EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031430 (Gene tree)
Gene ID: 110300884
Gene Symbol: Cnot1
Alias: 6030411K04Rik
Full Name: CCR4-NOT transcription complex%2C subunit 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 88517 bases
Position: chr8:87199408-87287924
Accession: 2442402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0085686	Not1	PF04054.15	2e-152	1	1
MGP_CAROLIEiJ_P0085685	Not1	PF04054.15	2.8e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0085686	-	8545	-	MGP_CAROLIEiJ_P0085686	2436 (aa)	-	-
MGP_CAROLIEiJ_T0085685	-	8395	-	MGP_CAROLIEiJ_P0085685	2386 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0031430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031430's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSAPOG00000005042	cnot1	98	96.190	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSAMEG00000017298	CNOT1	95	99.777	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031430	Cnot1	84	94.196	ENSACIG00000016003	cnot1	96	94.196	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSAPEG00000022342	cnot1	95	96.190	Amphiprion_percula
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSATEG00000012892	cnot1	98	96.190	Anabas_testudineus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSAPLG00000007162	CNOT1	95	99.048	Anas_platyrhynchos
MGP_CAROLIEiJ_G0031430	Cnot1	84	98.095	ENSACAG00000001602	CNOT1	93	98.095	Anolis_carolinensis
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSANAG00000038198	CNOT1	95	98.095	Aotus_nancymaae
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSACLG00000014234	cnot1	98	96.190	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031430	Cnot1	92	97.143	ENSAMXG00000013170	cnot1	95	97.143	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSBTAG00000020782	CNOT1	95	99.889	Bos_taurus
MGP_CAROLIEiJ_G0031430	Cnot1	75	40.725	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSCJAG00000011318	CNOT1	95	99.889	Callithrix_jacchus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.114	ENSCAFG00000008426	CNOT1	95	99.114	Canis_familiaris
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	ENSCAFG00020010156	CNOT1	98	99.048	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSCHIG00000010452	CNOT1	95	99.889	Capra_hircus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSTSYG00000006888	CNOT1	95	99.889	Carlito_syrichta
MGP_CAROLIEiJ_G0031430	Cnot1	91	99.666	ENSCPOG00000013026	CNOT1	94	99.666	Cavia_porcellus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSCCAG00000026333	CNOT1	95	99.889	Cebus_capucinus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSCATG00000032625	CNOT1	95	99.889	Cercocebus_atys
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSCLAG00000006289	CNOT1	95	99.777	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSCSAG00000004731	CNOT1	95	99.889	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031430	Cnot1	72	100.000	ENSCHOG00000009712	CNOT1	76	100.000	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031430	Cnot1	90	98.551	ENSCPBG00000026222	CNOT1	97	98.333	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031430	Cnot1	92	76.374	ENSCING00000009149	-	95	76.374	Ciona_intestinalis
MGP_CAROLIEiJ_G0031430	Cnot1	83	74.385	ENSCSAVG00000002414	-	99	74.385	Ciona_savignyi
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	ENSCANG00000040534	CNOT1	95	99.883	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	ENSCGRG00001016365	Cnot1	95	100.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	ENSCGRG00000001714	Cnot1	95	100.000	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSCVAG00000018930	cnot1	98	96.190	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	97.143	ENSDARG00000004174	cnot1	95	97.143	Danio_rerio
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSDNOG00000013250	CNOT1	95	99.048	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031430	Cnot1	87	54.125	FBgn0085436	Not1	90	54.007	Drosophila_melanogaster
MGP_CAROLIEiJ_G0031430	Cnot1	76	99.048	ENSETEG00000012806	CNOT1	78	99.048	Echinops_telfairi
MGP_CAROLIEiJ_G0031430	Cnot1	73	87.619	ENSEBUG00000011534	cnot1	88	87.619	Eptatretus_burgeri
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSEASG00005005819	CNOT1	95	99.048	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSECAG00000009889	CNOT1	98	99.048	Equus_caballus
MGP_CAROLIEiJ_G0031430	Cnot1	86	99.204	ENSEEUG00000006015	CNOT1	88	99.204	Erinaceus_europaeus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSELUG00000014085	cnot1	95	96.190	Esox_lucius
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.116	ENSFCAG00000025155	CNOT1	95	99.889	Felis_catus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSFALG00000007285	CNOT1	95	99.048	Ficedula_albicollis
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSFDAG00000013399	CNOT1	95	99.777	Fukomys_damarensis
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSFHEG00000020574	cnot1	95	95.238	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031430	Cnot1	84	95.231	ENSGMOG00000012864	cnot1	95	95.231	Gadus_morhua
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSGALG00000002301	CNOT1	95	99.048	Gallus_gallus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSGAFG00000015005	cnot1	95	96.190	Gambusia_affinis
MGP_CAROLIEiJ_G0031430	Cnot1	84	94.792	ENSGACG00000002606	cnot1	100	95.631	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSGAGG00000022646	CNOT1	95	99.048	Gopherus_agassizii
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSGGOG00000009547	CNOT1	95	99.889	Gorilla_gorilla
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSHBUG00000001729	cnot1	98	96.190	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSHGLG00000014322	CNOT1	95	99.777	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSHCOG00000006501	cnot1	95	96.190	Hippocampus_comes
MGP_CAROLIEiJ_G0031430	Cnot1	92	97.143	ENSIPUG00000011915	cnot1	95	97.143	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSSTOG00000005490	CNOT1	95	99.777	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.414	ENSJJAG00000000633	Cnot1	95	99.414	Jaculus_jaculus
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSKMAG00000006149	cnot1	95	95.238	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031430	Cnot1	87	96.407	ENSLBEG00000004740	cnot1	95	96.407	Labrus_bergylta
MGP_CAROLIEiJ_G0031430	Cnot1	92	97.882	ENSLACG00000010869	CNOT1	95	97.882	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSLOCG00000006324	cnot1	95	98.095	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.556	ENSLAFG00000000098	CNOT1	95	99.556	Loxodonta_africana
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSMFAG00000035888	CNOT1	95	99.889	Macaca_fascicularis
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSMMUG00000014625	CNOT1	95	99.889	Macaca_mulatta
MGP_CAROLIEiJ_G0031430	Cnot1	89	99.883	ENSMNEG00000031820	CNOT1	96	99.889	Macaca_nemestrina
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSMLEG00000040933	CNOT1	95	98.095	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSMAMG00000016524	cnot1	95	96.190	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	97.115	ENSMZEG00005016210	cnot1	99	97.115	Maylandia_zebra
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSMGAG00000001908	CNOT1	95	99.048	Meleagris_gallopavo
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSMICG00000007071	CNOT1	95	99.777	Microcebus_murinus
MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	ENSMOCG00000017969	Cnot1	97	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSMMOG00000019134	cnot1	98	96.190	Mola_mola
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSMODG00000014199	CNOT1	95	99.048	Monodelphis_domestica
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.000	ENSMALG00000008645	cnot1	95	95.000	Monopterus_albus
MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	ENSMUSG00000036550	Cnot1	95	100.000	Mus_musculus
MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	MGP_PahariEiJ_G0023028	Cnot1	95	100.000	Mus_pahari
MGP_CAROLIEiJ_G0031430	Cnot1	92	100.000	MGP_SPRETEiJ_G0032549	Cnot1	95	100.000	Mus_spretus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSMPUG00000004830	CNOT1	95	99.889	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSMLUG00000003728	CNOT1	95	99.889	Myotis_lucifugus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSNGAG00000018628	Cnot1	95	99.889	Nannospalax_galili
MGP_CAROLIEiJ_G0031430	Cnot1	87	98.592	ENSNBRG00000019358	cnot1	97	98.592	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSNLEG00000003566	CNOT1	95	99.889	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031430	Cnot1	79	97.763	ENSMEUG00000006145	CNOT1	83	97.763	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031430	Cnot1	79	100.000	ENSOPRG00000005604	CNOT1	82	100.000	Ochotona_princeps
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSODEG00000016337	CNOT1	95	99.777	Octodon_degus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSONIG00000007358	cnot1	95	96.190	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031430	Cnot1	84	99.048	ENSOANG00000012109	CNOT1	96	98.885	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSOCUG00000006911	CNOT1	95	99.889	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSORLG00000013734	cnot1	95	95.238	Oryzias_latipes
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSORLG00020017012	cnot1	95	95.238	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSORLG00015007091	cnot1	95	95.238	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSOMEG00000015124	cnot1	95	95.238	Oryzias_melastigma
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSOGAG00000000543	CNOT1	95	99.777	Otolemur_garnettii
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSOARG00000001567	CNOT1	95	99.889	Ovis_aries
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSPPAG00000022013	CNOT1	95	99.889	Pan_paniscus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSPPRG00000004867	CNOT1	95	99.889	Panthera_pardus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSPTIG00000012589	CNOT1	95	99.889	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	ENSPTRG00000008183	CNOT1	95	99.883	Pan_troglodytes
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSPANG00000020901	CNOT1	95	98.095	Papio_anubis
MGP_CAROLIEiJ_G0031430	Cnot1	92	89.231	ENSPKIG00000002914	CNOT1	98	86.667	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSPKIG00000023538	CNOT1	95	98.095	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSPSIG00000005499	CNOT1	95	99.048	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031430	Cnot1	92	88.571	ENSPMAG00000009381	cnot1	94	88.571	Petromyzon_marinus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSPCIG00000007343	CNOT1	98	99.048	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031430	Cnot1	91	96.190	ENSPFOG00000003497	cnot1	95	96.190	Poecilia_formosa
MGP_CAROLIEiJ_G0031430	Cnot1	87	96.190	ENSPLAG00000014018	cnot1	95	96.190	Poecilia_latipinna
MGP_CAROLIEiJ_G0031430	Cnot1	87	97.115	ENSPMEG00000005868	cnot1	96	97.115	Poecilia_mexicana
MGP_CAROLIEiJ_G0031430	Cnot1	87	96.190	ENSPREG00000018793	cnot1	95	96.190	Poecilia_reticulata
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	ENSPPYG00000007410	CNOT1	95	99.777	Pongo_abelii
MGP_CAROLIEiJ_G0031430	Cnot1	82	98.834	ENSPCAG00000003241	CNOT1	85	98.834	Procavia_capensis
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	ENSPCOG00000027139	CNOT1	95	99.883	Propithecus_coquereli
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSPVAG00000004243	CNOT1	95	99.048	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSPNYG00000012919	cnot1	98	96.190	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031430	Cnot1	92	97.143	ENSPNAG00000000246	cnot1	95	97.143	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSRNOG00000012271	Cnot1	95	99.889	Rattus_norvegicus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	ENSRBIG00000044598	CNOT1	95	99.883	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSRROG00000000906	CNOT1	95	99.889	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031430	Cnot1	52	30.271	YCR093W	CDC39	61	38.397	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSSBOG00000029155	CNOT1	95	98.095	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSSHAG00000012187	CNOT1	95	99.048	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSSFOG00015017614	cnot1	95	98.095	Scleropages_formosus
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.652	ENSSMAG00000013844	cnot1	98	95.238	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSSDUG00000021491	cnot1	98	96.190	Seriola_dumerili
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSSLDG00000014816	cnot1	98	96.190	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031430	Cnot1	76	100.000	ENSSARG00000000762	CNOT1	80	100.000	Sorex_araneus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSSPAG00000018802	cnot1	95	96.190	Stegastes_partitus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.666	ENSSSCG00000002799	CNOT1	98	99.048	Sus_scrofa
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSTGUG00000005919	CNOT1	95	99.048	Taeniopygia_guttata
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSTNIG00000018706	cnot1	95	95.238	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031430	Cnot1	72	100.000	ENSTBEG00000000720	CNOT1	75	100.000	Tupaia_belangeri
MGP_CAROLIEiJ_G0031430	Cnot1	87	99.889	ENSTTRG00000008460	CNOT1	90	99.889	Tursiops_truncatus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSUAMG00000009251	CNOT1	95	99.889	Ursus_americanus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	ENSUMAG00000021291	CNOT1	95	99.889	Ursus_maritimus
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.048	ENSVPAG00000008846	CNOT1	94	99.048	Vicugna_pacos
MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	ENSVVUG00000024037	CNOT1	98	99.048	Vulpes_vulpes
MGP_CAROLIEiJ_G0031430	Cnot1	92	98.095	ENSXETG00000015900	cnot1	95	98.095	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031430	Cnot1	92	95.238	ENSXCOG00000013552	cnot1	95	95.238	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031430	Cnot1	92	96.190	ENSXMAG00000006031	cnot1	95	96.190	Xiphophorus_maculatus