EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032197 (Gene tree)
Gene ID: 110301897
Gene Symbol: Fdxacb1
Alias: D630004A14Rik
Full Name: ferredoxin-fold anticodon binding domain containing 1
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 4401 bases
Position: chr9:47616642-47621042
Accession: 110301897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0087809	FDX-ACB	PF03147.14	5.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0087807	-	2496	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0087811	-	518	-	MGP_CAROLIEiJ_P0087811	117 (aa)	-	-
MGP_CAROLIEiJ_T0087809	-	2002	XM_021172603	MGP_CAROLIEiJ_P0087809	622 (aa)	XP_021028262	UPI000A317727
MGP_CAROLIEiJ_T0087808	-	864	-	MGP_CAROLIEiJ_P0087808	115 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0032197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSG00000255561	FDXACB1	100	72.115	Homo_sapiens
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	35.810	ENSAPOG00000009726	fdxacb1	100	35.810	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	35.810	ENSAPOG00000009041	FDXACB1	100	35.810	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	34.365	ENSACIG00000004208	fdxacb1	100	34.675	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	34.333	ENSAOCG00000007455	fdxacb1	99	34.333	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	34.828	ENSAPEG00000023857	fdxacb1	99	34.828	Amphiprion_percula
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	34.808	ENSATEG00000020757	fdxacb1	100	34.808	Anabas_testudineus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	46.795	ENSAPLG00000004681	FDXACB1	99	46.795	Anas_platyrhynchos
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.436	ENSANAG00000022744	FDXACB1	100	72.436	Aotus_nancymaae
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	33.982	ENSACLG00000020497	fdxacb1	100	33.982	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	33.982	ENSACLG00000027415	-	100	33.982	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032197	Fdxacb1	97	40.946	ENSAMXG00000038372	fdxacb1	99	40.670	Astyanax_mexicanus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	70.994	ENSBTAG00000004949	FDXACB1	100	70.994	Bos_taurus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSCJAG00000040413	FDXACB1	100	72.115	Callithrix_jacchus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.589	ENSCAFG00020006314	FDXACB1	100	71.589	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.795	ENSCHIG00000017261	FDXACB1	100	71.795	Capra_hircus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.276	ENSTSYG00000029218	FDXACB1	100	72.276	Carlito_syrichta
MGP_CAROLIEiJ_G0032197	Fdxacb1	59	89.286	ENSCAPG00000010478	-	100	89.286	Cavia_aperea
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	69.872	ENSCPOG00000032584	FDXACB1	100	69.872	Cavia_porcellus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.635	ENSCCAG00000024232	FDXACB1	100	71.635	Cebus_capucinus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.436	ENSCATG00000035600	FDXACB1	100	72.436	Cercocebus_atys
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.108	ENSCLAG00000015613	FDXACB1	100	71.108	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.276	ENSCSAG00000002878	FDXACB1	100	72.276	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	68.850	ENSCHOG00000003037	FDXACB1	99	68.850	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	50.861	ENSCPBG00000009087	FDXACB1	100	50.861	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.276	ENSCANG00000043844	FDXACB1	100	72.276	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	78.135	ENSCGRG00001023825	Fdxacb1	98	78.135	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	78.135	ENSCGRG00000001752	Fdxacb1	98	78.135	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	34.869	ENSCSEG00000006964	fdxacb1	99	34.869	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.285	ENSCVAG00000013005	fdxacb1	99	35.285	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	41.667	ENSDARG00000095750	fdxacb1	99	41.667	Danio_rerio
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	69.808	ENSDNOG00000037748	FDXACB1	100	69.808	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	69.920	ENSDORG00000028060	Fdxacb1	100	69.920	Dipodomys_ordii
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	68.480	ENSETEG00000004898	FDXACB1	99	68.480	Echinops_telfairi
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	73.237	ENSEASG00005007198	FDXACB1	100	73.237	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	73.237	ENSECAG00000009561	FDXACB1	100	73.237	Equus_caballus
MGP_CAROLIEiJ_G0032197	Fdxacb1	84	69.725	ENSEEUG00000009839	FDXACB1	83	69.725	Erinaceus_europaeus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	32.794	ENSELUG00000011250	fdxacb1	99	33.089	Esox_lucius
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.154	ENSFCAG00000024559	FDXACB1	100	71.154	Felis_catus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	47.059	ENSFALG00000006177	FDXACB1	99	47.059	Ficedula_albicollis
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	70.947	ENSFDAG00000016115	FDXACB1	100	71.108	Fukomys_damarensis
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.455	ENSFHEG00000016602	fdxacb1	99	35.455	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	45.840	ENSGALG00000007967	FDXACB1	100	45.840	Gallus_gallus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.489	ENSGAFG00000001162	fdxacb1	95	35.489	Gambusia_affinis
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.229	ENSGACG00000020639	fdxacb1	99	35.322	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	50.940	ENSGAGG00000020645	FDXACB1	98	51.724	Gopherus_agassizii
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.436	ENSGGOG00000037643	FDXACB1	100	72.436	Gorilla_gorilla
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	33.681	ENSHBUG00000003489	fdxacb1	100	33.681	Haplochromis_burtoni
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.071	ENSHGLG00000004171	FDXACB1	100	72.071	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.071	ENSHGLG00100017458	FDXACB1	100	72.071	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	36.137	ENSHCOG00000018986	fdxacb1	99	36.137	Hippocampus_comes
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	38.880	ENSIPUG00000022559	FDXACB1	99	38.669	Ictalurus_punctatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.071	ENSJJAG00000010367	Fdxacb1	100	72.071	Jaculus_jaculus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	36.624	ENSKMAG00000022235	fdxacb1	99	36.465	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	34.421	ENSLBEG00000016100	fdxacb1	100	34.421	Labrus_bergylta
MGP_CAROLIEiJ_G0032197	Fdxacb1	88	54.286	ENSLACG00000018780	FDXACB1	99	54.286	Latimeria_chalumnae
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.885	ENSLAFG00000014650	FDXACB1	100	71.885	Loxodonta_africana
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.955	ENSMFAG00000002448	FDXACB1	100	71.955	Macaca_fascicularis
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSMNEG00000041539	FDXACB1	100	72.115	Macaca_nemestrina
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	34.610	ENSMAMG00000018674	fdxacb1	98	34.610	Mastacembelus_armatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	33.982	ENSMZEG00005018799	fdxacb1	100	33.982	Maylandia_zebra
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	78.296	ENSMAUG00000019310	Fdxacb1	100	78.296	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	73.397	ENSMICG00000045510	FDXACB1	100	73.397	Microcebus_murinus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	78.939	ENSMOCG00000011835	Fdxacb1	100	78.939	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	37.420	ENSMMOG00000018749	fdxacb1	99	36.943	Mola_mola
MGP_CAROLIEiJ_G0032197	Fdxacb1	63	56.650	ENSMALG00000007153	fdxacb1	81	56.650	Monopterus_albus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	96.785	ENSMUSG00000037845	Fdxacb1	100	96.785	Mus_musculus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	94.373	MGP_PahariEiJ_G0015065	Fdxacb1	100	94.373	Mus_pahari
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	96.624	MGP_SPRETEiJ_G0033336	Fdxacb1	100	96.624	Mus_spretus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	73.077	ENSMPUG00000003585	FDXACB1	100	73.077	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.800	ENSMLUG00000014872	FDXACB1	100	72.800	Myotis_lucifugus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.552	ENSNGAG00000014606	Fdxacb1	100	72.552	Nannospalax_galili
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	35.658	ENSNBRG00000006939	fdxacb1	100	35.658	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.917	ENSNLEG00000030387	FDXACB1	100	72.917	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	60.897	ENSMEUG00000003077	FDXACB1	99	60.897	Notamacropus_eugenii
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	66.080	ENSOPRG00000012593	FDXACB1	99	66.080	Ochotona_princeps
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	70.465	ENSODEG00000010360	FDXACB1	100	70.465	Octodon_degus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	36.306	ENSONIG00000004939	fdxacb1	100	36.306	Oreochromis_niloticus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	51.520	ENSOANG00000003844	-	99	51.520	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	33.130	ENSORLG00020008420	fdxacb1	99	33.130	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	35.258	ENSOMEG00000019353	fdxacb1	99	35.160	Oryzias_melastigma
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.795	ENSOARG00000015064	FDXACB1	99	71.795	Ovis_aries
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSPPAG00000030196	FDXACB1	100	72.115	Pan_paniscus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.314	ENSPPRG00000005967	FDXACB1	100	71.314	Panthera_pardus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.154	ENSPTIG00000016420	FDXACB1	100	71.154	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSPTRG00000004272	FDXACB1	100	72.115	Pan_troglodytes
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSPANG00000019268	FDXACB1	100	72.115	Papio_anubis
MGP_CAROLIEiJ_G0032197	Fdxacb1	97	41.708	ENSPKIG00000009407	fdxacb1	99	41.280	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032197	Fdxacb1	86	45.714	ENSPMGG00000004912	fdxacb1	98	45.714	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	79.483	ENSPEMG00000020188	Fdxacb1	99	79.483	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.940	ENSPFOG00000022156	fdxacb1	99	35.940	Poecilia_formosa
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.789	ENSPLAG00000019966	fdxacb1	99	35.789	Poecilia_latipinna
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.940	ENSPMEG00000002110	fdxacb1	99	35.940	Poecilia_mexicana
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.639	ENSPREG00000017453	fdxacb1	99	35.639	Poecilia_reticulata
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.635	ENSPPYG00000003866	FDXACB1	99	71.635	Pongo_abelii
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	69.231	ENSPCAG00000000333	FDXACB1	99	69.391	Procavia_capensis
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	73.077	ENSPCOG00000027443	FDXACB1	100	73.077	Propithecus_coquereli
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.071	ENSPVAG00000009610	FDXACB1	99	72.071	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	33.982	ENSPNYG00000012981	fdxacb1	100	33.982	Pundamilia_nyererei
MGP_CAROLIEiJ_G0032197	Fdxacb1	97	41.148	ENSPNAG00000003284	fdxacb1	99	40.829	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032197	Fdxacb1	90	87.611	ENSRNOG00000010743	Fdxacb1	97	87.611	Rattus_norvegicus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.115	ENSRBIG00000014195	FDXACB1	100	72.115	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.955	ENSRROG00000045453	FDXACB1	100	71.955	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.955	ENSSBOG00000027732	FDXACB1	100	71.955	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	40.600	ENSSFOG00015009862	fdxacb1	99	40.916	Scleropages_formosus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	33.988	ENSSMAG00000010250	fdxacb1	99	33.988	Scophthalmus_maximus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.215	ENSSDUG00000004461	fdxacb1	98	35.215	Seriola_dumerili
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	34.621	ENSSLDG00000017388	fdxacb1	98	34.621	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	66.987	ENSSARG00000002541	FDXACB1	99	66.987	Sorex_araneus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	47.152	ENSSPUG00000010598	FDXACB1	99	47.152	Sphenodon_punctatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.382	ENSSPAG00000007903	fdxacb1	99	35.382	Stegastes_partitus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.480	ENSSSCG00000021871	FDXACB1	100	72.480	Sus_scrofa
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	48.470	ENSTGUG00000000326	FDXACB1	99	48.470	Taeniopygia_guttata
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	36.918	ENSTRUG00000017134	fdxacb1	99	36.918	Takifugu_rubripes
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	36.554	ENSTNIG00000009977	fdxacb1	99	36.554	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	70.192	ENSTBEG00000010204	FDXACB1	99	70.192	Tupaia_belangeri
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	73.237	ENSTTRG00000010496	FDXACB1	99	73.237	Tursiops_truncatus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.596	ENSUAMG00000018595	FDXACB1	100	72.596	Ursus_americanus
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	72.596	ENSUMAG00000006940	FDXACB1	100	72.596	Ursus_maritimus
MGP_CAROLIEiJ_G0032197	Fdxacb1	90	74.766	ENSVPAG00000000044	FDXACB1	89	74.766	Vicugna_pacos
MGP_CAROLIEiJ_G0032197	Fdxacb1	100	71.268	ENSVVUG00000015845	FDXACB1	100	71.268	Vulpes_vulpes
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	40.566	ENSXETG00000010172	fdxacb1	99	40.566	Xenopus_tropicalis
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	36.306	ENSXCOG00000007930	fdxacb1	96	45.205	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0032197	Fdxacb1	99	35.789	ENSXMAG00000010929	fdxacb1	99	35.789	Xiphophorus_maculatus