EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031850 (Gene tree)
Gene ID: 110301742
Gene Symbol: Ppan
Alias: A230087P06Rik|SSF1
Full Name: suppressor of SWI4 1 homolog
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 3822 bases
Position: chr9:16887670-16891491
Accession: 110301742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0086906	Brix	PF04427.18	3.6e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0086910	-	532	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0086911	-	395	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0086907	-	1161	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0086906	-	1677	XM_021172370	MGP_CAROLIEiJ_P0086906	470 (aa)	XP_021028029	UPI000A3145A3
MGP_CAROLIEiJ_T0086909	-	1837	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0086908	-	655	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0031850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031850's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031850	Ppan	97	76.035	ENSG00000130810	PPAN	99	89.952	Homo_sapiens
MGP_CAROLIEiJ_G0031850	Ppan	97	76.253	ENSG00000243207	PPAN-P2RY11	87	76.253	Homo_sapiens
MGP_CAROLIEiJ_G0031850	Ppan	93	59.688	ENSAPOG00000017687	ppan	83	59.688	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031850	Ppan	99	83.153	ENSAMEG00000011989	-	98	83.153	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031850	Ppan	96	58.628	ENSACIG00000007417	ppan	77	62.195	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031850	Ppan	97	58.710	ENSAOCG00000005416	ppan	86	58.710	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031850	Ppan	97	58.190	ENSAPEG00000010382	ppan	86	58.190	Amphiprion_percula
MGP_CAROLIEiJ_G0031850	Ppan	88	62.954	ENSATEG00000021221	ppan	78	63.325	Anabas_testudineus
MGP_CAROLIEiJ_G0031850	Ppan	89	66.194	ENSACAG00000003838	-	78	66.194	Anolis_carolinensis
MGP_CAROLIEiJ_G0031850	Ppan	92	71.889	ENSANAG00000038012	-	98	76.190	Aotus_nancymaae
MGP_CAROLIEiJ_G0031850	Ppan	93	74.439	ENSANAG00000020371	-	100	72.377	Aotus_nancymaae
MGP_CAROLIEiJ_G0031850	Ppan	97	55.882	ENSACLG00000019215	ppan	90	55.882	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031850	Ppan	87	58.981	ENSAMXG00000032540	ppan	75	58.981	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031850	Ppan	97	81.897	ENSBTAG00000012745	PPAN	99	81.897	Bos_taurus
MGP_CAROLIEiJ_G0031850	Ppan	83	37.186	WBGene00003062	lpd-6	79	36.052	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0031850	Ppan	98	72.549	ENSCJAG00000039296	PPAN	97	72.549	Callithrix_jacchus
MGP_CAROLIEiJ_G0031850	Ppan	93	85.812	ENSCAFG00000017917	P2RY11	78	85.812	Canis_familiaris
MGP_CAROLIEiJ_G0031850	Ppan	96	84.547	ENSCAFG00020023621	-	98	83.190	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031850	Ppan	97	82.328	ENSCHIG00000006450	-	99	82.328	Capra_hircus
MGP_CAROLIEiJ_G0031850	Ppan	59	89.697	ENSTSYG00000034845	-	87	89.697	Carlito_syrichta
MGP_CAROLIEiJ_G0031850	Ppan	79	80.697	ENSCPOG00000025539	-	99	80.697	Cavia_porcellus
MGP_CAROLIEiJ_G0031850	Ppan	98	71.678	ENSCCAG00000032527	-	100	71.674	Cebus_capucinus
MGP_CAROLIEiJ_G0031850	Ppan	92	78.032	ENSCATG00000040554	-	91	78.490	Cercocebus_atys
MGP_CAROLIEiJ_G0031850	Ppan	98	84.165	ENSCLAG00000009362	-	99	83.333	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031850	Ppan	97	75.054	ENSCSAG00000007423	-	97	75.162	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031850	Ppan	92	67.431	ENSCPBG00000005372	-	82	67.188	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031850	Ppan	80	47.804	ENSCING00000005420	ppan	86	46.265	Ciona_intestinalis
MGP_CAROLIEiJ_G0031850	Ppan	92	43.902	ENSCSAVG00000005816	-	95	43.384	Ciona_savignyi
MGP_CAROLIEiJ_G0031850	Ppan	79	76.738	ENSCANG00000036259	-	96	73.134	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031850	Ppan	99	89.126	ENSCGRG00001015990	Ppan	99	89.126	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031850	Ppan	86	88.424	ENSCGRG00000012785	Ppan	99	88.424	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031850	Ppan	85	64.250	ENSCSEG00000021023	ppan	72	64.500	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031850	Ppan	87	61.463	ENSCVAG00000013547	ppan	76	61.463	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031850	Ppan	96	57.265	ENSDARG00000022232	ppan	89	57.265	Danio_rerio
MGP_CAROLIEiJ_G0031850	Ppan	64	90.000	ENSDNOG00000047670	-	68	90.000	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031850	Ppan	73	89.535	ENSDORG00000003829	Ppan	100	89.535	Dipodomys_ordii
MGP_CAROLIEiJ_G0031850	Ppan	84	41.814	FBgn0010770	ppan	81	41.814	Drosophila_melanogaster
MGP_CAROLIEiJ_G0031850	Ppan	97	77.582	ENSETEG00000019286	-	96	77.802	Echinops_telfairi
MGP_CAROLIEiJ_G0031850	Ppan	54	64.286	ENSEBUG00000004335	ppan	61	64.286	Eptatretus_burgeri
MGP_CAROLIEiJ_G0031850	Ppan	97	84.835	ENSEASG00005010574	-	96	84.835	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031850	Ppan	97	84.430	ENSECAG00000024469	-	96	84.430	Equus_caballus
MGP_CAROLIEiJ_G0031850	Ppan	87	58.950	ENSELUG00000024160	ppan	78	60.482	Esox_lucius
MGP_CAROLIEiJ_G0031850	Ppan	96	79.870	ENSFCAG00000009388	-	91	79.870	Felis_catus
MGP_CAROLIEiJ_G0031850	Ppan	79	70.270	ENSFDAG00000008458	-	96	70.946	Fukomys_damarensis
MGP_CAROLIEiJ_G0031850	Ppan	86	61.765	ENSFHEG00000001554	ppan	76	61.765	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031850	Ppan	95	57.871	ENSGMOG00000003431	ppan	86	57.556	Gadus_morhua
MGP_CAROLIEiJ_G0031850	Ppan	88	56.174	ENSGALG00000051597	-	84	64.118	Gallus_gallus
MGP_CAROLIEiJ_G0031850	Ppan	87	61.985	ENSGAFG00000015832	ppan	76	61.985	Gambusia_affinis
MGP_CAROLIEiJ_G0031850	Ppan	93	57.582	ENSGACG00000013723	ppan	86	57.582	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031850	Ppan	97	66.376	ENSGAGG00000009455	-	84	66.376	Gopherus_agassizii
MGP_CAROLIEiJ_G0031850	Ppan	87	74.272	ENSGGOG00000039459	PPAN	98	73.333	Gorilla_gorilla
MGP_CAROLIEiJ_G0031850	Ppan	97	56.092	ENSHBUG00000021830	ppan	90	56.092	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031850	Ppan	96	83.772	ENSHGLG00000006964	-	96	83.772	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031850	Ppan	96	83.772	ENSHGLG00100011618	-	96	83.772	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031850	Ppan	86	51.365	ENSHCOG00000016751	ppan	75	51.790	Hippocampus_comes
MGP_CAROLIEiJ_G0031850	Ppan	87	64.563	ENSIPUG00000005082	ppan	73	64.819	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031850	Ppan	99	81.761	ENSSTOG00000010828	-	100	81.761	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031850	Ppan	97	86.214	ENSJJAG00000016362	Ppan	98	86.652	Jaculus_jaculus
MGP_CAROLIEiJ_G0031850	Ppan	87	61.220	ENSKMAG00000016509	ppan	76	61.220	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031850	Ppan	85	62.907	ENSLBEG00000020897	ppan	94	62.907	Labrus_bergylta
MGP_CAROLIEiJ_G0031850	Ppan	91	56.979	ENSLACG00000001451	ppan	93	56.979	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031850	Ppan	92	56.733	ENSLOCG00000007381	ppan	79	60.096	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031850	Ppan	91	83.568	ENSLAFG00000016399	-	91	84.038	Loxodonta_africana
MGP_CAROLIEiJ_G0031850	Ppan	97	75.546	ENSMFAG00000042854	-	97	75.162	Macaca_fascicularis
MGP_CAROLIEiJ_G0031850	Ppan	89	80.189	ENSMMUG00000017211	PPAN	100	88.660	Macaca_mulatta
MGP_CAROLIEiJ_G0031850	Ppan	92	78.261	ENSMNEG00000031363	-	97	75.054	Macaca_nemestrina
MGP_CAROLIEiJ_G0031850	Ppan	88	80.144	ENSMLEG00000042991	-	97	74.624	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031850	Ppan	87	62.836	ENSMAMG00000012418	ppan	77	62.836	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031850	Ppan	97	55.882	ENSMZEG00005018872	ppan	98	61.153	Maylandia_zebra
MGP_CAROLIEiJ_G0031850	Ppan	99	88.060	ENSMAUG00000000310	Ppan	100	88.060	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031850	Ppan	96	79.425	ENSMICG00000047321	-	95	79.425	Microcebus_murinus
MGP_CAROLIEiJ_G0031850	Ppan	96	91.150	ENSMOCG00000016402	Ppan	97	91.150	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031850	Ppan	93	59.641	ENSMMOG00000011584	ppan	86	59.641	Mola_mola
MGP_CAROLIEiJ_G0031850	Ppan	92	71.005	ENSMODG00000005158	PPAN	92	71.005	Monodelphis_domestica
MGP_CAROLIEiJ_G0031850	Ppan	87	64.865	ENSMALG00000015931	ppan	76	64.865	Monopterus_albus
MGP_CAROLIEiJ_G0031850	Ppan	100	98.298	ENSMUSG00000004100	Ppan	100	98.298	Mus_musculus
MGP_CAROLIEiJ_G0031850	Ppan	100	95.532	MGP_PahariEiJ_G0014716	Ppan	100	95.532	Mus_pahari
MGP_CAROLIEiJ_G0031850	Ppan	100	98.085	MGP_SPRETEiJ_G0032974	Ppan	100	98.085	Mus_spretus
MGP_CAROLIEiJ_G0031850	Ppan	99	84.483	ENSMPUG00000006866	-	98	84.483	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031850	Ppan	98	81.996	ENSMLUG00000014186	-	97	81.996	Myotis_lucifugus
MGP_CAROLIEiJ_G0031850	Ppan	79	79.088	ENSNGAG00000012813	Ppan	100	79.088	Nannospalax_galili
MGP_CAROLIEiJ_G0031850	Ppan	97	56.067	ENSNBRG00000008460	ppan	90	56.067	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031850	Ppan	97	75.325	ENSNLEG00000012048	-	99	74.630	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031850	Ppan	92	69.635	ENSMEUG00000007968	-	96	69.635	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031850	Ppan	89	84.375	ENSOPRG00000006982	-	55	83.645	Ochotona_princeps
MGP_CAROLIEiJ_G0031850	Ppan	99	81.876	ENSODEG00000016743	-	99	81.876	Octodon_degus
MGP_CAROLIEiJ_G0031850	Ppan	87	61.165	ENSONIG00000001598	ppan	90	56.276	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031850	Ppan	89	71.028	ENSOANG00000006740	PPAN	87	71.028	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031850	Ppan	99	57.660	ENSORLG00000005634	ppan	89	57.660	Oryzias_latipes
MGP_CAROLIEiJ_G0031850	Ppan	99	57.660	ENSORLG00020003966	ppan	89	57.660	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031850	Ppan	99	57.447	ENSORLG00015016869	ppan	85	62.130	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031850	Ppan	91	60.373	ENSOMEG00000023943	ppan	82	60.373	Oryzias_melastigma
MGP_CAROLIEiJ_G0031850	Ppan	91	80.607	ENSOGAG00000014454	-	91	80.607	Otolemur_garnettii
MGP_CAROLIEiJ_G0031850	Ppan	83	83.333	ENSOARG00000014981	-	83	83.333	Ovis_aries
MGP_CAROLIEiJ_G0031850	Ppan	97	76.087	ENSPPAG00000039744	-	97	75.484	Pan_paniscus
MGP_CAROLIEiJ_G0031850	Ppan	95	84.753	ENSPPRG00000023895	-	95	84.753	Panthera_pardus
MGP_CAROLIEiJ_G0031850	Ppan	85	83.960	ENSPTIG00000015960	-	95	83.960	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031850	Ppan	97	75.870	ENSPTRG00000010459	PPAN	97	75.269	Pan_troglodytes
MGP_CAROLIEiJ_G0031850	Ppan	92	78.032	ENSPANG00000005948	-	91	78.490	Papio_anubis
MGP_CAROLIEiJ_G0031850	Ppan	89	59.765	ENSPMGG00000001212	ppan	81	59.765	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031850	Ppan	99	89.485	ENSPEMG00000015393	Ppan	99	89.485	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031850	Ppan	96	68.282	ENSPCIG00000018786	-	84	68.282	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031850	Ppan	87	61.259	ENSPFOG00000005396	ppan	76	61.259	Poecilia_formosa
MGP_CAROLIEiJ_G0031850	Ppan	87	61.259	ENSPLAG00000021445	ppan	76	61.259	Poecilia_latipinna
MGP_CAROLIEiJ_G0031850	Ppan	87	61.501	ENSPMEG00000011625	ppan	76	61.501	Poecilia_mexicana
MGP_CAROLIEiJ_G0031850	Ppan	87	61.501	ENSPREG00000006330	ppan	76	61.501	Poecilia_reticulata
MGP_CAROLIEiJ_G0031850	Ppan	91	78.886	ENSPPYG00000009543	-	54	78.886	Pongo_abelii
MGP_CAROLIEiJ_G0031850	Ppan	83	78.005	ENSPCAG00000007303	-	96	78.005	Procavia_capensis
MGP_CAROLIEiJ_G0031850	Ppan	96	79.867	ENSPCOG00000027096	-	95	79.867	Propithecus_coquereli
MGP_CAROLIEiJ_G0031850	Ppan	98	80.736	ENSPVAG00000003673	-	97	80.736	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031850	Ppan	87	60.976	ENSPNYG00000013872	ppan	78	60.976	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031850	Ppan	91	60.648	ENSPNAG00000017058	ppan	78	60.648	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031850	Ppan	99	91.045	ENSRNOG00000020608	Ppan	99	91.045	Rattus_norvegicus
MGP_CAROLIEiJ_G0031850	Ppan	92	78.490	ENSRBIG00000041320	-	97	74.946	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031850	Ppan	81	83.465	ENSRROG00000038245	-	100	83.465	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031850	Ppan	92	78.522	ENSRROG00000034660	-	97	75.162	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031850	Ppan	85	33.693	YDR312W	-	99	34.557	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0031850	Ppan	77	34.360	YHR066W	-	98	34.279	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0031850	Ppan	97	71.888	ENSSBOG00000026246	-	100	71.888	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031850	Ppan	87	65.534	ENSSHAG00000009305	-	99	65.534	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031850	Ppan	96	56.962	ENSSFOG00015023726	ppan	91	56.962	Scleropages_formosus
MGP_CAROLIEiJ_G0031850	Ppan	93	59.375	ENSSMAG00000004098	ppan	80	60.698	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031850	Ppan	87	64.303	ENSSDUG00000021301	ppan	76	64.303	Seriola_dumerili
MGP_CAROLIEiJ_G0031850	Ppan	87	64.059	ENSSLDG00000016106	ppan	77	64.059	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031850	Ppan	97	59.355	ENSSPAG00000000160	ppan	86	59.355	Stegastes_partitus
MGP_CAROLIEiJ_G0031850	Ppan	98	82.863	ENSSSCG00000013662	PPAN	97	82.863	Sus_scrofa
MGP_CAROLIEiJ_G0031850	Ppan	86	62.222	ENSTRUG00000007656	ppan	79	62.222	Takifugu_rubripes
MGP_CAROLIEiJ_G0031850	Ppan	86	64.109	ENSTNIG00000018564	ppan	86	64.109	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031850	Ppan	64	88.017	ENSTBEG00000002721	-	64	88.017	Tupaia_belangeri
MGP_CAROLIEiJ_G0031850	Ppan	99	75.589	ENSTTRG00000004530	-	99	75.589	Tursiops_truncatus
MGP_CAROLIEiJ_G0031850	Ppan	96	84.547	ENSVVUG00000028309	-	98	83.190	Vulpes_vulpes
MGP_CAROLIEiJ_G0031850	Ppan	92	61.327	ENSXETG00000022055	ppan	80	61.327	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031850	Ppan	87	61.501	ENSXMAG00000028708	ppan	76	61.501	Xiphophorus_maculatus