EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032314 (Gene tree)
Gene ID: 110302213
Gene Symbol: Larp6
Alias: 5430431G03Rik|Achn|acheron
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 18780 bases
Position: chr9:57899093-57917872
Accession: 110302213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0088198	La	PF05383.17	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0088198	-	2438	-	MGP_CAROLIEiJ_P0088198	491 (aa)	XP_021028688	UPI000A315C19

Gene Model

Click here to download MGP_CAROLIEiJ_G0032314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032314's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSG00000166173	LARP6	100	96.774	Homo_sapiens
MGP_CAROLIEiJ_G0032314	Larp6	95	57.113	ENSAPOG00000021773	larp6a	63	59.101	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032314	Larp6	87	92.290	ENSAMEG00000008897	LARP6	100	92.290	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032314	Larp6	97	57.606	ENSACIG00000005166	larp6a	93	56.187	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032314	Larp6	95	57.113	ENSAOCG00000002284	larp6a	63	59.101	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032314	Larp6	95	57.113	ENSAPEG00000008077	larp6a	84	59.101	Amphiprion_percula
MGP_CAROLIEiJ_G0032314	Larp6	95	56.907	ENSATEG00000004018	larp6a	62	58.202	Anabas_testudineus
MGP_CAROLIEiJ_G0032314	Larp6	86	71.158	ENSAPLG00000009914	LARP6	99	71.158	Anas_platyrhynchos
MGP_CAROLIEiJ_G0032314	Larp6	84	68.510	ENSACAG00000008613	LARP6	98	68.750	Anolis_carolinensis
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSANAG00000024860	LARP6	98	91.925	Aotus_nancymaae
MGP_CAROLIEiJ_G0032314	Larp6	97	57.404	ENSACLG00000018561	larp6a	66	55.984	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032314	Larp6	90	57.391	ENSAMXG00000029387	larp6a	68	57.987	Astyanax_mexicanus
MGP_CAROLIEiJ_G0032314	Larp6	85	41.014	ENSAMXG00000036816	-	93	41.546	Astyanax_mexicanus
MGP_CAROLIEiJ_G0032314	Larp6	100	89.431	ENSBTAG00000003915	LARP6	100	89.431	Bos_taurus
MGP_CAROLIEiJ_G0032314	Larp6	98	91.718	ENSCJAG00000018642	-	98	91.718	Callithrix_jacchus
MGP_CAROLIEiJ_G0032314	Larp6	98	91.304	ENSCJAG00000046236	-	98	91.304	Callithrix_jacchus
MGP_CAROLIEiJ_G0032314	Larp6	86	93.160	ENSCAFG00000017616	LARP6	99	93.160	Canis_familiaris
MGP_CAROLIEiJ_G0032314	Larp6	100	90.041	ENSCAFG00020007296	LARP6	100	90.041	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032314	Larp6	100	89.634	ENSCHIG00000013742	LARP6	100	89.634	Capra_hircus
MGP_CAROLIEiJ_G0032314	Larp6	86	92.217	ENSTSYG00000028124	LARP6	87	92.217	Carlito_syrichta
MGP_CAROLIEiJ_G0032314	Larp6	87	89.882	ENSCAPG00000015452	LARP6	100	89.882	Cavia_aperea
MGP_CAROLIEiJ_G0032314	Larp6	99	87.885	ENSCPOG00000022687	LARP6	99	87.885	Cavia_porcellus
MGP_CAROLIEiJ_G0032314	Larp6	98	91.511	ENSCCAG00000036320	LARP6	98	91.511	Cebus_capucinus
MGP_CAROLIEiJ_G0032314	Larp6	98	91.718	ENSCATG00000042432	LARP6	98	91.718	Cercocebus_atys
MGP_CAROLIEiJ_G0032314	Larp6	99	91.170	ENSCLAG00000007893	LARP6	99	91.170	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSCSAG00000013672	LARP6	98	91.925	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032314	Larp6	97	88.889	ENSCHOG00000003318	LARP6	99	88.889	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0032314	Larp6	89	70.252	ENSCPBG00000010771	LARP6	84	70.252	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032314	Larp6	86	93.632	ENSCANG00000025833	LARP6	99	93.853	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032314	Larp6	100	95.528	ENSCGRG00001024472	Larp6	100	95.528	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032314	Larp6	100	95.528	ENSCGRG00000004527	Larp6	100	95.528	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032314	Larp6	95	57.231	ENSCSEG00000011196	larp6a	65	57.658	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032314	Larp6	89	58.370	ENSCVAG00000009605	larp6a	66	58.370	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032314	Larp6	87	58.036	ENSDARG00000005355	larp6a	96	60.941	Danio_rerio
MGP_CAROLIEiJ_G0032314	Larp6	100	89.024	ENSDNOG00000042993	LARP6	100	89.024	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032314	Larp6	99	81.352	ENSDORG00000023910	Larp6	99	80.943	Dipodomys_ordii
MGP_CAROLIEiJ_G0032314	Larp6	77	90.400	ENSETEG00000020390	LARP6	76	88.446	Echinops_telfairi
MGP_CAROLIEiJ_G0032314	Larp6	100	91.260	ENSEASG00005005490	LARP6	73	91.260	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032314	Larp6	100	91.057	ENSECAG00000014190	LARP6	100	91.057	Equus_caballus
MGP_CAROLIEiJ_G0032314	Larp6	88	57.860	ENSELUG00000007341	larp6a	66	57.424	Esox_lucius
MGP_CAROLIEiJ_G0032314	Larp6	100	90.447	ENSFCAG00000001361	LARP6	100	90.447	Felis_catus
MGP_CAROLIEiJ_G0032314	Larp6	89	68.409	ENSFALG00000012389	LARP6	99	64.792	Ficedula_albicollis
MGP_CAROLIEiJ_G0032314	Larp6	95	86.510	ENSFDAG00000019994	LARP6	86	90.682	Fukomys_damarensis
MGP_CAROLIEiJ_G0032314	Larp6	89	58.370	ENSFHEG00000010312	larp6a	64	57.709	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0032314	Larp6	89	70.295	ENSGALG00000004046	LARP6	99	65.149	Gallus_gallus
MGP_CAROLIEiJ_G0032314	Larp6	89	58.811	ENSGAFG00000009426	larp6a	65	59.193	Gambusia_affinis
MGP_CAROLIEiJ_G0032314	Larp6	86	59.268	ENSGACG00000014622	larp6a	97	58.352	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032314	Larp6	81	70.707	ENSGAGG00000010802	LARP6	62	66.975	Gopherus_agassizii
MGP_CAROLIEiJ_G0032314	Larp6	86	93.868	ENSGGOG00000024151	LARP6	99	94.090	Gorilla_gorilla
MGP_CAROLIEiJ_G0032314	Larp6	97	57.404	ENSHBUG00000021014	larp6a	66	55.984	Haplochromis_burtoni
MGP_CAROLIEiJ_G0032314	Larp6	99	89.775	ENSHGLG00000015112	LARP6	99	89.775	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032314	Larp6	86	93.160	ENSHGLG00100013159	LARP6	99	93.160	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032314	Larp6	97	55.912	ENSHCOG00000001241	larp6a	91	55.711	Hippocampus_comes
MGP_CAROLIEiJ_G0032314	Larp6	85	38.152	ENSIPUG00000002828	-	94	38.443	Ictalurus_punctatus
MGP_CAROLIEiJ_G0032314	Larp6	86	59.326	ENSIPUG00000010187	larp6	65	60.277	Ictalurus_punctatus
MGP_CAROLIEiJ_G0032314	Larp6	94	92.191	ENSSTOG00000024279	LARP6	99	92.763	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032314	Larp6	99	89.506	ENSJJAG00000011013	Larp6	99	89.712	Jaculus_jaculus
MGP_CAROLIEiJ_G0032314	Larp6	89	59.430	ENSKMAG00000001702	larp6a	61	59.430	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032314	Larp6	95	55.236	ENSLBEG00000000170	larp6a	84	57.047	Labrus_bergylta
MGP_CAROLIEiJ_G0032314	Larp6	97	64.167	ENSLACG00000018706	LARP6	90	64.167	Latimeria_chalumnae
MGP_CAROLIEiJ_G0032314	Larp6	85	41.570	ENSLACG00000002786	-	98	43.059	Latimeria_chalumnae
MGP_CAROLIEiJ_G0032314	Larp6	85	45.561	ENSLOCG00000008547	-	82	43.692	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0032314	Larp6	96	59.627	ENSLOCG00000014592	larp6a	69	59.221	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0032314	Larp6	91	91.275	ENSLAFG00000016343	LARP6	100	91.275	Loxodonta_africana
MGP_CAROLIEiJ_G0032314	Larp6	92	93.778	ENSMFAG00000035507	LARP6	100	93.778	Macaca_fascicularis
MGP_CAROLIEiJ_G0032314	Larp6	97	91.158	ENSMMUG00000004429	LARP6	98	91.368	Macaca_mulatta
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSMNEG00000045335	LARP6	98	91.925	Macaca_nemestrina
MGP_CAROLIEiJ_G0032314	Larp6	86	93.632	ENSMLEG00000038587	LARP6	99	93.853	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032314	Larp6	95	57.084	ENSMAMG00000005261	larp6a	62	58.389	Mastacembelus_armatus
MGP_CAROLIEiJ_G0032314	Larp6	97	57.404	ENSMZEG00005005774	larp6a	66	55.984	Maylandia_zebra
MGP_CAROLIEiJ_G0032314	Larp6	85	71.564	ENSMGAG00000005077	LARP6	99	71.564	Meleagris_gallopavo
MGP_CAROLIEiJ_G0032314	Larp6	100	95.935	ENSMAUG00000018486	Larp6	100	95.935	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032314	Larp6	100	88.618	ENSMICG00000011234	LARP6	100	88.618	Microcebus_murinus
MGP_CAROLIEiJ_G0032314	Larp6	100	95.528	ENSMOCG00000010492	Larp6	100	95.528	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032314	Larp6	95	57.851	ENSMMOG00000016284	larp6a	85	59.009	Mola_mola
MGP_CAROLIEiJ_G0032314	Larp6	97	74.583	ENSMODG00000009034	LARP6	93	74.792	Monodelphis_domestica
MGP_CAROLIEiJ_G0032314	Larp6	95	57.084	ENSMALG00000014439	larp6a	84	58.389	Monopterus_albus
MGP_CAROLIEiJ_G0032314	Larp6	100	99.187	ENSMUSG00000034839	Larp6	100	99.187	Mus_musculus
MGP_CAROLIEiJ_G0032314	Larp6	100	97.967	MGP_PahariEiJ_G0015180	Larp6	100	97.967	Mus_pahari
MGP_CAROLIEiJ_G0032314	Larp6	100	98.780	MGP_SPRETEiJ_G0033452	Larp6	100	98.780	Mus_spretus
MGP_CAROLIEiJ_G0032314	Larp6	87	92.757	ENSMPUG00000017086	LARP6	100	92.757	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032314	Larp6	100	90.244	ENSMLUG00000010319	LARP6	100	90.244	Myotis_lucifugus
MGP_CAROLIEiJ_G0032314	Larp6	100	90.244	ENSNGAG00000014238	Larp6	100	90.244	Nannospalax_galili
MGP_CAROLIEiJ_G0032314	Larp6	97	57.404	ENSNBRG00000008120	larp6a	91	56.162	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032314	Larp6	98	91.718	ENSNLEG00000013691	LARP6	98	91.511	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032314	Larp6	85	74.859	ENSMEUG00000002270	LARP6	97	65.353	Notamacropus_eugenii
MGP_CAROLIEiJ_G0032314	Larp6	72	80.114	ENSOPRG00000004868	-	100	80.114	Ochotona_princeps
MGP_CAROLIEiJ_G0032314	Larp6	99	87.680	ENSODEG00000015958	LARP6	99	87.680	Octodon_degus
MGP_CAROLIEiJ_G0032314	Larp6	97	57.172	ENSONIG00000002901	larp6a	91	56.137	Oreochromis_niloticus
MGP_CAROLIEiJ_G0032314	Larp6	87	82.588	ENSOCUG00000009306	LARP6	100	82.588	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032314	Larp6	95	57.526	ENSORLG00000014256	larp6a	86	59.685	Oryzias_latipes
MGP_CAROLIEiJ_G0032314	Larp6	95	57.526	ENSORLG00020019657	larp6a	63	59.685	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032314	Larp6	95	57.526	ENSORLG00015017915	larp6a	63	59.685	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032314	Larp6	95	57.938	ENSOMEG00000017049	larp6a	63	60.135	Oryzias_melastigma
MGP_CAROLIEiJ_G0032314	Larp6	100	88.821	ENSOGAG00000000522	LARP6	100	88.821	Otolemur_garnettii
MGP_CAROLIEiJ_G0032314	Larp6	87	90.654	ENSOARG00000018750	LARP6	99	90.654	Ovis_aries
MGP_CAROLIEiJ_G0032314	Larp6	86	93.868	ENSPPAG00000031247	LARP6	99	94.090	Pan_paniscus
MGP_CAROLIEiJ_G0032314	Larp6	100	89.837	ENSPPRG00000011282	LARP6	100	89.837	Panthera_pardus
MGP_CAROLIEiJ_G0032314	Larp6	86	92.199	ENSPTIG00000015318	LARP6	86	92.199	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSPTRG00000007234	LARP6	98	91.925	Pan_troglodytes
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSPANG00000016362	LARP6	98	91.925	Papio_anubis
MGP_CAROLIEiJ_G0032314	Larp6	96	58.506	ENSPKIG00000020103	larp6a	89	57.676	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032314	Larp6	97	56.487	ENSPKIG00000004511	LARP6	71	55.489	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032314	Larp6	62	80.769	ENSPSIG00000009071	LARP6	91	74.783	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0032314	Larp6	95	57.732	ENSPMGG00000006958	larp6a	86	59.101	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0032314	Larp6	100	95.122	ENSPEMG00000012909	Larp6	100	95.122	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032314	Larp6	97	75.625	ENSPCIG00000020765	LARP6	93	75.833	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032314	Larp6	87	59.598	ENSPFOG00000014175	larp6a	84	59.598	Poecilia_formosa
MGP_CAROLIEiJ_G0032314	Larp6	87	59.641	ENSPLAG00000011105	larp6a	62	59.641	Poecilia_latipinna
MGP_CAROLIEiJ_G0032314	Larp6	87	59.417	ENSPMEG00000011085	larp6a	64	59.031	Poecilia_mexicana
MGP_CAROLIEiJ_G0032314	Larp6	96	57.407	ENSPREG00000008067	larp6a	64	58.811	Poecilia_reticulata
MGP_CAROLIEiJ_G0032314	Larp6	98	91.925	ENSPPYG00000006604	LARP6	98	91.925	Pongo_abelii
MGP_CAROLIEiJ_G0032314	Larp6	65	92.216	ENSPCAG00000014197	LARP6	76	92.216	Procavia_capensis
MGP_CAROLIEiJ_G0032314	Larp6	100	89.024	ENSPCOG00000022934	LARP6	100	89.024	Propithecus_coquereli
MGP_CAROLIEiJ_G0032314	Larp6	100	89.634	ENSPVAG00000005618	LARP6	100	89.634	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032314	Larp6	97	57.404	ENSPNYG00000009835	larp6a	91	56.162	Pundamilia_nyererei
MGP_CAROLIEiJ_G0032314	Larp6	98	55.622	ENSPNAG00000017966	larp6a	79	56.225	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032314	Larp6	100	96.341	ENSRNOG00000012438	Larp6	100	96.341	Rattus_norvegicus
MGP_CAROLIEiJ_G0032314	Larp6	98	89.278	ENSRBIG00000032902	LARP6	98	89.278	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032314	Larp6	98	91.718	ENSRROG00000043074	LARP6	98	91.718	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032314	Larp6	86	93.396	ENSSBOG00000024190	LARP6	99	93.396	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032314	Larp6	87	75.234	ENSSHAG00000018495	LARP6	100	75.234	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032314	Larp6	95	52.621	ENSSFOG00015002254	LARP6	83	56.064	Scleropages_formosus
MGP_CAROLIEiJ_G0032314	Larp6	86	60.780	ENSSFOG00015023268	larp6a	92	57.490	Scleropages_formosus
MGP_CAROLIEiJ_G0032314	Larp6	97	57.085	ENSSMAG00000009953	larp6a	63	58.370	Scophthalmus_maximus
MGP_CAROLIEiJ_G0032314	Larp6	95	57.613	ENSSDUG00000007438	larp6a	62	58.969	Seriola_dumerili
MGP_CAROLIEiJ_G0032314	Larp6	95	57.613	ENSSLDG00000016647	larp6a	62	58.969	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032314	Larp6	86	72.038	ENSSPUG00000011312	LARP6	99	72.038	Sphenodon_punctatus
MGP_CAROLIEiJ_G0032314	Larp6	95	57.113	ENSSPAG00000020502	larp6a	62	59.101	Stegastes_partitus
MGP_CAROLIEiJ_G0032314	Larp6	100	89.634	ENSSSCG00000004974	LARP6	100	89.634	Sus_scrofa
MGP_CAROLIEiJ_G0032314	Larp6	86	69.668	ENSTGUG00000005808	LARP6	99	69.668	Taeniopygia_guttata
MGP_CAROLIEiJ_G0032314	Larp6	97	56.855	ENSTRUG00000003151	larp6a	66	58.079	Takifugu_rubripes
MGP_CAROLIEiJ_G0032314	Larp6	95	56.341	ENSTNIG00000011926	larp6a	88	57.692	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0032314	Larp6	86	89.882	ENSTBEG00000015077	LARP6	100	89.882	Tupaia_belangeri
MGP_CAROLIEiJ_G0032314	Larp6	97	84.100	ENSUAMG00000010467	LARP6	87	91.163	Ursus_americanus
MGP_CAROLIEiJ_G0032314	Larp6	86	92.925	ENSVVUG00000015227	LARP6	94	92.925	Vulpes_vulpes
MGP_CAROLIEiJ_G0032314	Larp6	97	65.336	ENSXETG00000020340	larp6	93	65.966	Xenopus_tropicalis
MGP_CAROLIEiJ_G0032314	Larp6	87	59.417	ENSXCOG00000012654	larp6a	89	59.417	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0032314	Larp6	87	59.417	ENSXMAG00000021015	larp6a	60	59.417	Xiphophorus_maculatus