EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031563 (Gene tree)
Gene ID: 110300119
Gene Symbol: Sf3b3
Alias: 1810061H24Rik|5730409A01Rik|D8Ertd633e|RSE1|SAP130
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 35430 bases
Position: chr8:101897559-101932988
Accession: 110300119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0086019	CPSF_A	PF03178.15	1.2e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0086019	-	4304	XM_021170181	MGP_CAROLIEiJ_P0086019	1217 (aa)	XP_021025840	UPI000A316BCF

Gene Model

Click here to download MGP_CAROLIEiJ_G0031563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
MGP_CAROLIEiJ_G0031563	Sf3b3	96	93.510	ENSAPOG00000006172	sf3b3	98	93.510	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.508	ENSAMEG00000002187	SF3B3	100	99.508	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031563	Sf3b3	92	90.625	ENSACIG00000016487	sf3b3	100	90.625	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.426	ENSAOCG00000007158	sf3b3	100	93.426	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.426	ENSAPEG00000022786	sf3b3	100	93.426	Amphiprion_percula
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.509	ENSATEG00000013708	sf3b3	100	93.509	Anabas_testudineus
MGP_CAROLIEiJ_G0031563	Sf3b3	81	97.974	ENSAPLG00000004996	SF3B3	100	97.974	Anas_platyrhynchos
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.521	ENSACAG00000001817	SF3B3	100	98.521	Anolis_carolinensis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSANAG00000028001	SF3B3	100	99.836	Aotus_nancymaae
MGP_CAROLIEiJ_G0031563	Sf3b3	96	93.168	ENSACLG00000022555	sf3b3	98	93.168	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	ENSAMXG00000003410	sf3b3	100	93.098	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSBTAG00000010627	SF3B3	100	99.836	Bos_taurus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	60.456	WBGene00019323	teg-4	100	60.456	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSCJAG00000014773	SF3B3	99	99.836	Callithrix_jacchus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSCAFG00000020151	SF3B3	100	99.753	Canis_familiaris
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSCAFG00020020912	SF3B3	100	99.753	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSCHIG00000019822	SF3B3	100	99.753	Capra_hircus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSTSYG00000007910	SF3B3	100	99.836	Carlito_syrichta
MGP_CAROLIEiJ_G0031563	Sf3b3	84	89.016	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.521	ENSCPOG00000000586	SF3B3	100	98.521	Cavia_porcellus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSCCAG00000017736	SF3B3	100	99.836	Cebus_capucinus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSCATG00000036562	SF3B3	100	99.836	Cercocebus_atys
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSCLAG00000003921	SF3B3	100	99.836	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSCSAG00000004371	SF3B3	100	99.753	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031563	Sf3b3	90	92.835	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.767	ENSCPBG00000015853	SF3B3	100	98.767	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	80.706	ENSCING00000001342	-	100	80.706	Ciona_intestinalis
MGP_CAROLIEiJ_G0031563	Sf3b3	99	79.392	ENSCSAVG00000011454	-	100	79.392	Ciona_savignyi
MGP_CAROLIEiJ_G0031563	Sf3b3	100	96.549	ENSCANG00000042920	SF3B3	100	96.549	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.918	ENSCGRG00001015908	Sf3b3	100	99.918	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.918	ENSCGRG00000010180	Sf3b3	100	99.918	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031563	Sf3b3	82	92.515	ENSCSEG00000014192	sf3b3	99	92.515	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.523	ENSCVAG00000010459	sf3b3	100	92.523	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.344	ENSDARG00000103553	sf3b3	100	93.344	Danio_rerio
MGP_CAROLIEiJ_G0031563	Sf3b3	85	99.807	ENSDNOG00000043626	SF3B3	100	99.807	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSDORG00000014176	Sf3b3	100	99.836	Dipodomys_ordii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	74.980	FBgn0035162	Sf3b3	100	74.980	Drosophila_melanogaster
MGP_CAROLIEiJ_G0031563	Sf3b3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
MGP_CAROLIEiJ_G0031563	Sf3b3	100	87.757	ENSEBUG00000006117	sf3b3	100	87.757	Eptatretus_burgeri
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSEASG00005013376	SF3B3	100	99.753	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSECAG00000014053	SF3B3	100	99.753	Equus_caballus
MGP_CAROLIEiJ_G0031563	Sf3b3	93	99.286	ENSEEUG00000015611	SF3B3	93	99.286	Erinaceus_europaeus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	91.311	ENSELUG00000015417	sf3b3	100	91.311	Esox_lucius
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSFCAG00000009487	SF3B3	100	99.753	Felis_catus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.767	ENSFALG00000007372	SF3B3	100	98.767	Ficedula_albicollis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSFDAG00000002608	SF3B3	100	99.753	Fukomys_damarensis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.933	ENSFHEG00000017824	sf3b3	100	92.933	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	89.327	ENSGMOG00000008139	sf3b3	100	89.327	Gadus_morhua
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.014	ENSGALG00000002531	SF3B3	100	99.014	Gallus_gallus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.523	ENSGAFG00000015206	sf3b3	100	92.523	Gambusia_affinis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.939	ENSGACG00000002646	sf3b3	100	92.939	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031563	Sf3b3	96	98.804	ENSGAGG00000006746	SF3B3	97	98.804	Gopherus_agassizii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSGGOG00000003246	SF3B3	100	99.836	Gorilla_gorilla
MGP_CAROLIEiJ_G0031563	Sf3b3	92	85.714	ENSHBUG00000005960	sf3b3	100	86.875	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSHGLG00000010135	SF3B3	100	99.836	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031563	Sf3b3	100	97.648	ENSHGLG00100011148	SF3B3	100	97.648	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.605	ENSHCOG00000011981	sf3b3	100	92.605	Hippocampus_comes
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.016	ENSIPUG00000020435	sf3b3	100	93.016	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSSTOG00000007065	SF3B3	100	99.836	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSJJAG00000003948	Sf3b3	100	99.836	Jaculus_jaculus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	90.797	ENSKMAG00000004066	sf3b3	99	92.997	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.933	ENSLBEG00000018302	sf3b3	100	92.933	Labrus_bergylta
MGP_CAROLIEiJ_G0031563	Sf3b3	98	92.359	ENSLACG00000012501	SF3B3	99	92.359	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031563	Sf3b3	100	94.007	ENSLOCG00000007566	sf3b3	100	94.007	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSLAFG00000012219	SF3B3	100	99.753	Loxodonta_africana
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSMFAG00000045487	SF3B3	100	99.836	Macaca_fascicularis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSMMUG00000017812	SF3B3	100	99.836	Macaca_mulatta
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSMNEG00000033385	SF3B3	100	99.836	Macaca_nemestrina
MGP_CAROLIEiJ_G0031563	Sf3b3	100	96.302	ENSMLEG00000043891	SF3B3	97	99.363	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.509	ENSMAMG00000016837	sf3b3	100	93.509	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	ENSMZEG00005010836	sf3b3	100	93.098	Maylandia_zebra
MGP_CAROLIEiJ_G0031563	Sf3b3	89	90.194	ENSMZEG00005026015	sf3b3	99	90.194	Maylandia_zebra
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.014	ENSMGAG00000001597	SF3B3	100	99.014	Meleagris_gallopavo
MGP_CAROLIEiJ_G0031563	Sf3b3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.687	ENSMICG00000001363	SF3B3	100	98.687	Microcebus_murinus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.918	ENSMOCG00000006108	Sf3b3	100	99.918	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031563	Sf3b3	89	90.472	ENSMMOG00000002598	sf3b3	97	90.472	Mola_mola
MGP_CAROLIEiJ_G0031563	Sf3b3	100	95.156	ENSMODG00000014363	SF3B3	100	95.156	Monodelphis_domestica
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.180	ENSMALG00000008014	sf3b3	100	93.180	Monopterus_albus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.918	ENSMUSG00000033732	Sf3b3	100	99.918	Mus_musculus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.836	Mus_spretus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSMPUG00000010277	SF3B3	100	99.753	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSMLUG00000014607	SF3B3	100	99.753	Myotis_lucifugus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSNGAG00000021903	Sf3b3	100	99.836	Nannospalax_galili
MGP_CAROLIEiJ_G0031563	Sf3b3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.358	ENSNLEG00000016127	SF3B3	99	99.363	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031563	Sf3b3	92	98.417	ENSMEUG00000004479	SF3B3	94	98.417	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031563	Sf3b3	98	96.563	ENSOPRG00000009847	SF3B3	100	96.563	Ochotona_princeps
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSODEG00000014154	SF3B3	100	99.753	Octodon_degus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.344	ENSONIG00000011198	sf3b3	100	93.344	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.507	ENSOANG00000001161	-	100	99.507	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	97.453	ENSOCUG00000004139	SF3B3	100	97.453	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	ENSORLG00000013472	sf3b3	100	93.098	Oryzias_latipes
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	ENSORLG00020017473	sf3b3	100	93.098	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.098	ENSORLG00015007710	sf3b3	100	93.098	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.769	ENSOMEG00000014483	sf3b3	100	92.769	Oryzias_melastigma
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.426	ENSOGAG00000016051	SF3B3	100	99.426	Otolemur_garnettii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.508	ENSOARG00000004816	SF3B3	100	99.508	Ovis_aries
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSPPAG00000026807	SF3B3	100	99.836	Pan_paniscus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSPPRG00000001686	SF3B3	100	99.753	Panthera_pardus
MGP_CAROLIEiJ_G0031563	Sf3b3	89	96.688	ENSPTIG00000020382	SF3B3	100	96.688	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSPTRG00000008308	SF3B3	100	99.836	Pan_troglodytes
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSPANG00000024075	SF3B3	100	99.836	Papio_anubis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.687	ENSPKIG00000002712	sf3b3	100	92.687	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031563	Sf3b3	89	98.804	ENSPSIG00000002232	SF3B3	100	98.804	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.918	ENSPEMG00000008603	Sf3b3	100	99.918	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	91.783	ENSPMAG00000001793	sf3b3	100	91.783	Petromyzon_marinus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.507	ENSPCIG00000014927	SF3B3	100	99.507	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.605	ENSPFOG00000015516	sf3b3	100	92.605	Poecilia_formosa
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.605	ENSPLAG00000014330	sf3b3	100	92.605	Poecilia_latipinna
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.687	ENSPMEG00000019856	sf3b3	100	92.687	Poecilia_mexicana
MGP_CAROLIEiJ_G0031563	Sf3b3	81	93.496	ENSPREG00000019669	sf3b3	97	93.496	Poecilia_reticulata
MGP_CAROLIEiJ_G0031563	Sf3b3	95	99.708	ENSPPYG00000007539	SF3B3	100	99.708	Pongo_abelii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	78.061	ENSPCAG00000002623	SF3B3	100	78.061	Procavia_capensis
MGP_CAROLIEiJ_G0031563	Sf3b3	84	100.000	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.671	ENSPVAG00000000684	SF3B3	100	99.671	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.180	ENSPNYG00000003528	sf3b3	100	93.180	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.426	ENSPNAG00000015419	sf3b3	100	93.426	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.918	ENSRNOG00000017724	Sf3b3	100	99.918	Rattus_norvegicus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSRBIG00000021904	SF3B3	100	99.836	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSRROG00000045703	SF3B3	100	99.836	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	ENSSBOG00000029156	SF3B3	100	99.836	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.507	ENSSHAG00000000372	SF3B3	100	99.507	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.673	ENSSFOG00015012877	sf3b3	100	93.673	Scleropages_formosus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.851	ENSSMAG00000014386	sf3b3	100	92.851	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.591	ENSSDUG00000021201	sf3b3	100	93.591	Seriola_dumerili
MGP_CAROLIEiJ_G0031563	Sf3b3	100	93.509	ENSSLDG00000017532	sf3b3	100	93.509	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031563	Sf3b3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.850	ENSSPUG00000006253	SF3B3	100	98.850	Sphenodon_punctatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	85.703	ENSSPAG00000003125	sf3b3	100	85.703	Stegastes_partitus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSSSCG00000025323	SF3B3	100	99.753	Sus_scrofa
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.933	ENSTGUG00000006082	SF3B3	100	98.933	Taeniopygia_guttata
MGP_CAROLIEiJ_G0031563	Sf3b3	89	93.015	ENSTNIG00000004857	sf3b3	100	93.015	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031563	Sf3b3	93	84.683	ENSTBEG00000002946	SF3B3	100	84.683	Tupaia_belangeri
MGP_CAROLIEiJ_G0031563	Sf3b3	100	98.932	ENSTTRG00000005855	SF3B3	100	98.932	Tursiops_truncatus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSUAMG00000006780	SF3B3	100	99.753	Ursus_americanus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.753	ENSUMAG00000017757	SF3B3	100	99.753	Ursus_maritimus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	83.566	ENSVPAG00000003202	SF3B3	100	83.566	Vicugna_pacos
MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.671	ENSVVUG00000017922	SF3B3	100	99.671	Vulpes_vulpes
MGP_CAROLIEiJ_G0031563	Sf3b3	100	96.713	ENSXETG00000032869	SF3B3	100	96.713	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031563	Sf3b3	77	94.055	ENSXCOG00000013628	sf3b3	97	94.055	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.605	ENSXMAG00000006334	sf3b3	99	93.699	Xiphophorus_maculatus