EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0031362 (Gene tree)
Gene ID
110300466
Gene Symbol
Sall1
Alias
Msal-3
Full Name
spalt like transcription factor 1
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Minus strand
Length
16922 bases
Position
chr8:80561531-80578452
Accession
110300466
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0085482zf-C2H2PF00096.267.7e-3416
MGP_CAROLIEiJ_P0085482zf-C2H2PF00096.267.7e-3426
MGP_CAROLIEiJ_P0085482zf-C2H2PF00096.267.7e-3436
MGP_CAROLIEiJ_P0085482zf-C2H2PF00096.267.7e-3446
MGP_CAROLIEiJ_P0085482zf-C2H2PF00096.267.7e-3456
MGP_CAROLIEiJ_P0085482zf-C2H2PF00096.267.7e-3466
MGP_CAROLIEiJ_P0085482zf-metPF12874.71.5e-2415
MGP_CAROLIEiJ_P0085482zf-metPF12874.71.5e-2425
MGP_CAROLIEiJ_P0085482zf-metPF12874.71.5e-2435
MGP_CAROLIEiJ_P0085482zf-metPF12874.71.5e-2445
MGP_CAROLIEiJ_P0085482zf-metPF12874.71.5e-2455
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0085482-5255XM_021170654MGP_CAROLIEiJ_P00854821322 (aa)XP_021026313UPI000A315BD9
Gene Model
Click here to download MGP_CAROLIEiJ_G0031362's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031362's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0031362Sall19965.306MGP_CAROLIEiJ_G0022442Sall39965.306
MGP_CAROLIEiJ_G0031362Sall16053.704MGP_CAROLIEiJ_G0022445Zfp2366753.704
MGP_CAROLIEiJ_G0031362Sall19564.706MGP_CAROLIEiJ_G0024723Sall410064.706
MGP_CAROLIEiJ_G0031362Sall15835.789MGP_CAROLIEiJ_G0029143-7938.182
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0031362Sall110090.415ENSG00000103449SALL110090.736Homo_sapiens
MGP_CAROLIEiJ_G0031362Sall110067.556ENSAPOG00000022764sall1a9967.309Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031362Sall110089.040ENSAMEG00000006817SALL110089.191Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031362Sall110066.567ENSACIG00000004231sall1a9966.122Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031362Sall110067.556ENSAOCG00000002800sall1a9967.309Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031362Sall110067.630ENSAPEG00000010179sall1a9967.383Amphiprion_percula
MGP_CAROLIEiJ_G0031362Sall110066.963ENSATEG00000003006sall1a10066.773Anabas_testudineus
MGP_CAROLIEiJ_G0031362Sall110082.375ENSAPLG00000003356SALL19983.144Anas_platyrhynchos
MGP_CAROLIEiJ_G0031362Sall19979.589ENSACAG00000014399SALL19679.497Anolis_carolinensis
MGP_CAROLIEiJ_G0031362Sall110090.861ENSANAG00000027238SALL110090.861Aotus_nancymaae
MGP_CAROLIEiJ_G0031362Sall110066.469ENSACLG00000017148sall1a9966.122Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031362Sall110067.382ENSAMXG00000018599sall1a9967.015Astyanax_mexicanus
MGP_CAROLIEiJ_G0031362Sall19950.624ENSAMXG00000017702sall1b9950.810Astyanax_mexicanus
MGP_CAROLIEiJ_G0031362Sall110088.914ENSBTAG00000008544SALL110089.057Bos_taurus
MGP_CAROLIEiJ_G0031362Sall110091.088ENSCJAG00000001740SALL110091.088Callithrix_jacchus
MGP_CAROLIEiJ_G0031362Sall110090.113ENSCAFG00000009755SALL110090.264Canis_familiaris
MGP_CAROLIEiJ_G0031362Sall110090.113ENSCAFG00020002842SALL110090.264Canis_lupus_dingo
MGP_CAROLIEiJ_G0031362Sall110088.546ENSCHIG00000026074SALL110088.537Capra_hircus
MGP_CAROLIEiJ_G0031362Sall110091.019ENSTSYG00000029464SALL110090.930Carlito_syrichta
MGP_CAROLIEiJ_G0031362Sall19891.288ENSCPOG00000006564SALL110090.979Cavia_porcellus
MGP_CAROLIEiJ_G0031362Sall110087.840ENSCCAG00000001639SALL110087.689Cebus_capucinus
MGP_CAROLIEiJ_G0031362Sall110090.785ENSCATG00000004982SALL110090.785Cercocebus_atys
MGP_CAROLIEiJ_G0031362Sall110090.930ENSCLAG00000006380SALL110091.005Chinchilla_lanigera
MGP_CAROLIEiJ_G0031362Sall110089.879ENSCSAG00000005319SALL110089.879Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031362Sall16494.466ENSCHOG00000000800-6994.466Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031362Sall110083.069ENSCPBG00000015924SALL19984.176Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031362Sall110090.634ENSCANG00000036664SALL110090.954Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031362Sall110093.192ENSCGRG00001023314-10093.192Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031362Sall19893.056ENSCGRG00000009496Sall110093.056Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031362Sall110065.311ENSCSEG00000009349sall1a10065.778Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031362Sall19066.138ENSCVAG00000020513sall1a9965.609Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031362Sall110067.608ENSDARG00000074319sall1a10067.626Danio_rerio
MGP_CAROLIEiJ_G0031362Sall19945.954ENSDARG00000075891sall1b9946.251Danio_rerio
MGP_CAROLIEiJ_G0031362Sall110088.075ENSDNOG00000016413SALL110088.679Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031362Sall19887.895ENSETEG00000015150SALL110087.972Echinops_telfairi
MGP_CAROLIEiJ_G0031362Sall19935.826ENSEBUG00000008798SALL16843.860Eptatretus_burgeri
MGP_CAROLIEiJ_G0031362Sall19065.385ENSEBUG00000011732SALL19765.385Eptatretus_burgeri
MGP_CAROLIEiJ_G0031362Sall110089.947ENSEASG00005014602SALL110089.947Equus_asinus_asinus
MGP_CAROLIEiJ_G0031362Sall19187.656ENSECAG00000011334SALL19987.656Equus_caballus
MGP_CAROLIEiJ_G0031362Sall19888.701ENSEEUG00000002014SALL110088.624Erinaceus_europaeus
MGP_CAROLIEiJ_G0031362Sall110064.463ENSELUG00000006159sall1a10064.493Esox_lucius
MGP_CAROLIEiJ_G0031362Sall19950.852ENSELUG00000017774-9950.258Esox_lucius
MGP_CAROLIEiJ_G0031362Sall110088.462ENSFCAG00000024654SALL110089.015Felis_catus
MGP_CAROLIEiJ_G0031362Sall110081.859ENSFALG00000000074SALL19982.313Ficedula_albicollis
MGP_CAROLIEiJ_G0031362Sall110066.469ENSFHEG00000012579sall1a9966.196Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031362Sall17563.462ENSFHEG00000008424-9961.538Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031362Sall19742.004ENSGMOG00000013383-9941.893Gadus_morhua
MGP_CAROLIEiJ_G0031362Sall110065.382ENSGMOG00000006103sall1a9965.425Gadus_morhua
MGP_CAROLIEiJ_G0031362Sall110082.313ENSGALG00000039238SALL19982.766Gallus_gallus
MGP_CAROLIEiJ_G0031362Sall110067.089ENSGAFG00000009964sall1a9966.840Gambusia_affinis
MGP_CAROLIEiJ_G0031362Sall110066.098ENSGACG00000016702sall1a10066.024Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031362Sall110082.691ENSGAGG00000013979SALL19983.768Gopherus_agassizii
MGP_CAROLIEiJ_G0031362Sall110090.642ENSGGOG00000000663SALL110090.717Gorilla_gorilla
MGP_CAROLIEiJ_G0031362Sall110066.469ENSHBUG00000022005sall1a9966.122Haplochromis_burtoni
MGP_CAROLIEiJ_G0031362Sall110091.232ENSHGLG00000004288-10091.232Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031362Sall110091.232ENSHGLG00100017496SALL110091.232Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031362Sall110065.530ENSHCOG00000000974sall1a9965.674Hippocampus_comes
MGP_CAROLIEiJ_G0031362Sall19967.961ENSIPUG00000016265SALL19967.191Ictalurus_punctatus
MGP_CAROLIEiJ_G0031362Sall19949.515ENSIPUG00000022928sall1b9949.442Ictalurus_punctatus
MGP_CAROLIEiJ_G0031362Sall110091.170ENSSTOG00000020885SALL110090.491Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031362Sall110066.444ENSKMAG00000016681sall1a9966.246Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031362Sall19766.206ENSLBEG00000012207sall1a9565.723Labrus_bergylta
MGP_CAROLIEiJ_G0031362Sall110076.417ENSLACG00000003556SALL19976.568Latimeria_chalumnae
MGP_CAROLIEiJ_G0031362Sall19739.334ENSLACG00000014018-9339.920Latimeria_chalumnae
MGP_CAROLIEiJ_G0031362Sall110071.770ENSLOCG00000007283sall1b9971.450Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031362Sall19888.521ENSLAFG00000015251SALL110087.982Loxodonta_africana
MGP_CAROLIEiJ_G0031362Sall110090.861ENSMFAG00000003298SALL110090.861Macaca_fascicularis
MGP_CAROLIEiJ_G0031362Sall19391.035ENSMMUG00000017200SALL110091.035Macaca_mulatta
MGP_CAROLIEiJ_G0031362Sall19390.879ENSMNEG00000034770SALL110090.879Macaca_nemestrina
MGP_CAROLIEiJ_G0031362Sall110090.710ENSMLEG00000036406SALL110090.954Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031362Sall110067.306ENSMAMG00000004164sall1a10067.134Mastacembelus_armatus
MGP_CAROLIEiJ_G0031362Sall110066.469ENSMZEG00005006479sall1a9966.122Maylandia_zebra
MGP_CAROLIEiJ_G0031362Sall19882.435ENSMGAG00000004704SALL19982.897Meleagris_gallopavo
MGP_CAROLIEiJ_G0031362Sall110092.063ENSMAUG00000019093Sall110092.063Mesocricetus_auratus
MGP_CAROLIEiJ_G0031362Sall110089.267ENSMICG00000036486SALL110089.267Microcebus_murinus
MGP_CAROLIEiJ_G0031362Sall110066.345ENSMMOG00000016400sall1a10066.197Mola_mola
MGP_CAROLIEiJ_G0031362Sall110086.017ENSMODG00000013114SALL110085.865Monodelphis_domestica
MGP_CAROLIEiJ_G0031362Sall110067.136ENSMALG00000013400sall1a10067.087Monopterus_albus
MGP_CAROLIEiJ_G0031362Sall110099.019ENSMUSG00000031665Sall110099.019Mus_musculus
MGP_CAROLIEiJ_G0031362Sall110097.358MGP_PahariEiJ_G0022961Sall110097.358Mus_pahari
MGP_CAROLIEiJ_G0031362Sall110099.019MGP_SPRETEiJ_G0032480Sall110099.019Mus_spretus
MGP_CAROLIEiJ_G0031362Sall19887.548ENSMPUG00000003265SALL19786.986Mustela_putorius_furo
MGP_CAROLIEiJ_G0031362Sall19882.722ENSMLUG00000015541SALL110082.951Myotis_lucifugus
MGP_CAROLIEiJ_G0031362Sall110066.716ENSNBRG00000009307sall1a9966.368Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031362Sall19496.667ENSNLEG00000001008SALL110096.667Nomascus_leucogenys
MGP_CAROLIEiJ_G0031362Sall110085.650ENSMEUG00000012206SALL110085.185Notamacropus_eugenii
MGP_CAROLIEiJ_G0031362Sall18893.567ENSOPRG00000005645SALL17493.431Ochotona_princeps
MGP_CAROLIEiJ_G0031362Sall110091.005ENSODEG00000003685SALL110091.005Octodon_degus
MGP_CAROLIEiJ_G0031362Sall110066.940ENSONIG00000002831sall1a9966.592Oreochromis_niloticus
MGP_CAROLIEiJ_G0031362Sall18987.925ENSOANG00000013399SALL19986.207Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031362Sall110066.543ENSORLG00000013827sall1a10066.568Oryzias_latipes
MGP_CAROLIEiJ_G0031362Sall110066.469ENSORLG00020020570sall1a10066.494Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031362Sall110066.691ENSORLG00015018830sall1a10066.617Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031362Sall110066.617ENSOMEG00000016043sall1a9966.691Oryzias_melastigma
MGP_CAROLIEiJ_G0031362Sall110089.720ENSOGAG00000027316SALL110090.023Otolemur_garnettii
MGP_CAROLIEiJ_G0031362Sall110083.208ENSOARG00000017583SALL110083.196Ovis_aries
MGP_CAROLIEiJ_G0031362Sall19989.634ENSPPAG00000035657SALL110089.832Pan_paniscus
MGP_CAROLIEiJ_G0031362Sall19868.052ENSPPAG00000035136-9968.514Pan_paniscus
MGP_CAROLIEiJ_G0031362Sall110088.537ENSPPRG00000023283SALL110089.097Panthera_pardus
MGP_CAROLIEiJ_G0031362Sall18495.619ENSPTIG00000013539-9695.619Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031362Sall110090.354ENSPTRG00000008108SALL110090.008Pan_troglodytes
MGP_CAROLIEiJ_G0031362Sall19668.504ENSPTRG00000045256-9869.025Pan_troglodytes
MGP_CAROLIEiJ_G0031362Sall110090.785ENSPANG00000024176SALL110090.861Papio_anubis
MGP_CAROLIEiJ_G0031362Sall110065.071ENSPKIG00000022251sall1a9964.970Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031362Sall110064.918ENSPKIG00000005383-10064.763Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031362Sall110082.691ENSPSIG00000008582SALL19983.069Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031362Sall110064.594ENSPMGG00000021788sall1a10064.805Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031362Sall19950.992ENSPMAG00000008148sall1b9951.318Petromyzon_marinus
MGP_CAROLIEiJ_G0031362Sall110085.801ENSPCIG00000017840SALL110085.336Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031362Sall19866.616ENSPFOG00000015799sall1a9666.616Poecilia_formosa
MGP_CAROLIEiJ_G0031362Sall110066.741ENSPLAG00000022539sall1a10066.691Poecilia_latipinna
MGP_CAROLIEiJ_G0031362Sall110066.889ENSPMEG00000020894sall1a10066.716Poecilia_mexicana
MGP_CAROLIEiJ_G0031362Sall110066.741ENSPREG00000006802sall1a10066.568Poecilia_reticulata
MGP_CAROLIEiJ_G0031362Sall19090.076ENSPPYG00000007345SALL19690.076Pongo_abelii
MGP_CAROLIEiJ_G0031362Sall18493.827ENSPCAG00000008162SALL19393.827Procavia_capensis
MGP_CAROLIEiJ_G0031362Sall110089.350ENSPCOG00000028192SALL110089.502Propithecus_coquereli
MGP_CAROLIEiJ_G0031362Sall16789.720ENSPVAG00000015374SALL110090.888Pteropus_vampyrus
MGP_CAROLIEiJ_G0031362Sall110066.543ENSPNYG00000010865sall1a9966.196Pundamilia_nyererei
MGP_CAROLIEiJ_G0031362Sall19953.264ENSPNAG00000007442sall1b9952.971Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031362Sall110065.801ENSPNAG00000023644sall1a9965.370Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031362Sall19863.462ENSPNAG00000028248-9965.306Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031362Sall110095.102ENSRNOG00000013907Sall110095.102Rattus_norvegicus
MGP_CAROLIEiJ_G0031362Sall19391.198ENSRBIG00000015707SALL110091.198Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031362Sall19990.160ENSRROG00000035777SALL110091.198Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031362Sall110090.861ENSSBOG00000032186SALL110090.861Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031362Sall110085.023ENSSHAG00000009477SALL110084.883Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031362Sall19865.779ENSSFOG00015001590sall1a9965.878Scleropages_formosus
MGP_CAROLIEiJ_G0031362Sall110065.405ENSSFOG00015020020sall1a9965.379Scleropages_formosus
MGP_CAROLIEiJ_G0031362Sall110067.039ENSSMAG00000009160sall1a10066.691Scophthalmus_maximus
MGP_CAROLIEiJ_G0031362Sall110067.333ENSSDUG00000006507sall1a10067.013Seriola_dumerili
MGP_CAROLIEiJ_G0031362Sall17659.184ENSSDUG00000000748sall1b8459.184Seriola_dumerili
MGP_CAROLIEiJ_G0031362Sall110067.407ENSSLDG00000017721sall1a10067.087Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031362Sall19889.008ENSSARG00000000661SALL110089.094Sorex_araneus
MGP_CAROLIEiJ_G0031362Sall110082.615ENSSPUG00000000156SALL19982.993Sphenodon_punctatus
MGP_CAROLIEiJ_G0031362Sall110067.383ENSSPAG00000021615sall1a9967.185Stegastes_partitus
MGP_CAROLIEiJ_G0031362Sall110088.696ENSSSCG00000002836SALL110088.847Sus_scrofa
MGP_CAROLIEiJ_G0031362Sall110082.162ENSTGUG00000007514SALL19982.615Taeniopygia_guttata
MGP_CAROLIEiJ_G0031362Sall19164.915ENSTRUG00000008950sall1a10065.182Takifugu_rubripes
MGP_CAROLIEiJ_G0031362Sall19264.490ENSTNIG00000004257sall1a10064.065Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031362Sall173100.000ENSTBEG00000002119-55100.000Tupaia_belangeri
MGP_CAROLIEiJ_G0031362Sall19088.710ENSUAMG00000023379-9288.879Ursus_americanus
MGP_CAROLIEiJ_G0031362Sall19088.926ENSVVUG00000019383-9989.096Vulpes_vulpes
MGP_CAROLIEiJ_G0031362Sall110073.599ENSXETG00000018417sall110073.378Xenopus_tropicalis
MGP_CAROLIEiJ_G0031362Sall17661.538ENSXETG00000017176sall26061.538Xenopus_tropicalis
MGP_CAROLIEiJ_G0031362Sall110066.815ENSXMAG00000016273sall1a9966.691Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us