EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031312 (Gene tree)
Gene ID: 110299734
Gene Symbol: Farsa
Alias: 0610012A19Rik|Farsla
Full Name: phenylalanyl-tRNA synthetase subunit alpha
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 13146 bases
Position: chr8:76194161-76207306
Accession: 110299734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0085307	tRNA-synt_2d	PF01409.20	1.1e-90	1	1
MGP_CAROLIEiJ_P0085304	tRNA-synt_2d	PF01409.20	1.6e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0085306	-	3284	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0085307	-	1796	-	MGP_CAROLIEiJ_P0085307	507 (aa)	-	-
MGP_CAROLIEiJ_T0085304	-	1827	XM_021169532	MGP_CAROLIEiJ_P0085304	508 (aa)	XP_021025191	UPI000A315506
MGP_CAROLIEiJ_T0085305	-	1921	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0085308	-	1709	-	MGP_CAROLIEiJ_P0085308	105 (aa)	-	-
MGP_CAROLIEiJ_T0085309	-	731	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0031312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031312's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031312	Farsa	100	92.717	ENSG00000179115	FARSA	100	92.717	Homo_sapiens
MGP_CAROLIEiJ_G0031312	Farsa	98	76.815	ENSAPOG00000011465	farsa	99	76.815	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031312	Farsa	99	91.124	ENSAMEG00000012446	FARSA	99	91.124	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031312	Farsa	98	72.782	ENSACIG00000020499	farsa	99	72.782	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031312	Farsa	98	76.411	ENSAOCG00000000581	farsa	99	76.411	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031312	Farsa	98	76.210	ENSAPEG00000017695	farsa	99	76.210	Amphiprion_percula
MGP_CAROLIEiJ_G0031312	Farsa	98	63.783	ENSATEG00000012633	farsa	99	63.783	Anabas_testudineus
MGP_CAROLIEiJ_G0031312	Farsa	98	69.960	ENSATEG00000012807	farsa	99	69.960	Anabas_testudineus
MGP_CAROLIEiJ_G0031312	Farsa	96	80.527	ENSACAG00000017166	FARSA	81	80.833	Anolis_carolinensis
MGP_CAROLIEiJ_G0031312	Farsa	100	92.323	ENSANAG00000037420	FARSA	100	92.323	Aotus_nancymaae
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSACLG00000001716	farsa	99	77.218	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031312	Farsa	98	79.032	ENSAMXG00000037912	farsa	99	79.032	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.535	ENSBTAG00000021374	FARSA	100	91.535	Bos_taurus
MGP_CAROLIEiJ_G0031312	Farsa	94	61.053	WBGene00001497	fars-1	95	61.053	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0031312	Farsa	99	91.124	ENSCJAG00000004686	FARSA	100	86.220	Callithrix_jacchus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.535	ENSCAFG00000017096	FARSA	100	91.535	Canis_familiaris
MGP_CAROLIEiJ_G0031312	Farsa	100	91.535	ENSCAFG00020005315	FARSA	100	91.535	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031312	Farsa	100	85.380	ENSCHIG00000022617	FARSA	100	85.380	Capra_hircus
MGP_CAROLIEiJ_G0031312	Farsa	93	86.596	ENSTSYG00000002595	FARSA	85	86.596	Carlito_syrichta
MGP_CAROLIEiJ_G0031312	Farsa	91	91.957	ENSCAPG00000011353	FARSA	98	92.157	Cavia_aperea
MGP_CAROLIEiJ_G0031312	Farsa	100	91.732	ENSCPOG00000000787	FARSA	100	91.732	Cavia_porcellus
MGP_CAROLIEiJ_G0031312	Farsa	100	92.126	ENSCCAG00000028176	FARSA	100	92.126	Cebus_capucinus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.339	ENSCLAG00000015489	FARSA	100	91.339	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031312	Farsa	94	94.130	ENSCSAG00000006530	FARSA	100	94.130	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031312	Farsa	94	81.799	ENSCPBG00000023915	FARSA	95	81.799	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031312	Farsa	98	61.847	ENSCING00000002567	-	96	63.674	Ciona_intestinalis
MGP_CAROLIEiJ_G0031312	Farsa	98	62.450	ENSCSAVG00000010683	-	95	64.301	Ciona_savignyi
MGP_CAROLIEiJ_G0031312	Farsa	100	92.913	ENSCANG00000043649	-	100	92.913	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031312	Farsa	100	95.669	ENSCGRG00001019769	Farsa	100	95.669	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031312	Farsa	100	95.669	ENSCGRG00000013415	Farsa	100	95.669	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSCSEG00000016214	farsa	96	77.218	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031312	Farsa	98	75.806	ENSCVAG00000007907	farsa	99	75.806	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.823	ENSDARG00000098825	farsa	99	77.823	Danio_rerio
MGP_CAROLIEiJ_G0031312	Farsa	96	91.992	ENSDNOG00000032350	FARSA	99	91.992	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031312	Farsa	100	90.963	ENSDORG00000010118	Farsa	100	90.963	Dipodomys_ordii
MGP_CAROLIEiJ_G0031312	Farsa	97	62.753	FBgn0030007	alpha-PheRS	96	63.808	Drosophila_melanogaster
MGP_CAROLIEiJ_G0031312	Farsa	100	82.480	ENSETEG00000018673	FARSA	100	82.480	Echinops_telfairi
MGP_CAROLIEiJ_G0031312	Farsa	58	69.257	ENSEBUG00000008545	farsa	94	70.357	Eptatretus_burgeri
MGP_CAROLIEiJ_G0031312	Farsa	91	81.321	ENSEASG00005004093	FARSA	95	81.321	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031312	Farsa	100	92.717	ENSECAG00000015139	FARSA	95	92.717	Equus_caballus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSELUG00000010183	farsa	99	77.218	Esox_lucius
MGP_CAROLIEiJ_G0031312	Farsa	100	91.929	ENSFCAG00000023511	FARSA	100	91.929	Felis_catus
MGP_CAROLIEiJ_G0031312	Farsa	99	91.124	ENSFDAG00000005987	FARSA	100	91.124	Fukomys_damarensis
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSFHEG00000009382	farsa	94	77.218	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031312	Farsa	98	75.654	ENSGMOG00000018319	farsa	99	75.654	Gadus_morhua
MGP_CAROLIEiJ_G0031312	Farsa	97	74.949	ENSGALG00000040258	FARSA	84	75.992	Gallus_gallus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.419	ENSGAFG00000014146	farsa	99	77.419	Gambusia_affinis
MGP_CAROLIEiJ_G0031312	Farsa	98	76.660	ENSGACG00000006278	farsa	99	76.660	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031312	Farsa	97	80.847	ENSGAGG00000000753	FARSA	95	81.590	Gopherus_agassizii
MGP_CAROLIEiJ_G0031312	Farsa	99	92.899	ENSGGOG00000003418	FARSA	99	92.899	Gorilla_gorilla
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSHBUG00000019852	farsa	99	77.218	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031312	Farsa	99	91.865	ENSHGLG00000005213	FARSA	100	91.865	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031312	Farsa	99	91.865	ENSHGLG00100009586	FARSA	99	91.865	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031312	Farsa	98	76.008	ENSHCOG00000019548	farsa	99	76.008	Hippocampus_comes
MGP_CAROLIEiJ_G0031312	Farsa	98	78.226	ENSIPUG00000007635	farsa	99	78.226	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031312	Farsa	99	91.321	ENSSTOG00000008748	FARSA	100	91.321	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.419	ENSKMAG00000010698	farsa	99	77.419	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031312	Farsa	84	73.647	ENSLBEG00000001258	farsa	97	73.647	Labrus_bergylta
MGP_CAROLIEiJ_G0031312	Farsa	98	76.815	ENSLBEG00000006757	-	99	76.815	Labrus_bergylta
MGP_CAROLIEiJ_G0031312	Farsa	91	78.402	ENSLOCG00000008389	farsa	96	78.402	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.142	ENSLAFG00000016154	FARSA	100	91.142	Loxodonta_africana
MGP_CAROLIEiJ_G0031312	Farsa	100	93.110	ENSMFAG00000030595	FARSA	100	93.110	Macaca_fascicularis
MGP_CAROLIEiJ_G0031312	Farsa	100	93.110	ENSMMUG00000004390	FARSA	100	93.110	Macaca_mulatta
MGP_CAROLIEiJ_G0031312	Farsa	100	93.110	ENSMNEG00000043866	FARSA	100	93.110	Macaca_nemestrina
MGP_CAROLIEiJ_G0031312	Farsa	100	92.731	ENSMLEG00000029157	FARSA	100	92.731	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.823	ENSMAMG00000010636	farsa	99	77.823	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSMZEG00005002319	farsa	99	77.218	Maylandia_zebra
MGP_CAROLIEiJ_G0031312	Farsa	100	96.654	ENSMAUG00000009188	Farsa	100	96.654	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031312	Farsa	100	92.717	ENSMICG00000016272	FARSA	100	92.717	Microcebus_murinus
MGP_CAROLIEiJ_G0031312	Farsa	100	96.457	ENSMOCG00000011399	Farsa	100	96.457	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031312	Farsa	98	73.387	ENSMMOG00000006287	farsa	99	73.387	Mola_mola
MGP_CAROLIEiJ_G0031312	Farsa	98	85.887	ENSMODG00000011519	FARSA	100	85.887	Monodelphis_domestica
MGP_CAROLIEiJ_G0031312	Farsa	98	73.790	ENSMALG00000001972	farsa	95	79.018	Monopterus_albus
MGP_CAROLIEiJ_G0031312	Farsa	100	99.016	ENSMUSG00000003808	Farsa	100	99.016	Mus_musculus
MGP_CAROLIEiJ_G0031312	Farsa	100	98.819	MGP_PahariEiJ_G0022917	Farsa	100	98.819	Mus_pahari
MGP_CAROLIEiJ_G0031312	Farsa	100	99.213	MGP_SPRETEiJ_G0032431	Farsa	100	99.213	Mus_spretus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.339	ENSMPUG00000004400	FARSA	100	91.339	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031312	Farsa	99	90.909	ENSMLUG00000012767	FARSA	99	90.909	Myotis_lucifugus
MGP_CAROLIEiJ_G0031312	Farsa	73	96.477	ENSNGAG00000018353	Farsa	100	96.477	Nannospalax_galili
MGP_CAROLIEiJ_G0031312	Farsa	98	77.621	ENSNBRG00000010063	farsa	99	77.621	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031312	Farsa	100	91.929	ENSNLEG00000012899	FARSA	100	91.929	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031312	Farsa	98	85.081	ENSMEUG00000014253	FARSA	97	86.042	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031312	Farsa	100	91.142	ENSOPRG00000005004	FARSA	100	91.142	Ochotona_princeps
MGP_CAROLIEiJ_G0031312	Farsa	100	91.535	ENSODEG00000010433	FARSA	100	91.535	Octodon_degus
MGP_CAROLIEiJ_G0031312	Farsa	98	78.024	ENSONIG00000008075	farsa	99	78.024	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031312	Farsa	98	76.613	ENSORLG00000016406	farsa	90	76.613	Oryzias_latipes
MGP_CAROLIEiJ_G0031312	Farsa	98	76.815	ENSORLG00020021978	farsa	99	76.815	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031312	Farsa	98	76.815	ENSORLG00015015045	farsa	99	76.815	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031312	Farsa	98	76.613	ENSOMEG00000017367	farsa	94	77.708	Oryzias_melastigma
MGP_CAROLIEiJ_G0031312	Farsa	100	91.929	ENSOGAG00000012243	FARSA	100	91.929	Otolemur_garnettii
MGP_CAROLIEiJ_G0031312	Farsa	100	91.732	ENSOARG00000009991	FARSA	94	91.732	Ovis_aries
MGP_CAROLIEiJ_G0031312	Farsa	100	92.913	ENSPPAG00000034266	FARSA	100	92.913	Pan_paniscus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.929	ENSPPRG00000000346	FARSA	100	91.929	Panthera_pardus
MGP_CAROLIEiJ_G0031312	Farsa	93	92.979	ENSPTIG00000011502	FARSA	97	92.979	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031312	Farsa	100	92.913	ENSPTRG00000010550	FARSA	100	92.913	Pan_troglodytes
MGP_CAROLIEiJ_G0031312	Farsa	100	92.913	ENSPANG00000010978	FARSA	100	87.598	Papio_anubis
MGP_CAROLIEiJ_G0031312	Farsa	98	75.806	ENSPKIG00000007170	farsa	99	77.218	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031312	Farsa	88	76.339	ENSPSIG00000012701	FARSA	99	75.274	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031312	Farsa	98	71.774	ENSPMGG00000001401	farsa	99	71.774	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031312	Farsa	100	95.866	ENSPEMG00000012560	Farsa	100	95.866	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031312	Farsa	98	75.403	ENSPMAG00000008453	farsa	97	76.458	Petromyzon_marinus
MGP_CAROLIEiJ_G0031312	Farsa	98	86.290	ENSPCIG00000019294	FARSA	99	86.290	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.419	ENSPFOG00000001201	farsa	99	77.419	Poecilia_formosa
MGP_CAROLIEiJ_G0031312	Farsa	98	77.419	ENSPLAG00000018191	farsa	99	77.419	Poecilia_latipinna
MGP_CAROLIEiJ_G0031312	Farsa	98	77.621	ENSPMEG00000013547	farsa	99	77.621	Poecilia_mexicana
MGP_CAROLIEiJ_G0031312	Farsa	98	72.782	ENSPREG00000013620	farsa	99	72.782	Poecilia_reticulata
MGP_CAROLIEiJ_G0031312	Farsa	100	93.110	ENSPPYG00000009615	FARSA	100	93.110	Pongo_abelii
MGP_CAROLIEiJ_G0031312	Farsa	100	91.535	ENSPCAG00000015721	FARSA	100	91.535	Procavia_capensis
MGP_CAROLIEiJ_G0031312	Farsa	100	92.717	ENSPCOG00000014412	FARSA	100	92.717	Propithecus_coquereli
MGP_CAROLIEiJ_G0031312	Farsa	86	94.222	ENSPVAG00000014714	FARSA	86	94.222	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.218	ENSPNYG00000002144	farsa	99	77.218	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031312	Farsa	98	78.629	ENSPNAG00000000869	farsa	99	78.629	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031312	Farsa	100	98.425	ENSRNOG00000003149	Farsa	100	98.425	Rattus_norvegicus
MGP_CAROLIEiJ_G0031312	Farsa	100	92.717	ENSRBIG00000025585	FARSA	100	92.717	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031312	Farsa	100	92.717	ENSRROG00000040046	FARSA	100	87.402	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031312	Farsa	93	49.896	YFL022C	FRS2	93	50.424	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0031312	Farsa	100	92.323	ENSSBOG00000031362	FARSA	100	92.323	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031312	Farsa	88	86.353	ENSSHAG00000015006	FARSA	100	86.353	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031312	Farsa	98	75.806	ENSSFOG00015014864	farsa	99	75.806	Scleropages_formosus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.016	ENSSMAG00000002358	farsa	99	77.016	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031312	Farsa	98	76.008	ENSSDUG00000008631	farsa	99	76.008	Seriola_dumerili
MGP_CAROLIEiJ_G0031312	Farsa	98	76.008	ENSSLDG00000017108	farsa	99	76.008	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031312	Farsa	66	96.970	ENSSARG00000006579	-	70	89.644	Sorex_araneus
MGP_CAROLIEiJ_G0031312	Farsa	88	66.815	ENSSPUG00000012509	FARSA	96	67.191	Sphenodon_punctatus
MGP_CAROLIEiJ_G0031312	Farsa	98	77.016	ENSSPAG00000018292	farsa	92	77.016	Stegastes_partitus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.142	ENSSSCG00000013745	FARSA	100	91.142	Sus_scrofa
MGP_CAROLIEiJ_G0031312	Farsa	98	66.869	ENSTRUG00000010624	farsa	99	66.869	Takifugu_rubripes
MGP_CAROLIEiJ_G0031312	Farsa	98	71.169	ENSTNIG00000008330	farsa	99	71.169	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031312	Farsa	90	88.453	ENSTBEG00000000396	FARSA	100	88.453	Tupaia_belangeri
MGP_CAROLIEiJ_G0031312	Farsa	87	90.201	ENSTTRG00000003599	FARSA	87	90.201	Tursiops_truncatus
MGP_CAROLIEiJ_G0031312	Farsa	99	91.124	ENSUAMG00000010230	FARSA	99	91.124	Ursus_americanus
MGP_CAROLIEiJ_G0031312	Farsa	99	90.927	ENSUMAG00000006110	FARSA	99	90.927	Ursus_maritimus
MGP_CAROLIEiJ_G0031312	Farsa	100	91.535	ENSVVUG00000024145	FARSA	100	91.535	Vulpes_vulpes
MGP_CAROLIEiJ_G0031312	Farsa	98	75.952	ENSXETG00000007936	farsa	99	75.752	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031312	Farsa	98	69.014	ENSXCOG00000015512	farsa	99	69.014	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031312	Farsa	98	76.210	ENSXMAG00000008832	farsa	99	76.210	Xiphophorus_maculatus