EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0031954 (Gene tree)
Gene ID
110301762
Gene Symbol
Rpusd4
Alias
2410001E19Rik
Full Name
RNA pseudouridine synthase D4
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
9679 bases
Position
chr9:30908091-30917769
Accession
110301762
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0087204PseudoU_synth_2PF00849.221.4e-3411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0087205-801--- (aa)--
MGP_CAROLIEiJ_T0087204-1819XM_021172396MGP_CAROLIEiJ_P0087204377 (aa)XP_021028055UPI000A315778
MGP_CAROLIEiJ_T0087207-507-MGP_CAROLIEiJ_P008720734 (aa)--
MGP_CAROLIEiJ_T0087206-495--- (aa)--
Gene Model
Click here to download MGP_CAROLIEiJ_G0031954's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031954's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_CAROLIEiJ_G0031954Rpusd47135.069MGP_CAROLIEiJ_G0028725Rpusd38035.069
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0031954Rpusd410079.310ENSG00000165526RPUSD410079.310Homo_sapiens
MGP_CAROLIEiJ_G0031954Rpusd48750.301ENSAPOG00000011024rpusd48350.301Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0031954Rpusd410078.515ENSAMEG00000000127-10078.515Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031954Rpusd48085.484ENSAMEG00000005953-10085.484Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031954Rpusd49048.105ENSACIG00000003533rpusd49849.112Amphilophus_citrinellus
MGP_CAROLIEiJ_G0031954Rpusd48850.595ENSAOCG00000015409rpusd48350.595Amphiprion_ocellaris
MGP_CAROLIEiJ_G0031954Rpusd48850.893ENSAPEG00000018935rpusd48350.893Amphiprion_percula
MGP_CAROLIEiJ_G0031954Rpusd48950.588ENSATEG00000008059rpusd48450.588Anabas_testudineus
MGP_CAROLIEiJ_G0031954Rpusd47360.932ENSAPLG00000013250RPUSD49959.661Anas_platyrhynchos
MGP_CAROLIEiJ_G0031954Rpusd49761.413ENSACAG00000000189RPUSD410061.413Anolis_carolinensis
MGP_CAROLIEiJ_G0031954Rpusd49980.645ENSANAG00000024050RPUSD410080.645Aotus_nancymaae
MGP_CAROLIEiJ_G0031954Rpusd49151.009ENSACLG00000020996rpusd48751.009Astatotilapia_calliptera
MGP_CAROLIEiJ_G0031954Rpusd49249.167ENSAMXG00000031479rpusd49450.595Astyanax_mexicanus
MGP_CAROLIEiJ_G0031954Rpusd410073.810ENSBTAG00000020900RPUSD410073.810Bos_taurus
MGP_CAROLIEiJ_G0031954Rpusd49881.081ENSCJAG00000042850RPUSD49381.081Callithrix_jacchus
MGP_CAROLIEiJ_G0031954Rpusd410078.571ENSCAFG00000010488RPUSD410078.571Canis_familiaris
MGP_CAROLIEiJ_G0031954Rpusd410078.571ENSCAFG00020010621RPUSD410078.571Canis_lupus_dingo
MGP_CAROLIEiJ_G0031954Rpusd410074.406ENSCHIG00000009975RPUSD410074.406Capra_hircus
MGP_CAROLIEiJ_G0031954Rpusd410080.371ENSTSYG00000008456RPUSD410080.371Carlito_syrichta
MGP_CAROLIEiJ_G0031954Rpusd46879.457ENSCAPG00000006040RPUSD410079.457Cavia_aperea
MGP_CAROLIEiJ_G0031954Rpusd410077.719ENSCPOG00000014971RPUSD410077.719Cavia_porcellus
MGP_CAROLIEiJ_G0031954Rpusd49981.989ENSCCAG00000027838RPUSD410081.989Cebus_capucinus
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSCATG00000041570RPUSD410080.106Cercocebus_atys
MGP_CAROLIEiJ_G0031954Rpusd410079.841ENSCLAG00000016553RPUSD410079.841Chinchilla_lanigera
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSCSAG00000002274RPUSD410080.106Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031954Rpusd47583.039ENSCHOG00000010249RPUSD410083.039Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031954Rpusd47568.421ENSCPBG00000011175RPUSD49868.421Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031954Rpusd47043.750ENSCSAVG00000000872-5343.750Ciona_savignyi
MGP_CAROLIEiJ_G0031954Rpusd410079.310ENSCANG00000039684RPUSD410079.310Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031954Rpusd410089.920ENSCGRG00001024141Rpusd410089.920Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031954Rpusd410089.920ENSCGRG00000014415Rpusd410089.920Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031954Rpusd48850.000ENSCVAG00000000392rpusd49550.000Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031954Rpusd48849.704ENSCVAG00000008761rpusd48649.704Cyprinodon_variegatus
MGP_CAROLIEiJ_G0031954Rpusd48551.227ENSDARG00000012674rpusd49151.227Danio_rerio
MGP_CAROLIEiJ_G0031954Rpusd410076.658ENSDNOG00000020026RPUSD410076.658Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSDORG00000016717Rpusd410080.106Dipodomys_ordii
MGP_CAROLIEiJ_G0031954Rpusd49978.133ENSETEG00000013953RPUSD49978.133Echinops_telfairi
MGP_CAROLIEiJ_G0031954Rpusd410079.310ENSEASG00005022982RPUSD410079.310Equus_asinus_asinus
MGP_CAROLIEiJ_G0031954Rpusd410079.310ENSECAG00000000557RPUSD410079.310Equus_caballus
MGP_CAROLIEiJ_G0031954Rpusd48079.891ENSEEUG00000014036RPUSD48079.891Erinaceus_europaeus
MGP_CAROLIEiJ_G0031954Rpusd49651.862ENSELUG00000008075rpusd49751.862Esox_lucius
MGP_CAROLIEiJ_G0031954Rpusd410078.249ENSFCAG00000029789RPUSD410078.249Felis_catus
MGP_CAROLIEiJ_G0031954Rpusd48958.112ENSFALG00000005171RPUSD49958.112Ficedula_albicollis
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSFDAG00000014307RPUSD410080.106Fukomys_damarensis
MGP_CAROLIEiJ_G0031954Rpusd49448.056ENSFHEG00000004329rpusd49148.056Fundulus_heteroclitus
MGP_CAROLIEiJ_G0031954Rpusd48550.765ENSGMOG00000017726rpusd49650.765Gadus_morhua
MGP_CAROLIEiJ_G0031954Rpusd49255.462ENSGALG00000024326RPUSD410056.233Gallus_gallus
MGP_CAROLIEiJ_G0031954Rpusd48748.673ENSGAFG00000021559rpusd48648.673Gambusia_affinis
MGP_CAROLIEiJ_G0031954Rpusd48549.693ENSGACG00000001657rpusd49750.000Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0031954Rpusd49561.003ENSGAGG00000000132RPUSD49861.003Gopherus_agassizii
MGP_CAROLIEiJ_G0031954Rpusd410078.780ENSGGOG00000016494RPUSD410078.780Gorilla_gorilla
MGP_CAROLIEiJ_G0031954Rpusd49151.009ENSHBUG00000022838rpusd48751.009Haplochromis_burtoni
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSHGLG00000002285RPUSD410080.106Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSHGLG00100006385RPUSD410080.106Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031954Rpusd48650.915ENSHCOG00000006612rpusd48350.915Hippocampus_comes
MGP_CAROLIEiJ_G0031954Rpusd48653.354ENSIPUG00000023879rusd48553.354Ictalurus_punctatus
MGP_CAROLIEiJ_G0031954Rpusd49781.044ENSSTOG00000025280RPUSD410081.044Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031954Rpusd49983.065ENSJJAG00000018673Rpusd410083.065Jaculus_jaculus
MGP_CAROLIEiJ_G0031954Rpusd48553.067ENSKMAG00000021805rpusd48453.067Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0031954Rpusd48651.524ENSLBEG00000020394rpusd49151.524Labrus_bergylta
MGP_CAROLIEiJ_G0031954Rpusd48561.420ENSLACG00000011028RPUSD49456.952Latimeria_chalumnae
MGP_CAROLIEiJ_G0031954Rpusd48747.879ENSLOCG00000003124rpusd48847.879Lepisosteus_oculatus
MGP_CAROLIEiJ_G0031954Rpusd410078.515ENSLAFG00000005211RPUSD410078.515Loxodonta_africana
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSMFAG00000039513RPUSD410080.106Macaca_fascicularis
MGP_CAROLIEiJ_G0031954Rpusd410079.841ENSMMUG00000007933RPUSD410079.841Macaca_mulatta
MGP_CAROLIEiJ_G0031954Rpusd410079.841ENSMNEG00000027414RPUSD410079.841Macaca_nemestrina
MGP_CAROLIEiJ_G0031954Rpusd410079.841ENSMLEG00000042461RPUSD410079.841Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031954Rpusd48749.254ENSMAMG00000023839rpusd48649.254Mastacembelus_armatus
MGP_CAROLIEiJ_G0031954Rpusd49151.009ENSMZEG00005011999rpusd48751.009Maylandia_zebra
MGP_CAROLIEiJ_G0031954Rpusd47461.071ENSMGAG00000000840RPUSD49958.025Meleagris_gallopavo
MGP_CAROLIEiJ_G0031954Rpusd410087.533ENSMAUG00000010280Rpusd410087.533Mesocricetus_auratus
MGP_CAROLIEiJ_G0031954Rpusd410079.310ENSMICG00000015979RPUSD49585.032Microcebus_murinus
MGP_CAROLIEiJ_G0031954Rpusd410086.207ENSMOCG00000000661Rpusd410086.207Microtus_ochrogaster
MGP_CAROLIEiJ_G0031954Rpusd48252.381ENSMMOG00000021731rpusd49352.381Mola_mola
MGP_CAROLIEiJ_G0031954Rpusd48674.847ENSMODG00000004521RPUSD48474.847Monodelphis_domestica
MGP_CAROLIEiJ_G0031954Rpusd48051.299ENSMALG00000005839rpusd49750.000Monopterus_albus
MGP_CAROLIEiJ_G0031954Rpusd410097.613ENSMUSG00000032044Rpusd410097.613Mus_musculus
MGP_CAROLIEiJ_G0031954Rpusd410096.552MGP_PahariEiJ_G0014819Rpusd410096.552Mus_pahari
MGP_CAROLIEiJ_G0031954Rpusd410097.613MGP_SPRETEiJ_G0033078Rpusd410097.613Mus_spretus
MGP_CAROLIEiJ_G0031954Rpusd49876.819ENSMPUG00000006608RPUSD49976.819Mustela_putorius_furo
MGP_CAROLIEiJ_G0031954Rpusd46784.252ENSMLUG00000029348-10084.252Myotis_lucifugus
MGP_CAROLIEiJ_G0031954Rpusd48983.582ENSMLUG00000017328-9678.630Myotis_lucifugus
MGP_CAROLIEiJ_G0031954Rpusd49982.713ENSNGAG00000020847Rpusd49982.713Nannospalax_galili
MGP_CAROLIEiJ_G0031954Rpusd48652.280ENSNBRG00000005207rpusd49552.280Neolamprologus_brichardi
MGP_CAROLIEiJ_G0031954Rpusd410080.106ENSNLEG00000007465RPUSD410080.106Nomascus_leucogenys
MGP_CAROLIEiJ_G0031954Rpusd49073.235ENSMEUG00000004370RPUSD49273.235Notamacropus_eugenii
MGP_CAROLIEiJ_G0031954Rpusd47058.113ENSOPRG00000013141-10058.113Ochotona_princeps
MGP_CAROLIEiJ_G0031954Rpusd410078.780ENSODEG00000004577RPUSD410078.780Octodon_degus
MGP_CAROLIEiJ_G0031954Rpusd49451.389ENSONIG00000018879rpusd49651.389Oreochromis_niloticus
MGP_CAROLIEiJ_G0031954Rpusd47769.153ENSOANG00000007247RPUSD410067.093Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031954Rpusd410079.630ENSOCUG00000017039RPUSD410079.630Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031954Rpusd49049.422ENSORLG00000002750rpusd49449.422Oryzias_latipes
MGP_CAROLIEiJ_G0031954Rpusd47752.381ENSORLG00020002044rpusd47352.381Oryzias_latipes_hni
MGP_CAROLIEiJ_G0031954Rpusd48551.070ENSORLG00015020034rpusd48151.070Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0031954Rpusd49148.711ENSOMEG00000004861rpusd48648.711Oryzias_melastigma
MGP_CAROLIEiJ_G0031954Rpusd410077.249ENSOGAG00000008922RPUSD410077.249Otolemur_garnettii
MGP_CAROLIEiJ_G0031954Rpusd49577.159ENSOARG00000012238RPUSD49875.202Ovis_aries
MGP_CAROLIEiJ_G0031954Rpusd410079.576ENSPPAG00000042883RPUSD49379.576Pan_paniscus
MGP_CAROLIEiJ_G0031954Rpusd410078.249ENSPPRG00000003081RPUSD410078.249Panthera_pardus
MGP_CAROLIEiJ_G0031954Rpusd410078.249ENSPTIG00000012059RPUSD410078.249Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031954Rpusd49582.633ENSPTRG00000004454RPUSD49582.633Pan_troglodytes
MGP_CAROLIEiJ_G0031954Rpusd410080.371ENSPANG00000015040RPUSD410080.371Papio_anubis
MGP_CAROLIEiJ_G0031954Rpusd48857.784ENSPKIG00000023986rpusd48557.784Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0031954Rpusd48364.331ENSPSIG00000014268RPUSD49964.331Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031954Rpusd49046.703ENSPMGG00000002806rpusd49546.703Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0031954Rpusd410080.637ENSPEMG00000000278Rpusd410080.637Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031954Rpusd48145.294ENSPMAG00000008183rpusd49845.294Petromyzon_marinus
MGP_CAROLIEiJ_G0031954Rpusd48974.251ENSPCIG00000010212RPUSD49274.251Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031954Rpusd48849.415ENSPFOG00000019030rpusd48949.415Poecilia_formosa
MGP_CAROLIEiJ_G0031954Rpusd48850.000ENSPLAG00000016848rpusd48650.000Poecilia_latipinna
MGP_CAROLIEiJ_G0031954Rpusd48848.824ENSPMEG00000017534rpusd48648.824Poecilia_mexicana
MGP_CAROLIEiJ_G0031954Rpusd49148.442ENSPREG00000005689rpusd48948.442Poecilia_reticulata
MGP_CAROLIEiJ_G0031954Rpusd410079.576ENSPPYG00000004043RPUSD410079.576Pongo_abelii
MGP_CAROLIEiJ_G0031954Rpusd48078.919ENSPCAG00000000753RPUSD48278.919Procavia_capensis
MGP_CAROLIEiJ_G0031954Rpusd49873.315ENSPCOG00000020694RPUSD410073.315Propithecus_coquereli
MGP_CAROLIEiJ_G0031954Rpusd410080.637ENSPVAG00000000988RPUSD410080.637Pteropus_vampyrus
MGP_CAROLIEiJ_G0031954Rpusd49149.856ENSPNYG00000009652rpusd48749.856Pundamilia_nyererei
MGP_CAROLIEiJ_G0031954Rpusd48852.096ENSPNAG00000012264rpusd48852.096Pygocentrus_nattereri
MGP_CAROLIEiJ_G0031954Rpusd410092.573ENSRNOG00000011567Rpusd410092.573Rattus_norvegicus
MGP_CAROLIEiJ_G0031954Rpusd410080.637ENSRBIG00000034842RPUSD410080.637Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031954Rpusd410080.637ENSRROG00000039753RPUSD410080.637Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031954Rpusd49980.914ENSSBOG00000030413RPUSD410080.914Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031954Rpusd48074.503ENSSHAG00000008304RPUSD410074.503Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031954Rpusd49355.182ENSSFOG00015006203rpusd49655.462Scleropages_formosus
MGP_CAROLIEiJ_G0031954Rpusd49150.144ENSSMAG00000020978rpusd49050.144Scophthalmus_maximus
MGP_CAROLIEiJ_G0031954Rpusd48948.387ENSSDUG00000013399rpusd48948.387Seriola_dumerili
MGP_CAROLIEiJ_G0031954Rpusd48948.680ENSSLDG00000023507rpusd48948.680Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0031954Rpusd49161.272ENSSPUG00000001401RPUSD49661.850Sphenodon_punctatus
MGP_CAROLIEiJ_G0031954Rpusd49648.509ENSSPAG00000012163rpusd49348.509Stegastes_partitus
MGP_CAROLIEiJ_G0031954Rpusd49978.820ENSSSCG00000015233RPUSD49978.820Sus_scrofa
MGP_CAROLIEiJ_G0031954Rpusd47961.333ENSTGUG00000000773RPUSD410061.333Taeniopygia_guttata
MGP_CAROLIEiJ_G0031954Rpusd48651.212ENSTRUG00000012283rpusd48451.212Takifugu_rubripes
MGP_CAROLIEiJ_G0031954Rpusd48650.303ENSTNIG00000014676rpusd48450.303Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0031954Rpusd410077.454ENSTTRG00000001555RPUSD410077.454Tursiops_truncatus
MGP_CAROLIEiJ_G0031954Rpusd410077.984ENSUMAG00000002219RPUSD410077.984Ursus_maritimus
MGP_CAROLIEiJ_G0031954Rpusd47081.509ENSVPAG00000001066RPUSD410081.509Vicugna_pacos
MGP_CAROLIEiJ_G0031954Rpusd410078.571ENSVVUG00000020101RPUSD410078.571Vulpes_vulpes
MGP_CAROLIEiJ_G0031954Rpusd48749.704ENSXCOG00000004676rpusd48849.555Xiphophorus_couchianus
MGP_CAROLIEiJ_G0031954Rpusd48749.704ENSXMAG00000023351rpusd48649.704Xiphophorus_maculatus

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