EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032210 (Gene tree)
Gene ID: 110300985
Gene Symbol: Zc3h12c
Alias: C230027N18Rik
Full Name: zinc finger CCCH-type containing 12C
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 57632 bases
Position: chr9:48936775-48994406
Accession: 110300985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0087859	RNase_Zc3h12a	PF11977.8	6.2e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0087860	-	2655	-	MGP_CAROLIEiJ_P0087860	884 (aa)	-	-
MGP_CAROLIEiJ_T0087859	-	6165	XM_021171199	MGP_CAROLIEiJ_P0087859	903 (aa)	XP_021026858	UPI000A31A461

Gene Model

Click here to download MGP_CAROLIEiJ_G0032210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0032210	Zc3h12c	92	51.655	MGP_CAROLIEiJ_G0033247	-	66	88.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.588	ENSG00000149289	ZC3H12C	100	92.723	Homo_sapiens
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.123	ENSAMEG00000009188	ZC3H12C	99	92.123	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032210	Zc3h12c	71	88.160	ENSAPLG00000002854	ZC3H12C	100	88.160	Anas_platyrhynchos
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	82.486	ENSACAG00000001031	ZC3H12C	98	82.486	Anolis_carolinensis
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.702	ENSANAG00000026999	ZC3H12C	99	92.702	Aotus_nancymaae
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	91.073	ENSBTAG00000008732	ZC3H12C	100	91.073	Bos_taurus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.360	ENSCJAG00000010319	ZC3H12C	99	92.360	Callithrix_jacchus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	89.168	ENSCAFG00000014297	ZC3H12C	99	89.168	Canis_familiaris
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	89.168	ENSCAFG00020006999	ZC3H12C	99	88.864	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	91.073	ENSCHIG00000021221	ZC3H12C	100	91.073	Capra_hircus
MGP_CAROLIEiJ_G0032210	Zc3h12c	91	90.965	ENSTSYG00000005412	ZC3H12C	99	91.104	Carlito_syrichta
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	88.838	ENSCAPG00000011610	ZC3H12C	99	89.041	Cavia_aperea
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	88.927	ENSCPOG00000032962	ZC3H12C	99	88.927	Cavia_porcellus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.534	ENSCCAG00000022395	ZC3H12C	100	92.723	Cebus_capucinus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.081	ENSCATG00000041641	ZC3H12C	100	92.081	Cercocebus_atys
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.237	ENSCLAG00000012577	ZC3H12C	100	92.371	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	91.629	ENSCSAG00000002945	ZC3H12C	100	91.629	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	85.210	ENSCHOG00000013202	-	100	85.294	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	84.371	ENSCPBG00000021043	ZC3H12C	100	84.930	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.123	ENSCANG00000040994	ZC3H12C	99	92.123	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	95.928	ENSCGRG00001013672	Zc3h12c	100	95.928	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	95.898	ENSCGRG00000001308	Zc3h12c	100	95.898	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	89.636	ENSDNOG00000013040	ZC3H12C	99	89.636	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	90.868	ENSDORG00000009134	Zc3h12c	99	90.868	Dipodomys_ordii
MGP_CAROLIEiJ_G0032210	Zc3h12c	71	95.040	ENSETEG00000008027	ZC3H12C	100	95.040	Echinops_telfairi
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.195	ENSEASG00005010098	ZC3H12C	100	92.195	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.132	ENSECAG00000000462	ZC3H12C	100	92.254	Equus_caballus
MGP_CAROLIEiJ_G0032210	Zc3h12c	64	90.351	ENSEEUG00000005709	-	99	90.351	Erinaceus_europaeus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	90.536	ENSFCAG00000010665	ZC3H12C	99	90.536	Felis_catus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	83.521	ENSFALG00000008776	ZC3H12C	99	83.579	Ficedula_albicollis
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.580	ENSFDAG00000017997	ZC3H12C	100	93.075	Fukomys_damarensis
MGP_CAROLIEiJ_G0032210	Zc3h12c	96	83.781	ENSGALG00000017154	ZC3H12C	100	83.781	Gallus_gallus
MGP_CAROLIEiJ_G0032210	Zc3h12c	95	83.214	ENSGAGG00000024154	ZC3H12C	86	83.593	Gopherus_agassizii
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.246	ENSGGOG00000010117	ZC3H12C	99	92.246	Gorilla_gorilla
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.534	ENSHGLG00000019021	ZC3H12C	100	92.534	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.534	ENSHGLG00100007295	ZC3H12C	100	92.534	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	94.131	ENSSTOG00000022143	ZC3H12C	100	94.863	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	93.836	ENSJJAG00000001147	Zc3h12c	100	93.836	Jaculus_jaculus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	74.860	ENSLACG00000009305	ZC3H12C	99	74.860	Latimeria_chalumnae
MGP_CAROLIEiJ_G0032210	Zc3h12c	71	94.737	ENSLAFG00000016296	ZC3H12C	100	94.737	Loxodonta_africana
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.081	ENSMFAG00000042068	ZC3H12C	100	92.081	Macaca_fascicularis
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.246	ENSMMUG00000048435	ZC3H12C	99	92.246	Macaca_mulatta
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.081	ENSMNEG00000032663	ZC3H12C	100	92.371	Macaca_nemestrina
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.132	ENSMLEG00000032083	ZC3H12C	99	92.132	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	82.559	ENSMGAG00000015143	ZC3H12C	99	82.653	Meleagris_gallopavo
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	94.801	ENSMAUG00000020412	Zc3h12c	100	94.801	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	93.439	ENSMICG00000011455	ZC3H12C	100	93.897	Microcebus_murinus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	95.903	ENSMOCG00000020090	Zc3h12c	100	95.903	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032210	Zc3h12c	96	88.435	ENSMODG00000014555	ZC3H12C	100	88.435	Monodelphis_domestica
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	98.893	ENSMUSG00000035164	Zc3h12c	100	98.893	Mus_musculus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	97.172	MGP_PahariEiJ_G0015078	Zc3h12c	100	97.172	Mus_pahari
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	98.671	MGP_SPRETEiJ_G0033350	Zc3h12c	100	98.671	Mus_spretus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	86.600	ENSMPUG00000005888	ZC3H12C	100	86.600	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	91.438	ENSMLUG00000017189	ZC3H12C	100	91.438	Myotis_lucifugus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	93.577	ENSNGAG00000023957	Zc3h12c	100	93.577	Nannospalax_galili
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.474	ENSNLEG00000029829	ZC3H12C	99	92.474	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	84.869	ENSMEUG00000015398	ZC3H12C	100	84.869	Notamacropus_eugenii
MGP_CAROLIEiJ_G0032210	Zc3h12c	74	81.106	ENSOPRG00000003370	-	98	81.106	Ochotona_princeps
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	89.522	ENSODEG00000011026	ZC3H12C	100	89.522	Octodon_degus
MGP_CAROLIEiJ_G0032210	Zc3h12c	71	84.494	ENSOANG00000006242	-	99	84.494	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.702	ENSOCUG00000005283	ZC3H12C	99	92.702	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.132	ENSOGAG00000013223	ZC3H12C	99	92.132	Otolemur_garnettii
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	86.902	ENSOARG00000012999	ZC3H12C	97	92.246	Ovis_aries
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.588	ENSPPAG00000041914	ZC3H12C	99	92.588	Pan_paniscus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	90.308	ENSPPRG00000006582	ZC3H12C	99	90.308	Panthera_pardus
MGP_CAROLIEiJ_G0032210	Zc3h12c	86	88.006	ENSPTIG00000009995	ZC3H12C	99	88.006	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.588	ENSPTRG00000050494	ZC3H12C	99	92.588	Pan_troglodytes
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.081	ENSPANG00000023930	ZC3H12C	100	92.081	Papio_anubis
MGP_CAROLIEiJ_G0032210	Zc3h12c	96	83.449	ENSPSIG00000005959	ZC3H12C	100	83.796	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	86.756	ENSPEMG00000008502	Zc3h12c	100	95.054	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032210	Zc3h12c	96	88.551	ENSPCIG00000022169	ZC3H12C	100	88.551	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032210	Zc3h12c	96	92.371	ENSPPYG00000003851	ZC3H12C	100	92.371	Pongo_abelii
MGP_CAROLIEiJ_G0032210	Zc3h12c	64	94.737	ENSPCAG00000015682	ZC3H12C	100	94.737	Procavia_capensis
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	93.501	ENSPCOG00000024737	ZC3H12C	99	93.501	Propithecus_coquereli
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	90.795	ENSPVAG00000014329	ZC3H12C	99	90.795	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	96.346	ENSRNOG00000012470	Zc3h12c	100	96.346	Rattus_norvegicus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.237	ENSRBIG00000040441	ZC3H12C	100	92.254	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.237	ENSRROG00000004335	ZC3H12C	99	92.237	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.930	ENSSBOG00000025582	ZC3H12C	100	92.958	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	85.585	ENSSHAG00000005597	ZC3H12C	100	88.318	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032210	Zc3h12c	71	95.215	ENSSARG00000003433	ZC3H12C	100	95.215	Sorex_araneus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	85.114	ENSSPUG00000001832	ZC3H12C	99	85.114	Sphenodon_punctatus
MGP_CAROLIEiJ_G0032210	Zc3h12c	100	92.316	ENSSSCG00000015014	ZC3H12C	100	92.614	Sus_scrofa
MGP_CAROLIEiJ_G0032210	Zc3h12c	72	86.562	ENSTGUG00000011244	ZC3H12C	100	86.562	Taeniopygia_guttata
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.466	ENSTTRG00000005096	ZC3H12C	100	92.466	Tursiops_truncatus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.808	ENSUAMG00000006051	ZC3H12C	99	92.717	Ursus_americanus
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	92.378	ENSUMAG00000007283	ZC3H12C	99	92.378	Ursus_maritimus
MGP_CAROLIEiJ_G0032210	Zc3h12c	88	90.560	ENSVPAG00000003110	ZC3H12C	88	90.560	Vicugna_pacos
MGP_CAROLIEiJ_G0032210	Zc3h12c	99	70.191	ENSXETG00000033837	ZC3H12C	99	70.776	Xenopus_tropicalis