EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0031956 (Gene tree)
Gene ID: 110301562
Gene Symbol: Ddx25
Alias: GRTH
Full Name: DEAD-box helicase 25
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 22189 bases
Position: chr9:31169942-31192130
Accession: 110301562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0087214	DEAD	PF00270.29	7.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0087214	-	6947	-	MGP_CAROLIEiJ_P0087214	483 (aa)	XP_021027726	UPI000A3153DB

Gene Model

Click here to download MGP_CAROLIEiJ_G0031956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0031956's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0031956	Ddx25	77	38.298	MGP_CAROLIEiJ_G0017495	-	86	38.017
MGP_CAROLIEiJ_G0031956	Ddx25	81	31.328	MGP_CAROLIEiJ_G0031277	Ddx39	85	31.183
MGP_CAROLIEiJ_G0031956	Ddx25	72	30.628	MGP_CAROLIEiJ_G0015028	D1Pas1	55	31.510
MGP_CAROLIEiJ_G0031956	Ddx25	76	31.078	MGP_CAROLIEiJ_G0020017	Ddx17	56	32.275
MGP_CAROLIEiJ_G0031956	Ddx25	78	33.770	MGP_CAROLIEiJ_G0032122	Ddx6	73	32.973
MGP_CAROLIEiJ_G0031956	Ddx25	87	70.213	MGP_CAROLIEiJ_G0031567	Ddx19a	88	70.309
MGP_CAROLIEiJ_G0031956	Ddx25	81	30.732	MGP_CAROLIEiJ_G0018893	Ddx4	53	30.670
MGP_CAROLIEiJ_G0031956	Ddx25	87	69.834	MGP_CAROLIEiJ_G0031568	Ddx19b	88	69.834
MGP_CAROLIEiJ_G0031956	Ddx25	72	30.628	MGP_CAROLIEiJ_G0032941	Ddx3x	55	31.510

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSG00000109832	DDX25	100	94.851	Homo_sapiens
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.802	ENSAMEG00000000138	DDX25	100	93.802	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0031956	Ddx25	75	70.330	ENSAPLG00000007485	-	99	70.330	Anas_platyrhynchos
MGP_CAROLIEiJ_G0031956	Ddx25	98	68.153	ENSACAG00000000173	DDX25	85	73.684	Anolis_carolinensis
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSANAG00000030502	DDX25	100	93.168	Aotus_nancymaae
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.031	ENSBTAG00000004266	DDX25	100	95.031	Bos_taurus
MGP_CAROLIEiJ_G0031956	Ddx25	100	91.718	ENSCJAG00000008600	DDX25	100	91.718	Callithrix_jacchus
MGP_CAROLIEiJ_G0031956	Ddx25	96	95.455	ENSCAFG00000010519	DDX25	100	97.290	Canis_familiaris
MGP_CAROLIEiJ_G0031956	Ddx25	95	91.684	ENSCAFG00020010651	DDX25	99	91.684	Canis_lupus_dingo
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.031	ENSCHIG00000014324	-	100	95.031	Capra_hircus
MGP_CAROLIEiJ_G0031956	Ddx25	100	92.340	ENSTSYG00000014746	DDX25	100	91.511	Carlito_syrichta
MGP_CAROLIEiJ_G0031956	Ddx25	96	93.723	ENSCAPG00000015352	DDX25	97	93.723	Cavia_aperea
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSCPOG00000011456	DDX25	100	93.168	Cavia_porcellus
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.375	ENSCCAG00000027629	DDX25	100	93.375	Cebus_capucinus
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.789	ENSCATG00000042562	DDX25	100	93.789	Cercocebus_atys
MGP_CAROLIEiJ_G0031956	Ddx25	100	92.340	ENSCLAG00000015793	DDX25	100	92.340	Chinchilla_lanigera
MGP_CAROLIEiJ_G0031956	Ddx25	100	90.683	ENSCSAG00000002279	DDX25	100	90.683	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0031956	Ddx25	60	92.683	ENSCHOG00000007751	DDX25	60	92.683	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0031956	Ddx25	84	79.361	ENSCPBG00000011165	DDX25	93	79.208	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0031956	Ddx25	84	61.576	ENSCING00000007756	-	86	61.005	Ciona_intestinalis
MGP_CAROLIEiJ_G0031956	Ddx25	86	60.287	ENSCSAVG00000009116	-	88	60.287	Ciona_savignyi
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.996	ENSCANG00000028422	DDX25	100	93.996	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0031956	Ddx25	100	99.586	ENSCGRG00001021499	Ddx25	100	99.586	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0031956	Ddx25	100	99.586	ENSCGRG00000009695	Ddx25	100	99.586	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.859	ENSDNOG00000007989	DDX25	100	95.859	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0031956	Ddx25	100	96.894	ENSDORG00000001822	Ddx25	100	96.894	Dipodomys_ordii
MGP_CAROLIEiJ_G0031956	Ddx25	72	72.832	ENSETEG00000006048	DDX25	80	94.350	Echinops_telfairi
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.824	ENSEASG00005023001	DDX25	100	94.824	Equus_asinus_asinus
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.824	ENSECAG00000009643	DDX25	100	94.824	Equus_caballus
MGP_CAROLIEiJ_G0031956	Ddx25	96	90.693	ENSEEUG00000010847	DDX25	100	90.260	Erinaceus_europaeus
MGP_CAROLIEiJ_G0031956	Ddx25	100	97.308	ENSFCAG00000005341	DDX25	100	97.308	Felis_catus
MGP_CAROLIEiJ_G0031956	Ddx25	86	69.157	ENSFALG00000005149	DDX25	99	69.157	Ficedula_albicollis
MGP_CAROLIEiJ_G0031956	Ddx25	100	91.304	ENSFDAG00000018479	DDX25	100	90.683	Fukomys_damarensis
MGP_CAROLIEiJ_G0031956	Ddx25	87	69.668	ENSGALG00000039863	DDX25	84	67.431	Gallus_gallus
MGP_CAROLIEiJ_G0031956	Ddx25	84	80.049	ENSGAGG00000015750	DDX25	96	79.950	Gopherus_agassizii
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSGGOG00000015054	DDX25	100	93.168	Gorilla_gorilla
MGP_CAROLIEiJ_G0031956	Ddx25	100	90.890	ENSHGLG00000000748	DDX25	100	90.890	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0031956	Ddx25	100	90.683	ENSHGLG00100010209	DDX25	100	90.683	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0031956	Ddx25	100	96.687	ENSSTOG00000003749	DDX25	100	96.687	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0031956	Ddx25	100	97.516	ENSJJAG00000012739	Ddx25	100	97.516	Jaculus_jaculus
MGP_CAROLIEiJ_G0031956	Ddx25	88	65.105	ENSLACG00000017651	DDX25	89	65.330	Latimeria_chalumnae
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.238	ENSLAFG00000000532	DDX25	100	95.238	Loxodonta_africana
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.996	ENSMFAG00000040048	DDX25	100	93.996	Macaca_fascicularis
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.996	ENSMMUG00000007624	DDX25	100	93.996	Macaca_mulatta
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.996	ENSMNEG00000034512	DDX25	100	93.996	Macaca_nemestrina
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.582	ENSMLEG00000041703	DDX25	100	93.582	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0031956	Ddx25	57	70.036	ENSMGAG00000008093	-	99	70.290	Meleagris_gallopavo
MGP_CAROLIEiJ_G0031956	Ddx25	100	99.379	ENSMAUG00000012406	Ddx25	100	99.379	Mesocricetus_auratus
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.031	ENSMICG00000004073	DDX25	100	95.031	Microcebus_murinus
MGP_CAROLIEiJ_G0031956	Ddx25	100	98.137	ENSMOCG00000002484	Ddx25	100	98.137	Microtus_ochrogaster
MGP_CAROLIEiJ_G0031956	Ddx25	100	91.097	ENSMODG00000004275	DDX25	100	91.097	Monodelphis_domestica
MGP_CAROLIEiJ_G0031956	Ddx25	100	99.587	ENSMUSG00000032101	Ddx25	100	99.587	Mus_musculus
MGP_CAROLIEiJ_G0031956	Ddx25	100	98.758	MGP_PahariEiJ_G0014821	Ddx25	100	98.758	Mus_pahari
MGP_CAROLIEiJ_G0031956	Ddx25	100	99.587	MGP_SPRETEiJ_G0033080	Ddx25	100	99.587	Mus_spretus
MGP_CAROLIEiJ_G0031956	Ddx25	99	96.258	ENSMPUG00000006577	DDX25	95	95.859	Mustela_putorius_furo
MGP_CAROLIEiJ_G0031956	Ddx25	96	74.522	ENSMLUG00000008700	DDX25	99	73.251	Myotis_lucifugus
MGP_CAROLIEiJ_G0031956	Ddx25	100	97.723	ENSNGAG00000006246	Ddx25	100	97.723	Nannospalax_galili
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.375	ENSNLEG00000007461	DDX25	100	93.375	Nomascus_leucogenys
MGP_CAROLIEiJ_G0031956	Ddx25	100	82.195	ENSMEUG00000000296	DDX25	100	82.195	Notamacropus_eugenii
MGP_CAROLIEiJ_G0031956	Ddx25	92	92.601	ENSOPRG00000002090	-	99	91.928	Ochotona_princeps
MGP_CAROLIEiJ_G0031956	Ddx25	100	89.855	ENSODEG00000004301	DDX25	100	89.648	Octodon_degus
MGP_CAROLIEiJ_G0031956	Ddx25	89	85.417	ENSOANG00000012968	DDX25	94	86.256	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.639	ENSOCUG00000004476	DDX25	100	94.227	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.445	ENSOGAG00000013409	DDX25	100	95.445	Otolemur_garnettii
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.835	ENSOARG00000011935	DDX25	100	94.835	Ovis_aries
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSPPAG00000027196	DDX25	100	93.168	Pan_paniscus
MGP_CAROLIEiJ_G0031956	Ddx25	100	97.308	ENSPPRG00000005392	DDX25	100	97.308	Panthera_pardus
MGP_CAROLIEiJ_G0031956	Ddx25	76	97.832	ENSPTIG00000018953	DDX25	100	97.832	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSPTRG00000004450	DDX25	100	93.168	Pan_troglodytes
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.203	ENSPANG00000005372	DDX25	100	94.203	Papio_anubis
MGP_CAROLIEiJ_G0031956	Ddx25	88	78.588	ENSPSIG00000012606	DDX25	99	78.487	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0031956	Ddx25	100	99.172	ENSPEMG00000009334	Ddx25	100	99.172	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0031956	Ddx25	100	89.648	ENSPCIG00000010222	DDX25	100	89.648	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.168	ENSPPYG00000004041	DDX25	100	93.168	Pongo_abelii
MGP_CAROLIEiJ_G0031956	Ddx25	100	79.296	ENSPCAG00000000455	DDX25	100	79.296	Procavia_capensis
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.617	ENSPCOG00000016873	DDX25	100	94.617	Propithecus_coquereli
MGP_CAROLIEiJ_G0031956	Ddx25	65	93.968	ENSPVAG00000014265	DDX25	100	93.968	Pteropus_vampyrus
MGP_CAROLIEiJ_G0031956	Ddx25	100	98.965	ENSRNOG00000012260	Ddx25	100	98.965	Rattus_norvegicus
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.789	ENSRBIG00000034284	DDX25	100	93.789	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0031956	Ddx25	100	94.203	ENSRROG00000033468	DDX25	100	94.203	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0031956	Ddx25	100	93.375	ENSSBOG00000010854	DDX25	100	93.375	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0031956	Ddx25	100	91.304	ENSSHAG00000002011	DDX25	100	91.304	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0031956	Ddx25	84	88.119	ENSSARG00000013832	DDX25	99	88.089	Sorex_araneus
MGP_CAROLIEiJ_G0031956	Ddx25	87	77.910	ENSSPUG00000001492	DDX25	86	82.143	Sphenodon_punctatus
MGP_CAROLIEiJ_G0031956	Ddx25	100	95.445	ENSSSCG00000015223	DDX25	100	97.290	Sus_scrofa
MGP_CAROLIEiJ_G0031956	Ddx25	88	68.558	ENSTGUG00000000780	DDX25	99	68.646	Taeniopygia_guttata
MGP_CAROLIEiJ_G0031956	Ddx25	100	85.507	ENSTTRG00000012183	DDX25	100	85.507	Tursiops_truncatus
MGP_CAROLIEiJ_G0031956	Ddx25	99	93.542	ENSUMAG00000001803	DDX25	99	93.542	Ursus_maritimus
MGP_CAROLIEiJ_G0031956	Ddx25	92	76.697	ENSVPAG00000001505	DDX25	100	76.471	Vicugna_pacos
MGP_CAROLIEiJ_G0031956	Ddx25	96	95.708	ENSVVUG00000020142	DDX25	93	96.825	Vulpes_vulpes
MGP_CAROLIEiJ_G0031956	Ddx25	97	58.439	ENSXETG00000000026	ddx25	88	63.658	Xenopus_tropicalis