EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031579 (Gene tree)
Gene ID: 110300490
Gene Symbol: Zfp1
Alias: Fnp-1|Zfp-1|mkr-1
Full Name: ZFP1 zinc finger protein
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 38430 bases
Position: chr8:102745120-102783549
Accession: 110300490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	1	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	2	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	3	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	4	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	5	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	6	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	7	8
MGP_CAROLIEiJ_P0086093	zf-C2H2	PF00096.26	1.2e-51	8	8
MGP_CAROLIEiJ_P0086093	zf-met	PF12874.7	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0086093	-	1860	XM_021170678	MGP_CAROLIEiJ_P0086093	403 (aa)	XP_021026337	UPI000A3146F9

Gene Model

Click here to download MGP_CAROLIEiJ_G0031579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0031579	Zfp1	67	46.964	MGP_CAROLIEiJ_G0016391	Zfp672	90	46.964
MGP_CAROLIEiJ_G0031579	Zfp1	79	34.201	MGP_CAROLIEiJ_G0031420	Zfp319	90	34.812
MGP_CAROLIEiJ_G0031579	Zfp1	75	39.791	MGP_CAROLIEiJ_G0029143	-	80	39.286
MGP_CAROLIEiJ_G0031579	Zfp1	60	43.956	MGP_CAROLIEiJ_G0029146	Zfp784	78	43.956
MGP_CAROLIEiJ_G0031579	Zfp1	99	53.061	MGP_CAROLIEiJ_G0016306	Zfp354a	98	53.061
MGP_CAROLIEiJ_G0031579	Zfp1	98	43.103	MGP_CAROLIEiJ_G0024261	Zfp661	96	43.103
MGP_CAROLIEiJ_G0031579	Zfp1	67	40.260	MGP_CAROLIEiJ_G0028463	Prdm5	67	50.847
MGP_CAROLIEiJ_G0031579	Zfp1	99	46.324	MGP_CAROLIEiJ_G0029427	-	98	46.324
MGP_CAROLIEiJ_G0031579	Zfp1	68	48.193	MGP_CAROLIEiJ_G0022445	Zfp236	59	48.193
MGP_CAROLIEiJ_G0031579	Zfp1	99	48.092	MGP_CAROLIEiJ_G0021132	Zfp948	97	48.092
MGP_CAROLIEiJ_G0031579	Zfp1	60	42.424	MGP_CAROLIEiJ_G0028343	Repin1	92	42.424
MGP_CAROLIEiJ_G0031579	Zfp1	80	52.968	MGP_CAROLIEiJ_G0029324	Zfp111	74	52.968
MGP_CAROLIEiJ_G0031579	Zfp1	98	43.144	MGP_CAROLIEiJ_G0018660	-	76	43.144
MGP_CAROLIEiJ_G0031579	Zfp1	98	41.967	MGP_CAROLIEiJ_G0018661	Zfp759	99	42.739
MGP_CAROLIEiJ_G0031579	Zfp1	99	46.739	MGP_CAROLIEiJ_G0020389	Zfp597	96	46.739
MGP_CAROLIEiJ_G0031579	Zfp1	64	43.137	MGP_CAROLIEiJ_G0024724	Zfp64	70	43.137
MGP_CAROLIEiJ_G0031579	Zfp1	99	52.697	MGP_CAROLIEiJ_G0029612	Zfp141	76	52.697
MGP_CAROLIEiJ_G0031579	Zfp1	89	67.500	MGP_CAROLIEiJ_G0029614	Zfp715	75	67.500
MGP_CAROLIEiJ_G0031579	Zfp1	63	49.485	MGP_CAROLIEiJ_G0027176	Zbtb49	60	48.611
MGP_CAROLIEiJ_G0031579	Zfp1	79	52.252	MGP_CAROLIEiJ_G0030498	Zfp768	51	52.018
MGP_CAROLIEiJ_G0031579	Zfp1	99	40.206	MGP_CAROLIEiJ_G0016437	Zfp867	95	40.000
MGP_CAROLIEiJ_G0031579	Zfp1	98	50.554	MGP_CAROLIEiJ_G0029329	Zfp94	96	50.554
MGP_CAROLIEiJ_G0031579	Zfp1	78	57.534	MGP_CAROLIEiJ_G0029321	Zfp112	71	57.534
MGP_CAROLIEiJ_G0031579	Zfp1	79	53.191	MGP_CAROLIEiJ_G0029322	Zfp235	68	53.191
MGP_CAROLIEiJ_G0031579	Zfp1	79	50.206	MGP_CAROLIEiJ_G0029327	Zfp93	72	50.206
MGP_CAROLIEiJ_G0031579	Zfp1	90	59.091	MGP_CAROLIEiJ_G0029326	Zfp108	78	59.091
MGP_CAROLIEiJ_G0031579	Zfp1	78	58.824	MGP_CAROLIEiJ_G0029490	Zfp420	99	58.824
MGP_CAROLIEiJ_G0031579	Zfp1	60	52.071	MGP_CAROLIEiJ_G0018274	Zkscan4	55	52.071
MGP_CAROLIEiJ_G0031579	Zfp1	98	45.413	MGP_CAROLIEiJ_G0030502	-	92	45.413
MGP_CAROLIEiJ_G0031579	Zfp1	98	45.413	MGP_CAROLIEiJ_G0030501	Zfp764	92	45.413
MGP_CAROLIEiJ_G0031579	Zfp1	98	47.522	MGP_CAROLIEiJ_G0019949	Zfp251	94	47.522
MGP_CAROLIEiJ_G0031579	Zfp1	99	50.781	MGP_CAROLIEiJ_G0015655	-	93	50.781
MGP_CAROLIEiJ_G0031579	Zfp1	99	43.431	MGP_CAROLIEiJ_G0031203	Zfp882	99	45.349
MGP_CAROLIEiJ_G0031579	Zfp1	67	40.526	MGP_CAROLIEiJ_G0029356	Zfp574	71	42.391
MGP_CAROLIEiJ_G0031579	Zfp1	60	46.429	MGP_CAROLIEiJ_G0029135	Zfp628	60	46.073
MGP_CAROLIEiJ_G0031579	Zfp1	98	41.919	MGP_CAROLIEiJ_G0018683	Zfp493	92	41.919
MGP_CAROLIEiJ_G0031579	Zfp1	99	49.012	MGP_CAROLIEiJ_G0021128	Zfp51	91	49.012
MGP_CAROLIEiJ_G0031579	Zfp1	67	42.083	MGP_CAROLIEiJ_G0026744	Zbtb17	55	46.512
MGP_CAROLIEiJ_G0031579	Zfp1	60	46.457	MGP_CAROLIEiJ_G0027508	Gfi1	100	46.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.386	ENSG00000184517	ZFP1	100	86.386	Homo_sapiens
MGP_CAROLIEiJ_G0031579	Zfp1	99	84.367	ENSAMEG00000001261	ZFP1	99	84.367	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSANAG00000028644	ZFP1	100	86.634	Aotus_nancymaae
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.891	ENSBTAG00000000868	ZFP1	100	85.891	Bos_taurus
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.386	ENSCJAG00000014349	ZFP1	100	86.386	Callithrix_jacchus
MGP_CAROLIEiJ_G0031579	Zfp1	99	84.864	ENSCAFG00000020085	ZFP1	100	84.864	Canis_familiaris
MGP_CAROLIEiJ_G0031579	Zfp1	99	84.826	ENSCAFG00020001547	ZFP1	99	84.826	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031579	Zfp1	100	85.185	ENSCHIG00000015281	ZFP1	100	85.185	Capra_hircus
MGP_CAROLIEiJ_G0031579	Zfp1	100	85.891	ENSTSYG00000029077	ZFP1	100	85.891	Carlito_syrichta
MGP_CAROLIEiJ_G0031579	Zfp1	99	84.131	ENSCPOG00000000634	ZFP1	99	84.131	Cavia_porcellus
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSCCAG00000031497	ZFP1	100	86.634	Cebus_capucinus
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSCATG00000039477	ZFP1	100	86.634	Cercocebus_atys
MGP_CAROLIEiJ_G0031579	Zfp1	88	84.034	ENSCLAG00000004223	ZFP1	99	84.034	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031579	Zfp1	99	87.000	ENSCSAG00000003718	ZFP1	99	87.000	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031579	Zfp1	99	78.392	ENSCHOG00000003880	ZFP1	98	78.392	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSCANG00000038483	ZFP1	100	86.634	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031579	Zfp1	100	90.819	ENSCGRG00001010967	Zfp1	100	90.819	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031579	Zfp1	100	90.571	ENSCGRG00000016788	-	100	90.571	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031579	Zfp1	89	84.874	ENSDNOG00000006405	-	100	84.874	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031579	Zfp1	86	79.656	ENSDNOG00000010525	-	100	79.656	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031579	Zfp1	99	82.412	ENSDORG00000011934	Zfp1	99	82.412	Dipodomys_ordii
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.323	ENSEASG00005013460	ZFP1	99	85.323	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.323	ENSECAG00000014727	ZFP1	99	85.323	Equus_caballus
MGP_CAROLIEiJ_G0031579	Zfp1	100	84.653	ENSFCAG00000024047	ZFP1	100	84.653	Felis_catus
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.139	ENSGGOG00000006121	ZFP1	100	86.139	Gorilla_gorilla
MGP_CAROLIEiJ_G0031579	Zfp1	99	86.398	ENSHGLG00000016406	-	99	86.398	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.139	ENSHGLG00100004688	-	99	85.139	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031579	Zfp1	91	85.286	ENSSTOG00000022317	ZFP1	100	85.286	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.464	ENSJJAG00000019878	Zfp1	99	85.530	Jaculus_jaculus
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.464	ENSLAFG00000003125	ZFP1	100	85.464	Loxodonta_africana
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSMFAG00000001812	ZFP1	100	86.634	Macaca_fascicularis
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSMMUG00000011587	ZFP1	100	86.634	Macaca_mulatta
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSMNEG00000041941	ZFP1	100	86.634	Macaca_nemestrina
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSMLEG00000021950	ZFP1	100	86.634	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031579	Zfp1	99	88.586	ENSMAUG00000007745	Zfp1	100	88.586	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031579	Zfp1	100	85.608	ENSMICG00000015124	ZFP1	100	85.608	Microcebus_murinus
MGP_CAROLIEiJ_G0031579	Zfp1	99	87.970	ENSMOCG00000002761	Zfp1	100	87.970	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031579	Zfp1	100	97.270	ENSMUSG00000055835	Zfp1	100	97.270	Mus_musculus
MGP_CAROLIEiJ_G0031579	Zfp1	100	95.782	MGP_PahariEiJ_G0023178	Zfp1	100	95.782	Mus_pahari
MGP_CAROLIEiJ_G0031579	Zfp1	100	96.774	MGP_SPRETEiJ_G0032697	Zfp1	100	96.774	Mus_spretus
MGP_CAROLIEiJ_G0031579	Zfp1	100	84.158	ENSMPUG00000009946	ZFP1	99	84.158	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031579	Zfp1	99	82.836	ENSMLUG00000002042	ZFP1	100	82.836	Myotis_lucifugus
MGP_CAROLIEiJ_G0031579	Zfp1	99	86.750	ENSNGAG00000016319	Zfp1	98	86.750	Nannospalax_galili
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSNLEG00000013001	ZFP1	100	86.634	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031579	Zfp1	100	83.168	ENSOPRG00000006123	ZFP1	100	83.168	Ochotona_princeps
MGP_CAROLIEiJ_G0031579	Zfp1	98	85.642	ENSODEG00000014404	ZFP1	99	85.642	Octodon_degus
MGP_CAROLIEiJ_G0031579	Zfp1	99	83.879	ENSOCUG00000001924	ZFP1	100	83.879	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.000	ENSOGAG00000001902	ZFP1	98	85.000	Otolemur_garnettii
MGP_CAROLIEiJ_G0031579	Zfp1	100	85.432	ENSOARG00000006461	ZFP1	100	85.432	Ovis_aries
MGP_CAROLIEiJ_G0031579	Zfp1	100	85.891	ENSPPAG00000033168	ZFP1	100	85.891	Pan_paniscus
MGP_CAROLIEiJ_G0031579	Zfp1	100	84.653	ENSPPRG00000007804	ZFP1	100	84.653	Panthera_pardus
MGP_CAROLIEiJ_G0031579	Zfp1	100	84.158	ENSPTIG00000009843	ZFP1	100	84.158	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.386	ENSPTRG00000008354	ZFP1	100	86.386	Pan_troglodytes
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.881	ENSPANG00000016568	ZFP1	100	86.881	Papio_anubis
MGP_CAROLIEiJ_G0031579	Zfp1	100	85.891	ENSPPYG00000007556	ZFP1	100	85.891	Pongo_abelii
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.714	ENSPCAG00000007561	ZFP1	99	85.714	Procavia_capensis
MGP_CAROLIEiJ_G0031579	Zfp1	92	84.636	ENSPCOG00000023041	ZFP1	100	84.636	Propithecus_coquereli
MGP_CAROLIEiJ_G0031579	Zfp1	99	92.481	ENSRNOG00000019059	Zfp1	99	92.481	Rattus_norvegicus
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.881	ENSRBIG00000039257	ZFP1	100	86.881	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.881	ENSRROG00000042823	ZFP1	100	86.881	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031579	Zfp1	100	86.634	ENSSBOG00000020206	ZFP1	100	86.634	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031579	Zfp1	99	83.168	ENSSARG00000013922	ZFP1	100	83.168	Sorex_araneus
MGP_CAROLIEiJ_G0031579	Zfp1	100	84.938	ENSSSCG00000022668	ZFP1	100	84.938	Sus_scrofa
MGP_CAROLIEiJ_G0031579	Zfp1	88	84.314	ENSTBEG00000011217	ZFP1	100	84.314	Tupaia_belangeri
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.714	ENSTTRG00000008949	ZFP1	99	85.714	Tursiops_truncatus
MGP_CAROLIEiJ_G0031579	Zfp1	99	84.864	ENSUAMG00000017632	ZFP1	100	84.864	Ursus_americanus
MGP_CAROLIEiJ_G0031579	Zfp1	99	84.864	ENSUMAG00000014322	ZFP1	100	84.864	Ursus_maritimus
MGP_CAROLIEiJ_G0031579	Zfp1	88	83.754	ENSVPAG00000012526	ZFP1	99	83.754	Vicugna_pacos
MGP_CAROLIEiJ_G0031579	Zfp1	99	85.075	ENSVVUG00000024277	ZFP1	99	85.075	Vulpes_vulpes