EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031951 (Gene tree)
Gene ID: 110301121
Gene Symbol: Srpr
Alias: 1300011P19Rik|D11Mgi27
Full Name: SRP receptor subunit alpha
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 47447 bases
Position: chr9:30840109-30887555
Accession: 110301121
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0087194	SRP54	PF00448.22	2.5e-47	1	1
MGP_CAROLIEiJ_P0087196	SRP54	PF00448.22	1.1e-19	1	1
MGP_CAROLIEiJ_P0087194	SRP54_N	PF02881.19	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0087195	-	479	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0087194	-	2988	XM_021171372	MGP_CAROLIEiJ_P0087194	636 (aa)	XP_021027031	UPI000A318717
MGP_CAROLIEiJ_T0087196	-	630	-	MGP_CAROLIEiJ_P0087196	153 (aa)	-	-
MGP_CAROLIEiJ_T0087181	-	758	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0031951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSG00000182934	SRPRA	100	97.179	Homo_sapiens
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSAPOG00000017588	srpra	100	68.502	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031951	Srpr	100	96.082	ENSAMEG00000000117	SRPRA	100	96.082	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031951	Srpr	88	88.148	ENSACIG00000021588	srpra	100	65.658	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSAOCG00000018884	srpra	100	68.654	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSAPEG00000022286	srpra	100	66.144	Amphiprion_percula
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSATEG00000023578	srpra	94	86.280	Anabas_testudineus
MGP_CAROLIEiJ_G0031951	Srpr	86	94.697	ENSAPLG00000016079	SRPRA	100	79.112	Anas_platyrhynchos
MGP_CAROLIEiJ_G0031951	Srpr	86	93.939	ENSACAG00000000108	SRPRA	100	77.077	Anolis_carolinensis
MGP_CAROLIEiJ_G0031951	Srpr	100	96.552	ENSANAG00000020346	SRPRA	100	96.552	Aotus_nancymaae
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSACLG00000000518	srpra	100	68.293	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSAMXG00000009975	srpra	100	64.688	Astyanax_mexicanus
MGP_CAROLIEiJ_G0031951	Srpr	100	96.401	ENSBTAG00000014105	SRPRA	100	96.401	Bos_taurus
MGP_CAROLIEiJ_G0031951	Srpr	86	72.180	WBGene00009521	F38A1.8	99	48.392	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0031951	Srpr	100	96.708	ENSCJAG00000008752	SRPRA	100	96.708	Callithrix_jacchus
MGP_CAROLIEiJ_G0031951	Srpr	100	93.260	ENSCAFG00000010474	SRPRA	100	93.260	Canis_familiaris
MGP_CAROLIEiJ_G0031951	Srpr	100	95.298	ENSCAFG00020010608	SRPRA	100	95.298	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031951	Srpr	100	95.462	ENSCHIG00000012423	SRPRA	100	94.523	Capra_hircus
MGP_CAROLIEiJ_G0031951	Srpr	86	97.727	ENSTSYG00000005187	SRPRA	100	98.045	Carlito_syrichta
MGP_CAROLIEiJ_G0031951	Srpr	86	98.485	ENSCAPG00000007098	SRPRA	91	97.744	Cavia_aperea
MGP_CAROLIEiJ_G0031951	Srpr	100	96.860	ENSCPOG00000014976	SRPRA	100	96.860	Cavia_porcellus
MGP_CAROLIEiJ_G0031951	Srpr	100	96.552	ENSCCAG00000025602	SRPRA	100	96.552	Cebus_capucinus
MGP_CAROLIEiJ_G0031951	Srpr	100	97.335	ENSCATG00000039354	SRPRA	100	97.335	Cercocebus_atys
MGP_CAROLIEiJ_G0031951	Srpr	100	97.331	ENSCLAG00000016839	SRPRA	100	97.331	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031951	Srpr	100	97.022	ENSCSAG00000002271	SRPRA	100	97.022	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031951	Srpr	86	96.970	ENSCHOG00000010015	-	73	97.959	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031951	Srpr	86	95.455	ENSCPBG00000011128	SRPRA	100	78.495	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031951	Srpr	86	81.061	ENSCING00000008954	-	100	58.563	Ciona_intestinalis
MGP_CAROLIEiJ_G0031951	Srpr	86	80.303	ENSCSAVG00000005602	-	100	58.769	Ciona_savignyi
MGP_CAROLIEiJ_G0031951	Srpr	100	96.082	ENSCANG00000032337	SRPRA	100	96.082	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031951	Srpr	100	98.742	ENSCGRG00001017670	Srpr	100	98.742	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031951	Srpr	100	98.742	ENSCGRG00000009892	Srpr	100	98.742	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSCSEG00000002374	srpra	100	68.134	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSCVAG00000019881	srpra	100	68.845	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSDARG00000061124	srpra	100	66.364	Danio_rerio
MGP_CAROLIEiJ_G0031951	Srpr	100	94.419	ENSDNOG00000010821	SRPRA	100	93.488	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031951	Srpr	100	97.017	ENSDORG00000016719	Srpr	100	97.017	Dipodomys_ordii
MGP_CAROLIEiJ_G0031951	Srpr	86	78.030	FBgn0010391	Gtp-bp	100	51.005	Drosophila_melanogaster
MGP_CAROLIEiJ_G0031951	Srpr	100	92.200	ENSETEG00000013956	SRPRA	100	90.952	Echinops_telfairi
MGP_CAROLIEiJ_G0031951	Srpr	86	84.848	ENSEBUG00000002602	srpra	89	69.479	Eptatretus_burgeri
MGP_CAROLIEiJ_G0031951	Srpr	100	95.149	ENSEASG00005022980	SRPRA	100	93.740	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.305	ENSECAG00000014692	SRPRA	100	93.897	Equus_caballus
MGP_CAROLIEiJ_G0031951	Srpr	100	86.449	ENSEEUG00000007920	SRPRA	100	85.670	Erinaceus_europaeus
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSELUG00000017643	srpra	100	68.300	Esox_lucius
MGP_CAROLIEiJ_G0031951	Srpr	80	94.325	ENSFCAG00000030894	-	99	93.933	Felis_catus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.775	ENSFCAG00000011274	-	100	95.462	Felis_catus
MGP_CAROLIEiJ_G0031951	Srpr	86	94.697	ENSFALG00000005048	SRPRA	99	74.531	Ficedula_albicollis
MGP_CAROLIEiJ_G0031951	Srpr	100	97.488	ENSFDAG00000016229	SRPRA	100	97.488	Fukomys_damarensis
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSFHEG00000016959	srpra	100	67.523	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSGMOG00000013244	srpra	100	68.896	Gadus_morhua
MGP_CAROLIEiJ_G0031951	Srpr	86	94.697	ENSGALG00000030759	SRPRA	100	79.167	Gallus_gallus
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSGAFG00000000453	srpra	100	68.092	Gambusia_affinis
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSGACG00000006550	srpra	100	66.977	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031951	Srpr	86	94.697	ENSGAGG00000021157	SRPRA	100	79.263	Gopherus_agassizii
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSGGOG00000012962	SRPRA	100	97.179	Gorilla_gorilla
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSHBUG00000000119	srpra	100	68.140	Haplochromis_burtoni
MGP_CAROLIEiJ_G0031951	Srpr	100	96.703	ENSHGLG00000001597	SRPR	100	96.703	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031951	Srpr	100	96.703	ENSHGLG00100006449	SRPR	100	96.703	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031951	Srpr	86	91.667	ENSHCOG00000010749	srpra	100	67.761	Hippocampus_comes
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSIPUG00000000867	srpra	99	64.390	Ictalurus_punctatus
MGP_CAROLIEiJ_G0031951	Srpr	100	97.492	ENSSTOG00000009897	SRPRA	100	97.492	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031951	Srpr	100	97.488	ENSJJAG00000020272	Srpr	100	97.488	Jaculus_jaculus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.909	ENSKMAG00000002280	srpra	100	68.580	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSLBEG00000009608	srpra	100	67.424	Labrus_bergylta
MGP_CAROLIEiJ_G0031951	Srpr	86	87.121	ENSLACG00000017781	SRPRA	100	70.200	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031951	Srpr	86	89.474	ENSLOCG00000002733	srpra	100	67.428	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031951	Srpr	100	94.523	ENSLAFG00000010252	SRPRA	100	94.523	Loxodonta_africana
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSMFAG00000032606	SRPRA	100	97.179	Macaca_fascicularis
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSMMUG00000007938	SRPRA	100	97.179	Macaca_mulatta
MGP_CAROLIEiJ_G0031951	Srpr	100	97.022	ENSMNEG00000030709	SRPRA	100	97.022	Macaca_nemestrina
MGP_CAROLIEiJ_G0031951	Srpr	100	97.335	ENSMLEG00000043404	SRPRA	100	97.335	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSMAMG00000000473	srpra	100	67.016	Mastacembelus_armatus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSMZEG00005013432	srpra	100	68.293	Maylandia_zebra
MGP_CAROLIEiJ_G0031951	Srpr	86	93.939	ENSMGAG00000000732	SRPRA	100	78.843	Meleagris_gallopavo
MGP_CAROLIEiJ_G0031951	Srpr	100	98.428	ENSMAUG00000015648	Srpr	100	98.428	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.768	ENSMICG00000015981	SRPRA	100	95.768	Microcebus_murinus
MGP_CAROLIEiJ_G0031951	Srpr	100	98.742	ENSMOCG00000008311	Srpr	100	98.742	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSMMOG00000005019	srpra	100	66.616	Mola_mola
MGP_CAROLIEiJ_G0031951	Srpr	100	89.828	ENSMODG00000004576	-	100	88.558	Monodelphis_domestica
MGP_CAROLIEiJ_G0031951	Srpr	73	91.892	ENSMODG00000029422	-	100	88.235	Monodelphis_domestica
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSMALG00000011343	srpra	100	68.493	Monopterus_albus
MGP_CAROLIEiJ_G0031951	Srpr	100	99.371	ENSMUSG00000032042	Srpr	100	99.371	Mus_musculus
MGP_CAROLIEiJ_G0031951	Srpr	100	99.528	MGP_PahariEiJ_G0014816	Srpr	100	99.528	Mus_pahari
MGP_CAROLIEiJ_G0031951	Srpr	100	94.461	MGP_SPRETEiJ_G0033075	Srpr	100	94.461	Mus_spretus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.768	ENSMPUG00000006626	SRPRA	100	95.768	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031951	Srpr	100	94.828	ENSMLUG00000017334	SRPRA	100	94.828	Myotis_lucifugus
MGP_CAROLIEiJ_G0031951	Srpr	100	97.488	ENSNGAG00000015686	Srpr	100	97.488	Nannospalax_galili
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSNBRG00000017311	srpra	100	67.841	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031951	Srpr	95	97.368	ENSNLEG00000007467	SRPRA	100	97.368	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031951	Srpr	94	90.333	ENSMEUG00000004956	SRPRA	100	89.333	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031951	Srpr	100	89.358	ENSOPRG00000013160	SRPRA	100	89.045	Ochotona_princeps
MGP_CAROLIEiJ_G0031951	Srpr	100	95.761	ENSODEG00000004730	SRPRA	100	95.761	Octodon_degus
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSONIG00000005324	srpra	100	68.293	Oreochromis_niloticus
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSOCUG00000017057	SRPRA	100	97.179	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSORLG00000014676	srpra	100	68.308	Oryzias_latipes
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSORLG00020009240	srpra	100	68.308	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSORLG00015015405	srpra	100	68.462	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSOMEG00000005872	srpra	100	68.817	Oryzias_melastigma
MGP_CAROLIEiJ_G0031951	Srpr	100	96.075	ENSOGAG00000008926	SRPRA	100	96.075	Otolemur_garnettii
MGP_CAROLIEiJ_G0031951	Srpr	100	91.420	ENSOARG00000012397	SRPRA	100	91.576	Ovis_aries
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSPPAG00000030813	SRPRA	100	97.179	Pan_paniscus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.775	ENSPPRG00000001542	SRPRA	100	95.462	Panthera_pardus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.618	ENSPTIG00000006989	SRPRA	100	95.305	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSPTRG00000028360	SRPRA	100	97.179	Pan_troglodytes
MGP_CAROLIEiJ_G0031951	Srpr	100	97.179	ENSPANG00000010858	SRPRA	100	97.179	Papio_anubis
MGP_CAROLIEiJ_G0031951	Srpr	86	87.879	ENSPKIG00000016106	srpra	100	64.625	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031951	Srpr	86	93.939	ENSPSIG00000012009	SRPRA	100	77.011	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSPMGG00000001393	srpra	100	67.228	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031951	Srpr	100	99.057	ENSPEMG00000018279	Srpr	100	99.057	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031951	Srpr	86	84.091	ENSPMAG00000009559	srpra	99	60.957	Petromyzon_marinus
MGP_CAROLIEiJ_G0031951	Srpr	100	89.671	ENSPCIG00000010207	SRPRA	100	89.358	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSPFOG00000003114	srpra	100	68.939	Poecilia_formosa
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSPLAG00000007323	srpra	100	68.939	Poecilia_latipinna
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSPMEG00000015658	srpra	100	68.939	Poecilia_mexicana
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSPREG00000004937	srpra	100	68.835	Poecilia_reticulata
MGP_CAROLIEiJ_G0031951	Srpr	89	98.684	ENSPPYG00000004045	SRPRA	100	98.684	Pongo_abelii
MGP_CAROLIEiJ_G0031951	Srpr	64	99.225	ENSPCAG00000003801	-	64	99.225	Procavia_capensis
MGP_CAROLIEiJ_G0031951	Srpr	100	96.082	ENSPCOG00000025726	SRPRA	100	96.082	Propithecus_coquereli
MGP_CAROLIEiJ_G0031951	Srpr	100	95.768	ENSPVAG00000000993	SRPRA	100	95.768	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSPNYG00000012371	srpra	100	68.293	Pundamilia_nyererei
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSPNAG00000013476	srpra	100	66.311	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031951	Srpr	100	99.057	ENSRNOG00000010543	Srpra	100	99.057	Rattus_norvegicus
MGP_CAROLIEiJ_G0031951	Srpr	100	96.865	ENSRBIG00000008702	SRPRA	100	96.865	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031951	Srpr	100	96.714	ENSRROG00000029494	SRPRA	100	96.714	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031951	Srpr	74	40.000	YDR292C	-	63	40.150	Saccharomyces_cerevisiae
MGP_CAROLIEiJ_G0031951	Srpr	100	96.552	ENSSBOG00000035892	SRPRA	100	96.552	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031951	Srpr	94	90.532	ENSSHAG00000009168	SRPRA	100	89.535	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031951	Srpr	86	88.636	ENSSFOG00015008837	srpra	100	65.679	Scleropages_formosus
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSSMAG00000002783	srpra	100	66.102	Scophthalmus_maximus
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSSDUG00000013920	srpra	100	66.458	Seriola_dumerili
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSSLDG00000008601	srpra	93	67.275	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031951	Srpr	86	95.455	ENSSARG00000012434	SRPRA	86	100.000	Sorex_araneus
MGP_CAROLIEiJ_G0031951	Srpr	86	91.667	ENSSPUG00000018221	SRPRA	100	77.315	Sphenodon_punctatus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSSPAG00000005103	srpra	100	67.890	Stegastes_partitus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.611	ENSSSCG00000015227	SRPRA	100	95.611	Sus_scrofa
MGP_CAROLIEiJ_G0031951	Srpr	86	94.697	ENSTGUG00000000815	SRPRA	100	74.917	Taeniopygia_guttata
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSTRUG00000006856	srpra	100	67.890	Takifugu_rubripes
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSTNIG00000010316	srpra	100	65.449	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031951	Srpr	100	94.992	ENSTTRG00000001558	SRPRA	100	94.053	Tursiops_truncatus
MGP_CAROLIEiJ_G0031951	Srpr	100	95.931	ENSUAMG00000005510	SRPRA	100	95.931	Ursus_americanus
MGP_CAROLIEiJ_G0031951	Srpr	86	97.727	ENSUMAG00000002269	SRPRA	99	87.237	Ursus_maritimus
MGP_CAROLIEiJ_G0031951	Srpr	69	99.225	ENSVPAG00000001077	SRPRA	75	99.225	Vicugna_pacos
MGP_CAROLIEiJ_G0031951	Srpr	100	95.455	ENSVVUG00000020094	SRPRA	100	95.455	Vulpes_vulpes
MGP_CAROLIEiJ_G0031951	Srpr	86	89.394	ENSXETG00000003920	srpra	100	62.805	Xenopus_tropicalis
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSXCOG00000001286	srpra	99	87.311	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031951	Srpr	86	90.152	ENSXMAG00000028401	srpra	100	68.902	Xiphophorus_maculatus