EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031860 (Gene tree)
Gene ID: 110302482
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 16867 bases
Position: chr9:17076577-17093443
Accession: 110302482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0086923	RRM_1	PF00076.22	4.4e-28	1	2
MGP_CAROLIEiJ_P0086923	RRM_1	PF00076.22	4.4e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0086923	-	3439	XM_021173276	MGP_CAROLIEiJ_P0086923	748 (aa)	XP_021028935	UPI000A315D61

Gene Model

Click here to download MGP_CAROLIEiJ_G0031860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031860's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0031860	-	66	44.902	MGP_CAROLIEiJ_G0026202	Raver2	76	54.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031860	-	100	88.102	ENSG00000161847	RAVER1	100	87.567	Homo_sapiens
MGP_CAROLIEiJ_G0031860	-	100	87.032	ENSAMEG00000011738	RAVER1	98	87.032	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031860	-	78	63.636	ENSAPEG00000010854	raver1	84	63.636	Amphiprion_percula
MGP_CAROLIEiJ_G0031860	-	97	50.134	ENSATEG00000021004	raver1	93	48.859	Anabas_testudineus
MGP_CAROLIEiJ_G0031860	-	84	59.077	ENSACAG00000008386	-	94	58.480	Anolis_carolinensis
MGP_CAROLIEiJ_G0031860	-	100	87.166	ENSANAG00000028226	RAVER1	98	87.299	Aotus_nancymaae
MGP_CAROLIEiJ_G0031860	-	78	65.823	ENSACLG00000018492	raver1	76	58.586	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031860	-	77	80.000	ENSAMXG00000005132	raver1	81	75.000	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031860	-	100	86.364	ENSBTAG00000015721	RAVER1	97	92.987	Bos_taurus
MGP_CAROLIEiJ_G0031860	-	100	87.299	ENSCJAG00000005671	RAVER1	98	87.433	Callithrix_jacchus
MGP_CAROLIEiJ_G0031860	-	100	86.364	ENSCAFG00000017861	RAVER1	98	86.765	Canis_familiaris
MGP_CAROLIEiJ_G0031860	-	100	86.364	ENSCAFG00020024449	RAVER1	100	86.765	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031860	-	100	86.096	ENSCHIG00000006718	RAVER1	100	86.364	Capra_hircus
MGP_CAROLIEiJ_G0031860	-	91	82.602	ENSTSYG00000027107	RAVER1	100	82.310	Carlito_syrichta
MGP_CAROLIEiJ_G0031860	-	90	85.481	ENSCAPG00000002269	RAVER1	100	86.815	Cavia_aperea
MGP_CAROLIEiJ_G0031860	-	100	87.299	ENSCPOG00000001008	RAVER1	100	88.636	Cavia_porcellus
MGP_CAROLIEiJ_G0031860	-	100	87.567	ENSCCAG00000031723	RAVER1	98	87.032	Cebus_capucinus
MGP_CAROLIEiJ_G0031860	-	100	88.770	ENSCATG00000043863	RAVER1	98	88.235	Cercocebus_atys
MGP_CAROLIEiJ_G0031860	-	100	88.652	ENSCLAG00000009336	RAVER1	100	88.919	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031860	-	100	88.904	ENSCSAG00000007317	RAVER1	84	88.369	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031860	-	96	62.131	ENSCPBG00000005349	-	96	60.797	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031860	-	100	88.770	ENSCANG00000008337	RAVER1	98	88.235	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031860	-	100	95.989	ENSCGRG00001013260	-	100	95.989	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031860	-	100	95.989	ENSCGRG00000015138	-	100	95.989	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031860	-	72	80.769	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031860	-	98	49.800	ENSCVAG00000013971	raver1	83	61.616	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031860	-	100	80.523	ENSDORG00000010106	-	100	79.477	Dipodomys_ordii
MGP_CAROLIEiJ_G0031860	-	67	73.171	ENSETEG00000008201	-	74	88.325	Echinops_telfairi
MGP_CAROLIEiJ_G0031860	-	66	91.443	ENSEASG00005010544	-	93	87.472	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031860	-	100	89.572	ENSECAG00000024966	RAVER1	98	89.572	Equus_caballus
MGP_CAROLIEiJ_G0031860	-	98	51.409	ENSELUG00000023287	raver1	93	51.286	Esox_lucius
MGP_CAROLIEiJ_G0031860	-	100	88.636	ENSFCAG00000009435	RAVER1	98	88.636	Felis_catus
MGP_CAROLIEiJ_G0031860	-	100	87.183	ENSFDAG00000015113	RAVER1	100	87.850	Fukomys_damarensis
MGP_CAROLIEiJ_G0031860	-	81	59.794	ENSGMOG00000003649	raver1	83	59.794	Gadus_morhua
MGP_CAROLIEiJ_G0031860	-	66	44.752	ENSGALG00000050608	-	52	44.334	Gallus_gallus
MGP_CAROLIEiJ_G0031860	-	96	62.384	ENSGAGG00000011748	-	95	75.967	Gopherus_agassizii
MGP_CAROLIEiJ_G0031860	-	100	87.834	ENSGGOG00000006015	RAVER1	98	87.299	Gorilla_gorilla
MGP_CAROLIEiJ_G0031860	-	68	57.782	ENSHBUG00000021210	raver1	70	57.227	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031860	-	100	87.450	ENSHGLG00000015460	RAVER1	100	87.717	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031860	-	100	87.450	ENSHGLG00100000812	RAVER1	100	87.717	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031860	-	98	49.933	ENSHCOG00000000449	raver1	91	49.665	Hippocampus_comes
MGP_CAROLIEiJ_G0031860	-	96	51.586	ENSIPUG00000013153	raver1	81	59.804	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031860	-	100	89.439	ENSSTOG00000003241	RAVER1	100	88.904	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031860	-	100	90.120	ENSJJAG00000018219	-	100	89.987	Jaculus_jaculus
MGP_CAROLIEiJ_G0031860	-	97	49.867	ENSKMAG00000017355	raver1	92	47.730	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031860	-	89	49.337	ENSLBEG00000008268	raver1	70	55.877	Labrus_bergylta
MGP_CAROLIEiJ_G0031860	-	90	60.342	ENSLACG00000005809	-	99	60.913	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031860	-	96	55.968	ENSLOCG00000007500	raver1	92	54.570	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031860	-	100	87.850	ENSLAFG00000003664	-	100	88.117	Loxodonta_africana
MGP_CAROLIEiJ_G0031860	-	100	88.369	ENSMFAG00000037977	RAVER1	98	87.834	Macaca_fascicularis
MGP_CAROLIEiJ_G0031860	-	100	88.636	ENSMMUG00000014897	RAVER1	98	88.102	Macaca_mulatta
MGP_CAROLIEiJ_G0031860	-	100	88.636	ENSMNEG00000028390	RAVER1	98	88.102	Macaca_nemestrina
MGP_CAROLIEiJ_G0031860	-	100	88.636	ENSMLEG00000041959	RAVER1	98	88.102	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031860	-	75	79.245	ENSMAMG00000012059	raver1	58	79.245	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031860	-	74	87.500	ENSMZEG00005019002	raver1	77	87.500	Maylandia_zebra
MGP_CAROLIEiJ_G0031860	-	100	94.920	ENSMAUG00000017948	-	100	94.786	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031860	-	99	86.479	ENSMICG00000010326	RAVER1	99	86.479	Microcebus_murinus
MGP_CAROLIEiJ_G0031860	-	100	95.321	ENSMOCG00000015553	-	100	95.321	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031860	-	99	50.333	ENSMMOG00000012093	raver1	81	60.000	Mola_mola
MGP_CAROLIEiJ_G0031860	-	97	74.110	ENSMODG00000005584	-	89	73.699	Monodelphis_domestica
MGP_CAROLIEiJ_G0031860	-	100	99.198	ENSMUSG00000010205	Raver1	100	99.198	Mus_musculus
MGP_CAROLIEiJ_G0031860	-	100	97.606	MGP_PahariEiJ_G0014726	-	100	97.606	Mus_pahari
MGP_CAROLIEiJ_G0031860	-	100	99.064	MGP_SPRETEiJ_G0032984	-	100	99.064	Mus_spretus
MGP_CAROLIEiJ_G0031860	-	100	88.369	ENSMPUG00000006712	RAVER1	98	88.369	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031860	-	100	85.294	ENSMLUG00000012328	RAVER1	100	85.695	Myotis_lucifugus
MGP_CAROLIEiJ_G0031860	-	100	90.254	ENSNGAG00000001260	-	100	90.254	Nannospalax_galili
MGP_CAROLIEiJ_G0031860	-	78	66.250	ENSNBRG00000010139	raver1	79	59.596	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031860	-	100	87.834	ENSNLEG00000012181	RAVER1	98	87.299	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031860	-	90	73.314	ENSMEUG00000003281	-	100	71.994	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031860	-	50	85.156	ENSOPRG00000005855	-	51	85.156	Ochotona_princeps
MGP_CAROLIEiJ_G0031860	-	100	87.717	ENSODEG00000016260	RAVER1	100	87.984	Octodon_degus
MGP_CAROLIEiJ_G0031860	-	78	65.000	ENSONIG00000001559	raver1	100	50.536	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031860	-	100	81.283	ENSOCUG00000020918	RAVER1	98	81.818	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031860	-	70	61.609	ENSORLG00000005458	raver1	71	60.920	Oryzias_latipes
MGP_CAROLIEiJ_G0031860	-	70	61.616	ENSORLG00020004392	raver1	71	61.616	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031860	-	66	64.925	ENSORLG00015017222	raver1	67	64.179	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031860	-	75	83.673	ENSOMEG00000023956	raver1	71	83.673	Oryzias_melastigma
MGP_CAROLIEiJ_G0031860	-	100	86.898	ENSOGAG00000011071	RAVER1	98	86.497	Otolemur_garnettii
MGP_CAROLIEiJ_G0031860	-	100	84.358	ENSOARG00000015886	RAVER1	98	84.358	Ovis_aries
MGP_CAROLIEiJ_G0031860	-	100	88.102	ENSPPAG00000002611	RAVER1	98	87.567	Pan_paniscus
MGP_CAROLIEiJ_G0031860	-	100	89.037	ENSPPRG00000009912	RAVER1	98	89.037	Panthera_pardus
MGP_CAROLIEiJ_G0031860	-	100	88.102	ENSPTRG00000010466	RAVER1	98	87.567	Pan_troglodytes
MGP_CAROLIEiJ_G0031860	-	100	88.636	ENSPANG00000004122	RAVER1	98	88.102	Papio_anubis
MGP_CAROLIEiJ_G0031860	-	100	95.194	ENSPEMG00000016411	-	100	95.327	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031860	-	100	75.497	ENSPCIG00000018695	-	99	78.947	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031860	-	63	66.845	ENSPLAG00000020793	raver1	83	55.046	Poecilia_latipinna
MGP_CAROLIEiJ_G0031860	-	100	51.184	ENSPMEG00000011220	raver1	94	49.804	Poecilia_mexicana
MGP_CAROLIEiJ_G0031860	-	74	90.698	ENSPREG00000006864	raver1	78	90.698	Poecilia_reticulata
MGP_CAROLIEiJ_G0031860	-	100	87.433	ENSPPYG00000010514	RAVER1	84	87.032	Pongo_abelii
MGP_CAROLIEiJ_G0031860	-	100	87.867	ENSPCOG00000026605	RAVER1	98	88.133	Propithecus_coquereli
MGP_CAROLIEiJ_G0031860	-	100	87.166	ENSPVAG00000003689	RAVER1	100	87.299	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031860	-	64	84.314	ENSPNYG00000013284	raver1	66	84.314	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031860	-	98	51.673	ENSPNAG00000015476	raver1	92	51.135	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031860	-	100	96.390	ENSRNOG00000020710	Raver1	100	96.390	Rattus_norvegicus
MGP_CAROLIEiJ_G0031860	-	100	87.968	ENSRBIG00000034702	RAVER1	98	88.102	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031860	-	100	86.364	ENSRROG00000031186	RAVER1	98	85.695	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031860	-	100	85.027	ENSSBOG00000023423	RAVER1	98	84.358	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031860	-	90	74.231	ENSSHAG00000008181	-	90	73.353	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031860	-	98	50.660	ENSSDUG00000021063	raver1	87	54.463	Seriola_dumerili
MGP_CAROLIEiJ_G0031860	-	80	61.905	ENSSLDG00000014505	raver1	83	56.757	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031860	-	79	63.095	ENSSPAG00000000688	raver1	84	58.559	Stegastes_partitus
MGP_CAROLIEiJ_G0031860	-	100	88.904	ENSSSCG00000013650	-	98	89.171	Sus_scrofa
MGP_CAROLIEiJ_G0031860	-	98	50.201	ENSTRUG00000025641	raver1	79	60.000	Takifugu_rubripes
MGP_CAROLIEiJ_G0031860	-	100	87.433	ENSTTRG00000009552	RAVER1	100	87.968	Tursiops_truncatus
MGP_CAROLIEiJ_G0031860	-	100	88.770	ENSUAMG00000020385	RAVER1	98	88.770	Ursus_americanus
MGP_CAROLIEiJ_G0031860	-	100	86.364	ENSVVUG00000028976	RAVER1	98	86.765	Vulpes_vulpes
MGP_CAROLIEiJ_G0031860	-	100	55.105	ENSXETG00000011622	raver1	94	62.500	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031860	-	99	51.061	ENSXCOG00000016368	raver1	80	61.616	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031860	-	99	51.061	ENSXMAG00000000217	raver1	80	61.616	Xiphophorus_maculatus