EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
MGP_CAROLIEiJ_G0032280 (Gene tree)
Gene ID
110301272
Gene Symbol
Edc3
Alias
Lsm16|Yjdc
Full Name
enhancer of mRNA decapping 3
Gene Type
protein_coding
Species
Mus_caroli
Status
putative
Strand
Plus strand
Length
44529 bases
Position
chr9:54402434-54446962
Accession
110301272
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_CAROLIEiJ_P0088052FDFPF09532.102.7e-1711
MGP_CAROLIEiJ_P0088054LSM14PF12701.73.9e-1111
MGP_CAROLIEiJ_P0088052LSM14PF12701.71.2e-0911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_CAROLIEiJ_T0088054-442-MGP_CAROLIEiJ_P008805465 (aa)-UPI0001889E0A
MGP_CAROLIEiJ_T0088053-4304-MGP_CAROLIEiJ_P008805357 (aa)-UPI0001889E09
MGP_CAROLIEiJ_T0088052-5736-MGP_CAROLIEiJ_P0088052508 (aa)XP_021027326UPI000A31870F
Gene Model
Click here to download MGP_CAROLIEiJ_G0032280's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032280's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
MGP_CAROLIEiJ_G0032280Edc310098.462ENSG00000179151EDC310098.246Homo_sapiens
MGP_CAROLIEiJ_G0032280Edc310080.000ENSAPOG00000010791edc310068.959Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032280Edc310073.846ENSAPOG00000008655EDC310055.922Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSAMEG00000008963EDC310095.472Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032280Edc310078.947ENSACIG00000017751edc310068.566Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032280Edc310072.308ENSACIG00000005330EDC39959.922Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032280Edc310076.923ENSAOCG00000009103-10057.364Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032280Edc310080.000ENSAOCG00000005431edc310069.155Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032280Edc310080.000ENSAPEG00000000968edc310069.155Amphiprion_percula
MGP_CAROLIEiJ_G0032280Edc310076.923ENSAPEG00000007841EDC310057.364Amphiprion_percula
MGP_CAROLIEiJ_G0032280Edc310080.000ENSATEG00000015505edc310070.334Anabas_testudineus
MGP_CAROLIEiJ_G0032280Edc310075.385ENSATEG00000004205-10058.252Anabas_testudineus
MGP_CAROLIEiJ_G0032280Edc39086.813ENSAPLG00000008957EDC310086.154Anas_platyrhynchos
MGP_CAROLIEiJ_G0032280Edc310092.308ENSACAG00000000460-10086.650Anolis_carolinensis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSANAG00000024078EDC310096.260Aotus_nancymaae
MGP_CAROLIEiJ_G0032280Edc310078.947ENSACLG00000007232edc310068.173Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032280Edc310072.308ENSACLG00000018776-9958.398Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032280Edc310080.000ENSAMXG00000001589edc310070.980Astyanax_mexicanus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSBTAG00000007308EDC310095.079Bos_taurus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCJAG00000017681EDC310096.260Callithrix_jacchus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCAFG00000017935EDC310095.079Canis_familiaris
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCAFG00020003909EDC310095.079Canis_lupus_dingo
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCHIG00000023658EDC310095.669Capra_hircus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSTSYG00000004822EDC310095.669Carlito_syrichta
MGP_CAROLIEiJ_G0032280Edc39698.182ENSCAPG00000000377-10098.182Cavia_aperea
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCPOG00000015595EDC310094.488Cavia_porcellus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCCAG00000021663EDC310096.457Cebus_capucinus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCATG00000037511EDC310096.457Cercocebus_atys
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCLAG00000005700EDC310094.882Chinchilla_lanigera
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCSAG00000014239EDC310096.457Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSCPBG00000024239EDC310088.583Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032280Edc310038.077ENSCING00000022142-9937.885Ciona_intestinalis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSCANG00000028699EDC310096.457Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032280Edc3100100.000ENSCGRG00001013874Edc310098.228Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032280Edc3100100.000ENSCGRG00000011885Edc310098.228Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032280Edc310080.000ENSCSEG00000012996edc39968.701Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032280Edc310078.462ENSCVAG00000008023edc310068.566Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032280Edc310072.308ENSDARG00000051931edc39968.431Danio_rerio
MGP_CAROLIEiJ_G0032280Edc310098.462ENSDNOG00000030661EDC310084.109Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032280Edc39698.182ENSDORG00000025261-10098.182Dipodomys_ordii
MGP_CAROLIEiJ_G0032280Edc39596.296ENSETEG00000002398-6496.296Echinops_telfairi
MGP_CAROLIEiJ_G0032280Edc310098.462ENSEASG00005005071EDC310096.260Equus_asinus_asinus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSECAG00000017994EDC310096.260Equus_caballus
MGP_CAROLIEiJ_G0032280Edc310073.846ENSELUG00000007607EDC310062.035Esox_lucius
MGP_CAROLIEiJ_G0032280Edc310078.462ENSELUG00000005794edc310065.302Esox_lucius
MGP_CAROLIEiJ_G0032280Edc310096.923ENSFCAG00000002014EDC310095.276Felis_catus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSFALG00000004543EDC39684.369Ficedula_albicollis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSFDAG00000012582EDC310094.488Fukomys_damarensis
MGP_CAROLIEiJ_G0032280Edc310078.462ENSFHEG00000009375edc310068.959Fundulus_heteroclitus
MGP_CAROLIEiJ_G0032280Edc310080.000ENSGMOG00000002715edc310066.992Gadus_morhua
MGP_CAROLIEiJ_G0032280Edc310096.923ENSGALG00000040181EDC310087.795Gallus_gallus
MGP_CAROLIEiJ_G0032280Edc310078.462ENSGAFG00000014433edc310067.387Gambusia_affinis
MGP_CAROLIEiJ_G0032280Edc310076.923ENSGACG00000009783edc310068.173Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032280Edc310070.769ENSGACG00000014671EDC39956.140Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSGAGG00000023477EDC310087.598Gopherus_agassizii
MGP_CAROLIEiJ_G0032280Edc310098.462ENSGGOG00000003552EDC310096.063Gorilla_gorilla
MGP_CAROLIEiJ_G0032280Edc310078.947ENSHBUG00000003635edc310068.173Haplochromis_burtoni
MGP_CAROLIEiJ_G0032280Edc310072.308ENSHBUG00000020817EDC39957.895Haplochromis_burtoni
MGP_CAROLIEiJ_G0032280Edc39698.182ENSHGLG00000020876-10098.182Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032280Edc39696.364ENSHGLG00100019573-10096.364Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032280Edc310077.193ENSHCOG00000016834edc310067.515Hippocampus_comes
MGP_CAROLIEiJ_G0032280Edc310076.923ENSIPUG00000005695edc310069.745Ictalurus_punctatus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSSTOG00000013936EDC310096.260Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032280Edc310095.472ENSJJAG00000008074Edc310095.472Jaculus_jaculus
MGP_CAROLIEiJ_G0032280Edc310089.474ENSJJAG00000012800-9184.375Jaculus_jaculus
MGP_CAROLIEiJ_G0032280Edc310072.308ENSKMAG00000001987EDC310056.102Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032280Edc310080.000ENSKMAG00000001243edc310068.762Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032280Edc310072.308ENSLBEG00000017984EDC310056.893Labrus_bergylta
MGP_CAROLIEiJ_G0032280Edc310078.462ENSLBEG00000013435edc39968.173Labrus_bergylta
MGP_CAROLIEiJ_G0032280Edc310077.670ENSLACG00000014149EDC310077.670Latimeria_chalumnae
MGP_CAROLIEiJ_G0032280Edc310078.462ENSLOCG00000014625edc39967.641Lepisosteus_oculatus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSLAFG00000002992EDC310093.701Loxodonta_africana
MGP_CAROLIEiJ_G0032280Edc310098.462ENSMFAG00000043074EDC310096.260Macaca_fascicularis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSMMUG00000011071EDC310096.260Macaca_mulatta
MGP_CAROLIEiJ_G0032280Edc310098.462ENSMNEG00000035316EDC310096.260Macaca_nemestrina
MGP_CAROLIEiJ_G0032280Edc310098.462ENSMLEG00000030372EDC310096.457Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032280Edc310080.000ENSMAMG00000000505edc310069.352Mastacembelus_armatus
MGP_CAROLIEiJ_G0032280Edc310067.692ENSMAMG00000005423-9957.227Mastacembelus_armatus
MGP_CAROLIEiJ_G0032280Edc310078.947ENSMZEG00005004892edc310068.173Maylandia_zebra
MGP_CAROLIEiJ_G0032280Edc310072.308ENSMZEG00005005654EDC39958.398Maylandia_zebra
MGP_CAROLIEiJ_G0032280Edc310096.923ENSMGAG00000002617EDC310087.008Meleagris_gallopavo
MGP_CAROLIEiJ_G0032280Edc310096.923ENSMICG00000043190EDC310096.063Microcebus_murinus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSMOCG00000016205Edc310098.031Microtus_ochrogaster
MGP_CAROLIEiJ_G0032280Edc310078.462ENSMMOG00000012278edc39968.307Mola_mola
MGP_CAROLIEiJ_G0032280Edc310096.923ENSMODG00000009442EDC310091.732Monodelphis_domestica
MGP_CAROLIEiJ_G0032280Edc310078.462ENSMALG00000008658edc310069.745Monopterus_albus
MGP_CAROLIEiJ_G0032280Edc3100100.000ENSMUSG00000038957Edc3100100.000Mus_musculus
MGP_CAROLIEiJ_G0032280Edc3100100.000MGP_PahariEiJ_G0015146Edc3100100.000Mus_pahari
MGP_CAROLIEiJ_G0032280Edc3100100.000MGP_SPRETEiJ_G0033420Edc3100100.000Mus_spretus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSMPUG00000017293EDC310094.685Mustela_putorius_furo
MGP_CAROLIEiJ_G0032280Edc310096.923ENSMLUG00000016382EDC310095.098Myotis_lucifugus
MGP_CAROLIEiJ_G0032280Edc3100100.000ENSNGAG00000010923Edc310096.654Nannospalax_galili
MGP_CAROLIEiJ_G0032280Edc310078.947ENSNBRG00000002434edc310067.976Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032280Edc310072.308ENSNBRG00000007881EDC39958.594Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032280Edc310098.462ENSNLEG00000014577EDC310086.417Nomascus_leucogenys
MGP_CAROLIEiJ_G0032280Edc310096.923ENSMEUG00000009077EDC310089.961Notamacropus_eugenii
MGP_CAROLIEiJ_G0032280Edc39594.444ENSOPRG00000009540-7994.444Ochotona_princeps
MGP_CAROLIEiJ_G0032280Edc39698.182ENSODEG00000020214-10098.182Octodon_degus
MGP_CAROLIEiJ_G0032280Edc310072.308ENSONIG00000002932-9959.454Oreochromis_niloticus
MGP_CAROLIEiJ_G0032280Edc310078.947ENSONIG00000008434edc310068.369Oreochromis_niloticus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSOANG00000030799-9579.739Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0032280Edc310095.385ENSOCUG00000017740EDC38691.436Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032280Edc310070.769ENSORLG00000014399-9856.055Oryzias_latipes
MGP_CAROLIEiJ_G0032280Edc310076.923ENSORLG00000004883edc310067.780Oryzias_latipes
MGP_CAROLIEiJ_G0032280Edc310076.923ENSORLG00020012262edc310067.583Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032280Edc310070.769ENSORLG00020019446-10056.055Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032280Edc310072.308ENSORLG00015017635-9656.055Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032280Edc310076.923ENSORLG00015005634edc310067.780Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032280Edc310076.923ENSOMEG00000014026edc310068.173Oryzias_melastigma
MGP_CAROLIEiJ_G0032280Edc310070.769ENSOMEG00000017354EDC310055.469Oryzias_melastigma
MGP_CAROLIEiJ_G0032280Edc310098.462ENSOGAG00000014441EDC310096.457Otolemur_garnettii
MGP_CAROLIEiJ_G0032280Edc310098.462ENSOARG00000003476EDC310095.285Ovis_aries
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPPAG00000040143EDC310096.063Pan_paniscus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSPPRG00000006257EDC310095.079Panthera_pardus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSPTIG00000017424EDC310095.079Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPTRG00000007279EDC310096.063Pan_troglodytes
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPANG00000015997EDC310096.457Papio_anubis
MGP_CAROLIEiJ_G0032280Edc310080.702ENSPKIG00000004416edc310069.727Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032280Edc310066.602ENSPKIG00000019810EDC310066.602Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032280Edc310092.308ENSPSIG00000008474EDC310082.677Pelodiscus_sinensis
MGP_CAROLIEiJ_G0032280Edc310078.947ENSPMGG00000007223edc310066.732Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0032280Edc310097.047ENSPEMG00000015260Edc310097.047Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPCIG00000006276EDC37089.152Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032280Edc310078.462ENSPFOG00000012204edc310069.155Poecilia_formosa
MGP_CAROLIEiJ_G0032280Edc310078.462ENSPLAG00000014420edc310069.155Poecilia_latipinna
MGP_CAROLIEiJ_G0032280Edc310078.462ENSPMEG00000023289edc310069.155Poecilia_mexicana
MGP_CAROLIEiJ_G0032280Edc310078.462ENSPREG00000016022edc310069.155Poecilia_reticulata
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPPYG00000006642EDC310094.882Pongo_abelii
MGP_CAROLIEiJ_G0032280Edc39598.148ENSPCAG00000002802EDC38898.148Procavia_capensis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPCOG00000013364EDC310096.260Propithecus_coquereli
MGP_CAROLIEiJ_G0032280Edc310098.462ENSPVAG00000014733EDC310095.079Pteropus_vampyrus
MGP_CAROLIEiJ_G0032280Edc310078.947ENSPNYG00000021797edc310068.173Pundamilia_nyererei
MGP_CAROLIEiJ_G0032280Edc310072.308ENSPNYG00000009669EDC39957.895Pundamilia_nyererei
MGP_CAROLIEiJ_G0032280Edc310080.000ENSPNAG00000019657edc310070.233Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032280Edc39998.617ENSRNOG00000019579Edc310098.617Rattus_norvegicus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSRBIG00000019488EDC310096.063Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032280Edc310096.923ENSRROG00000034959EDC310096.063Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032280Edc310098.462ENSSBOG00000004896EDC310096.260Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSSHAG00000015075EDC39590.593Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032280Edc310080.000ENSSFOG00015002439edc39077.273Scleropages_formosus
MGP_CAROLIEiJ_G0032280Edc310078.462ENSSFOG00015016939edc310070.817Scleropages_formosus
MGP_CAROLIEiJ_G0032280Edc310076.923ENSSMAG00000010695edc310068.173Scophthalmus_maximus
MGP_CAROLIEiJ_G0032280Edc310070.769ENSSMAG00000010176-9956.556Scophthalmus_maximus
MGP_CAROLIEiJ_G0032280Edc310078.462ENSSDUG00000021844edc310068.369Seriola_dumerili
MGP_CAROLIEiJ_G0032280Edc310073.846ENSSDUG00000007671EDC38973.134Seriola_dumerili
MGP_CAROLIEiJ_G0032280Edc310078.947ENSSLDG00000008406-10078.947Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032280Edc310078.462ENSSLDG00000022046edc310068.369Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032280Edc310093.846ENSSARG00000003907EDC38096.774Sorex_araneus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSSPUG00000008232EDC310088.583Sphenodon_punctatus
MGP_CAROLIEiJ_G0032280Edc310080.000ENSSPAG00000010009edc310069.745Stegastes_partitus
MGP_CAROLIEiJ_G0032280Edc310073.846ENSSPAG00000020327EDC310058.171Stegastes_partitus
MGP_CAROLIEiJ_G0032280Edc310098.462ENSSSCG00000001903EDC310096.260Sus_scrofa
MGP_CAROLIEiJ_G0032280Edc310096.923ENSTGUG00000004007EDC310087.598Taeniopygia_guttata
MGP_CAROLIEiJ_G0032280Edc310076.923ENSTRUG00000017078edc310069.941Takifugu_rubripes
MGP_CAROLIEiJ_G0032280Edc310074.627ENSTNIG00000016047edc310067.515Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0032280Edc310098.462ENSTTRG00000007990EDC310095.276Tursiops_truncatus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSUAMG00000026710-10095.472Ursus_americanus
MGP_CAROLIEiJ_G0032280Edc39696.364ENSUAMG00000002788-10096.364Ursus_americanus
MGP_CAROLIEiJ_G0032280Edc310096.923ENSUMAG00000005006EDC39695.472Ursus_maritimus
MGP_CAROLIEiJ_G0032280Edc39585.185ENSVPAG00000003499-7985.185Vicugna_pacos
MGP_CAROLIEiJ_G0032280Edc310098.462ENSVVUG00000018601EDC310095.276Vulpes_vulpes
MGP_CAROLIEiJ_G0032280Edc36882.184ENSXETG00000010622edc39983.333Xenopus_tropicalis
MGP_CAROLIEiJ_G0032280Edc310078.462ENSXMAG00000007377edc310069.155Xiphophorus_maculatus

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