EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031894 (Gene tree)
Gene ID: 110301671
Gene Symbol: Elavl3
Alias: 2600009P04Rik|Huc|mHuC
Full Name: ELAV like RNA binding protein 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 37406 bases
Position: chr9:18019695-18057100
Accession: 110301671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0087014	RRM_5	PF13893.6	4e-13	1	2
MGP_CAROLIEiJ_P0087014	RRM_5	PF13893.6	4e-13	2	2
MGP_CAROLIEiJ_P0087014	RRM_1	PF00076.22	5.2e-64	1	3
MGP_CAROLIEiJ_P0087014	RRM_1	PF00076.22	5.2e-64	2	3
MGP_CAROLIEiJ_P0087014	RRM_1	PF00076.22	5.2e-64	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0087013	-	4551	-	MGP_CAROLIEiJ_P0087013	352 (aa)	-	UPI00001F70E4
MGP_CAROLIEiJ_T0087014	-	5012	-	MGP_CAROLIEiJ_P0087014	367 (aa)	XP_021027899	UPI0000002388

Gene Model

Click here to download MGP_CAROLIEiJ_G0031894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0031894	Elavl3	93	36.145	MGP_CAROLIEiJ_G0019740	Pabpc1	54	36.145
MGP_CAROLIEiJ_G0031894	Elavl3	84	41.975	MGP_CAROLIEiJ_G0032305	Celf6	57	42.308
MGP_CAROLIEiJ_G0031894	Elavl3	91	37.179	MGP_CAROLIEiJ_G0028595	Tia1	98	31.169
MGP_CAROLIEiJ_G0031894	Elavl3	93	33.735	MGP_CAROLIEiJ_G0026435	-	92	31.061
MGP_CAROLIEiJ_G0031894	Elavl3	65	38.333	MGP_CAROLIEiJ_G0032783	Rbms3	80	37.097
MGP_CAROLIEiJ_G0031894	Elavl3	65	36.207	MGP_CAROLIEiJ_G0023586	Rbms1	51	33.645
MGP_CAROLIEiJ_G0031894	Elavl3	78	38.272	MGP_CAROLIEiJ_G0015643	-	91	31.765
MGP_CAROLIEiJ_G0031894	Elavl3	91	34.940	MGP_CAROLIEiJ_G0022217	Pabpc2	61	34.940
MGP_CAROLIEiJ_G0031894	Elavl3	90	35.632	MGP_CAROLIEiJ_G0025314	Celf3	98	35.632
MGP_CAROLIEiJ_G0031894	Elavl3	91	37.179	MGP_CAROLIEiJ_G0030548	Tial1	79	37.179
MGP_CAROLIEiJ_G0031894	Elavl3	92	68.308	MGP_CAROLIEiJ_G0030798	Elavl1	95	67.692
MGP_CAROLIEiJ_G0031894	Elavl3	72	33.708	MGP_CAROLIEiJ_G0033098	Rbmx	86	33.708
MGP_CAROLIEiJ_G0031894	Elavl3	74	42.391	MGP_CAROLIEiJ_G0023949	Celf1	57	43.590
MGP_CAROLIEiJ_G0031894	Elavl3	100	82.271	MGP_CAROLIEiJ_G0026289	Elavl4	98	81.994
MGP_CAROLIEiJ_G0031894	Elavl3	76	40.741	MGP_CAROLIEiJ_G0023161	Celf2	82	34.667
MGP_CAROLIEiJ_G0031894	Elavl3	90	36.145	MGP_CAROLIEiJ_G0024968	Pabpc4l	98	36.145
MGP_CAROLIEiJ_G0031894	Elavl3	93	37.349	MGP_CAROLIEiJ_G0021058	Pabpc6	61	37.349
MGP_CAROLIEiJ_G0031894	Elavl3	73	39.506	MGP_CAROLIEiJ_G0022058	Celf4	67	39.744
MGP_CAROLIEiJ_G0031894	Elavl3	100	81.111	MGP_CAROLIEiJ_G0026159	Elavl2	100	80.332
MGP_CAROLIEiJ_G0031894	Elavl3	65	37.500	MGP_CAROLIEiJ_G0015568	Cirbp	79	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSG00000196361	ELAVL3	100	99.455	Homo_sapiens
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSAPOG00000017565	elavl3	98	86.080	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031894	Elavl3	100	96.023	ENSAMEG00000010487	ELAVL3	100	95.355	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSACIG00000024190	elavl3	98	86.080	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSAOCG00000005054	elavl3	98	89.205	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSAPEG00000011145	elavl3	98	89.205	Amphiprion_percula
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSATEG00000020941	elavl3	99	86.080	Anabas_testudineus
MGP_CAROLIEiJ_G0031894	Elavl3	99	88.515	ENSACAG00000016958	ELAVL3	93	88.398	Anolis_carolinensis
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.432	ENSANAG00000030798	ELAVL3	98	99.432	Aotus_nancymaae
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSACLG00000018260	elavl3	98	86.080	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	ENSAMXG00000040498	elavl3	100	87.466	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031894	Elavl3	100	98.864	ENSBTAG00000014412	ELAVL3	100	97.003	Bos_taurus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSCJAG00000005589	ELAVL3	100	99.455	Callithrix_jacchus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSCAFG00000017350	ELAVL3	100	99.183	Canis_familiaris
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.148	ENSCAFG00020004614	ELAVL3	100	97.019	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031894	Elavl3	99	98.901	ENSCHIG00000003436	ELAVL3	100	98.901	Capra_hircus
MGP_CAROLIEiJ_G0031894	Elavl3	99	98.907	ENSTSYG00000036621	ELAVL3	100	98.907	Carlito_syrichta
MGP_CAROLIEiJ_G0031894	Elavl3	89	82.716	ENSCAPG00000017620	ELAVL3	99	82.716	Cavia_aperea
MGP_CAROLIEiJ_G0031894	Elavl3	89	82.716	ENSCPOG00000001793	ELAVL3	99	82.716	Cavia_porcellus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSCCAG00000034350	ELAVL3	100	99.455	Cebus_capucinus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSCATG00000044086	ELAVL3	100	99.455	Cercocebus_atys
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSCLAG00000016404	ELAVL3	100	99.183	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031894	Elavl3	90	99.130	ENSCSAG00000006755	ELAVL3	100	99.130	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031894	Elavl3	100	89.235	ENSCPBG00000023982	ELAVL3	98	88.102	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSCANG00000038728	ELAVL3	100	99.455	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031894	Elavl3	100	100.000	ENSCGRG00001018927	Elavl3	100	100.000	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.728	ENSCGRG00000007158	Elavl3	100	99.728	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031894	Elavl3	100	86.932	ENSCSEG00000021095	elavl3	98	85.795	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSCVAG00000014060	elavl3	98	89.205	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.625	ENSDARG00000014420	elavl3	98	89.489	Danio_rerio
MGP_CAROLIEiJ_G0031894	Elavl3	99	98.626	ENSDORG00000002538	Elavl3	100	98.626	Dipodomys_ordii
MGP_CAROLIEiJ_G0031894	Elavl3	51	99.237	ENSETEG00000000164	-	57	99.237	Echinops_telfairi
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSEASG00005004561	ELAVL3	100	99.183	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.148	ENSECAG00000020594	ELAVL3	100	98.370	Equus_caballus
MGP_CAROLIEiJ_G0031894	Elavl3	100	88.068	ENSELUG00000023043	elavl3	100	85.014	Esox_lucius
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSFCAG00000024763	ELAVL3	100	99.183	Felis_catus
MGP_CAROLIEiJ_G0031894	Elavl3	100	89.205	ENSFDAG00000008449	ELAVL3	100	87.738	Fukomys_damarensis
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSFHEG00000001675	elavl3	98	86.080	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.625	ENSGMOG00000003760	elavl3	98	89.489	Gadus_morhua
MGP_CAROLIEiJ_G0031894	Elavl3	63	74.803	ENSGALG00000047364	-	100	74.803	Gallus_gallus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSGAFG00000016015	elavl3	97	89.205	Gambusia_affinis
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSGACG00000013839	elavl3	98	89.205	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031894	Elavl3	97	90.164	ENSGAGG00000016141	ELAVL3	100	90.164	Gopherus_agassizii
MGP_CAROLIEiJ_G0031894	Elavl3	99	99.451	ENSGGOG00000008635	ELAVL3	100	99.451	Gorilla_gorilla
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.500	ENSHBUG00000020978	elavl3	100	84.469	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031894	Elavl3	86	70.764	ENSHGLG00000019379	-	97	70.764	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSHGLG00000015199	ELAVL3	100	99.455	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031894	Elavl3	98	96.188	ENSHGLG00100011200	ELAVL3	100	98.281	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.625	ENSHCOG00000015894	elavl3	100	87.466	Hippocampus_comes
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSIPUG00000013002	elavl3	97	86.080	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSSTOG00000021111	ELAVL3	100	99.455	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031894	Elavl3	99	98.626	ENSJJAG00000023513	Elavl3	100	98.626	Jaculus_jaculus
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSKMAG00000017412	elavl3	98	86.080	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSLBEG00000008073	elavl3	97	86.080	Labrus_bergylta
MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	ENSLOCG00000007647	elavl3	100	87.466	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031894	Elavl3	99	98.365	ENSLAFG00000005013	ELAVL3	99	98.365	Loxodonta_africana
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSMFAG00000003692	ELAVL3	100	99.455	Macaca_fascicularis
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSMMUG00000020616	ELAVL3	100	99.455	Macaca_mulatta
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSMNEG00000043973	ELAVL3	100	99.183	Macaca_nemestrina
MGP_CAROLIEiJ_G0031894	Elavl3	90	92.050	ENSMLEG00000013976	ELAVL3	99	92.213	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSMAMG00000011697	elavl3	99	86.080	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSMZEG00005019053	elavl3	98	89.205	Maylandia_zebra
MGP_CAROLIEiJ_G0031894	Elavl3	99	100.000	ENSMAUG00000016478	Elavl3	100	100.000	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031894	Elavl3	100	98.913	ENSMICG00000016528	ELAVL3	100	99.451	Microcebus_murinus
MGP_CAROLIEiJ_G0031894	Elavl3	100	100.000	ENSMOCG00000002046	Elavl3	100	100.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSMMOG00000012154	elavl3	97	86.080	Mola_mola
MGP_CAROLIEiJ_G0031894	Elavl3	100	92.330	ENSMODG00000006653	ELAVL3	91	92.330	Monodelphis_domestica
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSMALG00000016659	elavl3	98	89.205	Monopterus_albus
MGP_CAROLIEiJ_G0031894	Elavl3	100	100.000	ENSMUSG00000003410	Elavl3	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.728	MGP_PahariEiJ_G0014760	Elavl3	100	99.728	Mus_pahari
MGP_CAROLIEiJ_G0031894	Elavl3	100	98.910	ENSMPUG00000005040	ELAVL3	100	98.910	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031894	Elavl3	99	98.093	ENSMLUG00000016320	ELAVL3	99	98.093	Myotis_lucifugus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSNGAG00000000968	Elavl3	100	99.455	Nannospalax_galili
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSNBRG00000010319	elavl3	98	89.205	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031894	Elavl3	99	93.956	ENSMEUG00000016706	ELAVL3	100	93.956	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031894	Elavl3	93	97.934	ENSOPRG00000007373	ELAVL3	100	97.976	Ochotona_princeps
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSODEG00000015790	ELAVL3	100	99.455	Octodon_degus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSONIG00000001538	elavl3	97	89.205	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031894	Elavl3	88	91.700	ENSOANG00000015046	ELAVL3	98	90.119	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSORLG00000005379	elavl3	98	89.205	Oryzias_latipes
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSORLG00020004570	elavl3	98	89.205	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSORLG00015000662	elavl3	98	89.205	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSOMEG00000023959	elavl3	98	86.080	Oryzias_melastigma
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSOGAG00000007072	ELAVL3	100	99.455	Otolemur_garnettii
MGP_CAROLIEiJ_G0031894	Elavl3	100	98.910	ENSOARG00000018464	ELAVL3	100	98.910	Ovis_aries
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSPPAG00000033972	ELAVL3	100	99.455	Pan_paniscus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSPPRG00000005151	ELAVL3	100	99.183	Panthera_pardus
MGP_CAROLIEiJ_G0031894	Elavl3	98	94.595	ENSPTIG00000013610	ELAVL3	97	95.058	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSPTRG00000010506	ELAVL3	100	99.455	Pan_troglodytes
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSPANG00000005849	ELAVL3	100	99.455	Papio_anubis
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.625	ENSPKIG00000016207	elavl3	98	89.489	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSPMGG00000002016	elavl3	98	86.080	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031894	Elavl3	100	85.676	ENSPFOG00000007754	elavl3	100	84.595	Poecilia_formosa
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSPLAG00000001547	elavl3	99	86.080	Poecilia_latipinna
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSPMEG00000010156	elavl3	99	86.080	Poecilia_mexicana
MGP_CAROLIEiJ_G0031894	Elavl3	100	90.341	ENSPREG00000006971	elavl3	98	89.205	Poecilia_reticulata
MGP_CAROLIEiJ_G0031894	Elavl3	84	85.714	ENSPPYG00000009583	-	98	85.714	Pongo_abelii
MGP_CAROLIEiJ_G0031894	Elavl3	84	100.000	ENSPCAG00000015952	ELAVL3	65	100.000	Procavia_capensis
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSPCOG00000023781	ELAVL3	100	99.455	Propithecus_coquereli
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSPVAG00000014893	ELAVL3	100	99.183	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSPNYG00000013186	elavl3	96	86.080	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	ENSPNAG00000003633	elavl3	100	87.466	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031894	Elavl3	100	100.000	ENSRNOG00000013752	Elavl3	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.455	ENSRBIG00000034762	ELAVL3	100	99.455	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031894	Elavl3	91	94.000	ENSRROG00000034305	ELAVL3	100	100.000	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031894	Elavl3	99	99.451	ENSSBOG00000030047	ELAVL3	100	99.451	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031894	Elavl3	90	94.348	ENSSHAG00000005583	ELAVL3	100	94.348	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031894	Elavl3	94	90.361	ENSSFOG00015023630	elavl3	98	89.157	Scleropages_formosus
MGP_CAROLIEiJ_G0031894	Elavl3	100	86.932	ENSSMAG00000004671	elavl3	99	85.795	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSSDUG00000020708	elavl3	98	86.080	Seriola_dumerili
MGP_CAROLIEiJ_G0031894	Elavl3	100	88.579	ENSSLDG00000013769	elavl3	100	87.193	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031894	Elavl3	99	89.041	ENSSARG00000005949	ELAVL3	100	89.041	Sorex_araneus
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSSPAG00000000990	elavl3	98	86.080	Stegastes_partitus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.183	ENSSSCG00000013617	ELAVL3	100	99.183	Sus_scrofa
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSTRUG00000010719	elavl3	99	86.080	Takifugu_rubripes
MGP_CAROLIEiJ_G0031894	Elavl3	100	89.577	ENSTNIG00000018572	elavl3	98	88.451	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031894	Elavl3	97	94.190	ENSTBEG00000006133	ELAVL3	100	94.190	Tupaia_belangeri
MGP_CAROLIEiJ_G0031894	Elavl3	100	98.910	ENSTTRG00000001789	ELAVL3	100	98.910	Tursiops_truncatus
MGP_CAROLIEiJ_G0031894	Elavl3	100	96.023	ENSUAMG00000000405	ELAVL3	98	95.604	Ursus_americanus
MGP_CAROLIEiJ_G0031894	Elavl3	98	94.218	ENSUMAG00000019546	ELAVL3	88	94.137	Ursus_maritimus
MGP_CAROLIEiJ_G0031894	Elavl3	100	99.148	ENSVVUG00000023733	ELAVL3	100	97.275	Vulpes_vulpes
MGP_CAROLIEiJ_G0031894	Elavl3	100	86.188	ENSXETG00000016741	elavl3	99	85.559	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031894	Elavl3	100	87.216	ENSXMAG00000018287	elavl3	98	86.080	Xiphophorus_maculatus