHERP	99	92.850	Vulpes_vulpes
MGP_CAROLIEiJ_G0031220	Cherp	55	83.821	ENSXETG00000002072	cherp	58	81.718	Xenopus_tropicalis