EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032370 (Gene tree)
Gene ID: 110301746
Gene Symbol: Trip4
Alias: 4930558E03Rik|ASC-1
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 83223 bases
Position: chr9:63026927-63110149
Accession: 110301746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0088385	ASCH	PF04266.14	3.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0088392	-	886	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0088393	-	684	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0088391	-	1559	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0088385	-	1746	-	MGP_CAROLIEiJ_P0088385	581 (aa)	XP_021028034	UPI000A316507
MGP_CAROLIEiJ_T0088394	-	560	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0088387	-	645	-	MGP_CAROLIEiJ_P0088387	56 (aa)	-	-
MGP_CAROLIEiJ_T0088386	-	502	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0032370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032370	Trip4	100	89.157	ENSG00000103671	TRIP4	100	89.157	Homo_sapiens
MGP_CAROLIEiJ_G0032370	Trip4	95	45.617	ENSAPOG00000023326	trip4	97	45.617	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032370	Trip4	100	85.542	ENSAMEG00000002591	TRIP4	100	85.542	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032370	Trip4	95	52.057	ENSACIG00000010577	trip4	97	52.057	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032370	Trip4	96	53.076	ENSAOCG00000000395	trip4	96	53.779	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032370	Trip4	97	57.785	ENSAPEG00000003621	trip4	99	58.478	Amphiprion_percula
MGP_CAROLIEiJ_G0032370	Trip4	97	58.176	ENSATEG00000019577	trip4	99	58.692	Anabas_testudineus
MGP_CAROLIEiJ_G0032370	Trip4	99	69.811	ENSAPLG00000004612	TRIP4	99	69.811	Anas_platyrhynchos
MGP_CAROLIEiJ_G0032370	Trip4	98	68.804	ENSACAG00000007077	TRIP4	90	68.804	Anolis_carolinensis
MGP_CAROLIEiJ_G0032370	Trip4	100	87.952	ENSANAG00000027612	TRIP4	100	87.952	Aotus_nancymaae
MGP_CAROLIEiJ_G0032370	Trip4	98	59.413	ENSACLG00000013819	trip4	99	60.348	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032370	Trip4	97	60.417	ENSAMXG00000007270	trip4	99	60.938	Astyanax_mexicanus
MGP_CAROLIEiJ_G0032370	Trip4	99	84.165	ENSBTAG00000014493	TRIP4	99	84.165	Bos_taurus
MGP_CAROLIEiJ_G0032370	Trip4	100	87.263	ENSCJAG00000005107	TRIP4	100	87.263	Callithrix_jacchus
MGP_CAROLIEiJ_G0032370	Trip4	100	85.542	ENSCAFG00000017091	TRIP4	100	85.542	Canis_familiaris
MGP_CAROLIEiJ_G0032370	Trip4	100	85.542	ENSCAFG00020008960	TRIP4	100	85.542	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032370	Trip4	97	83.630	ENSCHIG00000023818	TRIP4	98	83.630	Capra_hircus
MGP_CAROLIEiJ_G0032370	Trip4	100	87.608	ENSTSYG00000007185	TRIP4	100	87.608	Carlito_syrichta
MGP_CAROLIEiJ_G0032370	Trip4	70	83.929	ENSCAPG00000017624	TRIP4	92	75.685	Cavia_aperea
MGP_CAROLIEiJ_G0032370	Trip4	100	87.091	ENSCPOG00000006483	TRIP4	100	87.091	Cavia_porcellus
MGP_CAROLIEiJ_G0032370	Trip4	100	82.444	ENSCCAG00000026483	TRIP4	100	82.444	Cebus_capucinus
MGP_CAROLIEiJ_G0032370	Trip4	100	89.157	ENSCATG00000041144	TRIP4	100	89.157	Cercocebus_atys
MGP_CAROLIEiJ_G0032370	Trip4	100	87.952	ENSCLAG00000006872	TRIP4	100	87.952	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032370	Trip4	100	88.985	ENSCSAG00000012499	TRIP4	100	88.985	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032370	Trip4	82	75.758	ENSCHOG00000010776	TRIP4	82	75.758	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0032370	Trip4	97	68.486	ENSCPBG00000006093	TRIP4	99	68.486	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032370	Trip4	99	41.556	ENSCSAVG00000005293	-	99	41.556	Ciona_savignyi
MGP_CAROLIEiJ_G0032370	Trip4	100	85.542	ENSCANG00000033593	TRIP4	100	85.542	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032370	Trip4	100	94.492	ENSCGRG00001021158	Trip4	100	94.492	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032370	Trip4	91	92.143	ENSCGRG00000002340	Trip4	100	92.143	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032370	Trip4	97	58.103	ENSCSEG00000009015	trip4	98	58.276	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032370	Trip4	89	57.955	ENSCVAG00000021094	-	90	57.955	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032370	Trip4	90	58.287	ENSCVAG00000020984	trip4	99	58.287	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032370	Trip4	97	59.511	ENSDARG00000098074	trip4	99	60.035	Danio_rerio
MGP_CAROLIEiJ_G0032370	Trip4	100	85.026	ENSDNOG00000008654	TRIP4	100	85.026	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032370	Trip4	100	89.501	ENSDORG00000014914	Trip4	100	89.501	Dipodomys_ordii
MGP_CAROLIEiJ_G0032370	Trip4	87	36.434	FBgn0031115	CG11710	93	36.434	Drosophila_melanogaster
MGP_CAROLIEiJ_G0032370	Trip4	100	80.717	ENSETEG00000001597	TRIP4	100	80.717	Echinops_telfairi
MGP_CAROLIEiJ_G0032370	Trip4	97	47.818	ENSEBUG00000009039	trip4	98	47.909	Eptatretus_burgeri
MGP_CAROLIEiJ_G0032370	Trip4	100	86.575	ENSEASG00005006538	TRIP4	100	86.575	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032370	Trip4	93	84.007	ENSECAG00000024689	TRIP4	99	84.007	Equus_caballus
MGP_CAROLIEiJ_G0032370	Trip4	80	83.770	ENSEEUG00000007741	TRIP4	80	83.770	Erinaceus_europaeus
MGP_CAROLIEiJ_G0032370	Trip4	98	56.186	ENSELUG00000022449	trip4	99	56.186	Esox_lucius
MGP_CAROLIEiJ_G0032370	Trip4	100	86.231	ENSFCAG00000010618	TRIP4	100	86.231	Felis_catus
MGP_CAROLIEiJ_G0032370	Trip4	99	67.925	ENSFALG00000009816	TRIP4	99	68.096	Ficedula_albicollis
MGP_CAROLIEiJ_G0032370	Trip4	100	87.091	ENSFDAG00000017051	TRIP4	100	87.091	Fukomys_damarensis
MGP_CAROLIEiJ_G0032370	Trip4	97	58.864	ENSFHEG00000015795	trip4	99	58.864	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0032370	Trip4	97	57.391	ENSGMOG00000008455	trip4	99	57.391	Gadus_morhua
MGP_CAROLIEiJ_G0032370	Trip4	99	69.707	ENSGALG00000030672	TRIP4	99	69.707	Gallus_gallus
MGP_CAROLIEiJ_G0032370	Trip4	97	58.997	ENSGAFG00000003491	trip4	99	58.997	Gambusia_affinis
MGP_CAROLIEiJ_G0032370	Trip4	98	57.414	ENSGACG00000016986	trip4	99	57.095	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032370	Trip4	81	70.502	ENSGAGG00000003671	TRIP4	85	70.502	Gopherus_agassizii
MGP_CAROLIEiJ_G0032370	Trip4	100	88.985	ENSGGOG00000022608	TRIP4	100	88.985	Gorilla_gorilla
MGP_CAROLIEiJ_G0032370	Trip4	98	59.413	ENSHBUG00000021071	trip4	99	60.348	Haplochromis_burtoni
MGP_CAROLIEiJ_G0032370	Trip4	100	87.608	ENSHGLG00000009286	TRIP4	100	87.608	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032370	Trip4	100	87.435	ENSHGLG00100017760	TRIP4	100	87.435	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032370	Trip4	97	58.160	ENSHCOG00000017904	trip4	98	58.681	Hippocampus_comes
MGP_CAROLIEiJ_G0032370	Trip4	98	58.997	ENSIPUG00000013205	trip4	99	59.689	Ictalurus_punctatus
MGP_CAROLIEiJ_G0032370	Trip4	100	88.296	ENSSTOG00000014228	TRIP4	100	88.296	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032370	Trip4	97	80.570	ENSJJAG00000001629	Trip4	99	80.570	Jaculus_jaculus
MGP_CAROLIEiJ_G0032370	Trip4	97	60.938	ENSKMAG00000001297	trip4	99	60.938	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032370	Trip4	98	57.439	ENSLBEG00000018354	trip4	99	58.319	Labrus_bergylta
MGP_CAROLIEiJ_G0032370	Trip4	98	62.931	ENSLACG00000014856	TRIP4	99	62.842	Latimeria_chalumnae
MGP_CAROLIEiJ_G0032370	Trip4	98	62.718	ENSLOCG00000014993	trip4	99	62.718	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0032370	Trip4	100	85.198	ENSLAFG00000017612	TRIP4	100	85.198	Loxodonta_africana
MGP_CAROLIEiJ_G0032370	Trip4	100	88.812	ENSMFAG00000036568	TRIP4	100	88.812	Macaca_fascicularis
MGP_CAROLIEiJ_G0032370	Trip4	100	88.812	ENSMMUG00000009882	TRIP4	100	88.812	Macaca_mulatta
MGP_CAROLIEiJ_G0032370	Trip4	100	88.985	ENSMNEG00000033592	TRIP4	100	88.985	Macaca_nemestrina
MGP_CAROLIEiJ_G0032370	Trip4	100	88.812	ENSMLEG00000027911	TRIP4	100	88.812	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032370	Trip4	97	57.976	ENSMAMG00000013374	trip4	99	57.976	Mastacembelus_armatus
MGP_CAROLIEiJ_G0032370	Trip4	98	59.413	ENSMZEG00005013450	trip4	99	60.348	Maylandia_zebra
MGP_CAROLIEiJ_G0032370	Trip4	100	89.157	ENSMICG00000008679	TRIP4	100	89.157	Microcebus_murinus
MGP_CAROLIEiJ_G0032370	Trip4	100	94.148	ENSMOCG00000012669	Trip4	100	94.148	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032370	Trip4	95	57.651	ENSMMOG00000002315	trip4	98	58.185	Mola_mola
MGP_CAROLIEiJ_G0032370	Trip4	100	78.694	ENSMODG00000010743	TRIP4	91	78.694	Monodelphis_domestica
MGP_CAROLIEiJ_G0032370	Trip4	100	98.451	ENSMUSG00000032386	Trip4	100	98.451	Mus_musculus
MGP_CAROLIEiJ_G0032370	Trip4	100	97.762	MGP_PahariEiJ_G0015235	Trip4	100	97.762	Mus_pahari
MGP_CAROLIEiJ_G0032370	Trip4	100	98.795	MGP_SPRETEiJ_G0033509	Trip4	100	98.795	Mus_spretus
MGP_CAROLIEiJ_G0032370	Trip4	100	85.542	ENSMPUG00000000568	TRIP4	100	85.542	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032370	Trip4	95	85.455	ENSMLUG00000013367	TRIP4	100	85.455	Myotis_lucifugus
MGP_CAROLIEiJ_G0032370	Trip4	100	91.252	ENSNGAG00000019566	Trip4	100	91.252	Nannospalax_galili
MGP_CAROLIEiJ_G0032370	Trip4	96	58.730	ENSNBRG00000020663	trip4	97	59.612	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032370	Trip4	100	88.812	ENSNLEG00000012455	TRIP4	100	88.812	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032370	Trip4	72	73.333	ENSMEUG00000005886	TRIP4	86	73.333	Notamacropus_eugenii
MGP_CAROLIEiJ_G0032370	Trip4	100	82.616	ENSOPRG00000009512	TRIP4	100	82.616	Ochotona_princeps
MGP_CAROLIEiJ_G0032370	Trip4	100	86.575	ENSODEG00000016494	TRIP4	100	86.575	Octodon_degus
MGP_CAROLIEiJ_G0032370	Trip4	89	58.745	ENSONIG00000005703	trip4	98	58.745	Oreochromis_niloticus
MGP_CAROLIEiJ_G0032370	Trip4	98	77.233	ENSOANG00000013357	TRIP4	96	77.233	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0032370	Trip4	100	87.952	ENSOCUG00000002322	TRIP4	100	87.952	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032370	Trip4	97	56.920	ENSORLG00000001710	trip4	99	57.612	Oryzias_latipes
MGP_CAROLIEiJ_G0032370	Trip4	97	57.414	ENSORLG00020022346	trip4	99	58.103	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032370	Trip4	97	57.241	ENSORLG00015022509	trip4	99	57.931	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032370	Trip4	97	59.689	ENSOMEG00000007655	trip4	99	60.381	Oryzias_melastigma
MGP_CAROLIEiJ_G0032370	Trip4	100	79.074	ENSOGAG00000012427	TRIP4	100	79.074	Otolemur_garnettii
MGP_CAROLIEiJ_G0032370	Trip4	99	84.165	ENSOARG00000020739	TRIP4	99	84.165	Ovis_aries
MGP_CAROLIEiJ_G0032370	Trip4	100	88.985	ENSPPAG00000017953	TRIP4	100	88.985	Pan_paniscus
MGP_CAROLIEiJ_G0032370	Trip4	100	85.886	ENSPPRG00000013668	TRIP4	100	85.886	Panthera_pardus
MGP_CAROLIEiJ_G0032370	Trip4	100	86.059	ENSPTIG00000014502	TRIP4	100	86.059	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032370	Trip4	100	80.895	ENSPTRG00000007160	TRIP4	100	80.895	Pan_troglodytes
MGP_CAROLIEiJ_G0032370	Trip4	100	89.157	ENSPANG00000016750	TRIP4	100	89.157	Papio_anubis
MGP_CAROLIEiJ_G0032370	Trip4	89	57.467	ENSPKIG00000009253	trip4	99	57.467	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032370	Trip4	98	58.895	ENSPKIG00000022978	-	99	58.895	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032370	Trip4	94	69.369	ENSPSIG00000012082	TRIP4	98	69.369	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0032370	Trip4	98	54.514	ENSPMGG00000019015	trip4	98	54.688	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0032370	Trip4	100	90.534	ENSPEMG00000012446	Trip4	100	90.534	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032370	Trip4	100	77.320	ENSPCIG00000029450	TRIP4	95	77.320	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032370	Trip4	97	58.304	ENSPFOG00000014732	trip4	99	58.304	Poecilia_formosa
MGP_CAROLIEiJ_G0032370	Trip4	97	58.448	ENSPLAG00000013794	trip4	99	58.448	Poecilia_latipinna
MGP_CAROLIEiJ_G0032370	Trip4	97	58.478	ENSPMEG00000001331	trip4	99	58.478	Poecilia_mexicana
MGP_CAROLIEiJ_G0032370	Trip4	97	57.612	ENSPREG00000006576	trip4	99	57.612	Poecilia_reticulata
MGP_CAROLIEiJ_G0032370	Trip4	100	88.812	ENSPPYG00000006550	TRIP4	100	88.812	Pongo_abelii
MGP_CAROLIEiJ_G0032370	Trip4	98	73.860	ENSPCAG00000016310	TRIP4	100	73.666	Procavia_capensis
MGP_CAROLIEiJ_G0032370	Trip4	100	73.024	ENSPCOG00000013484	TRIP4	100	73.024	Propithecus_coquereli
MGP_CAROLIEiJ_G0032370	Trip4	96	75.492	ENSPVAG00000016613	TRIP4	100	75.492	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032370	Trip4	98	56.174	ENSPNYG00000011318	trip4	98	56.174	Pundamilia_nyererei
MGP_CAROLIEiJ_G0032370	Trip4	98	59.549	ENSPNAG00000020884	trip4	99	60.243	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032370	Trip4	100	94.664	ENSRNOG00000016121	Trip4	100	94.664	Rattus_norvegicus
MGP_CAROLIEiJ_G0032370	Trip4	88	90.133	ENSRBIG00000038027	TRIP4	100	90.133	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032370	Trip4	100	89.157	ENSRROG00000030525	TRIP4	100	89.157	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032370	Trip4	100	76.076	ENSSBOG00000020516	TRIP4	100	77.015	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032370	Trip4	94	79.015	ENSSHAG00000000040	TRIP4	100	79.015	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032370	Trip4	97	59.965	ENSSFOG00015000143	trip4	98	60.354	Scleropages_formosus
MGP_CAROLIEiJ_G0032370	Trip4	97	57.886	ENSSMAG00000010539	trip4	99	57.886	Scophthalmus_maximus
MGP_CAROLIEiJ_G0032370	Trip4	97	57.143	ENSSDUG00000000225	trip4	99	58.003	Seriola_dumerili
MGP_CAROLIEiJ_G0032370	Trip4	97	57.315	ENSSLDG00000000215	trip4	99	57.831	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032370	Trip4	83	84.483	ENSSARG00000003710	TRIP4	83	84.483	Sorex_araneus
MGP_CAROLIEiJ_G0032370	Trip4	96	61.290	ENSSPUG00000004511	TRIP4	98	62.075	Sphenodon_punctatus
MGP_CAROLIEiJ_G0032370	Trip4	97	57.850	ENSSPAG00000008520	trip4	99	57.850	Stegastes_partitus
MGP_CAROLIEiJ_G0032370	Trip4	100	86.059	ENSSSCG00000004552	TRIP4	100	86.133	Sus_scrofa
MGP_CAROLIEiJ_G0032370	Trip4	98	68.706	ENSTGUG00000004673	TRIP4	100	68.706	Taeniopygia_guttata
MGP_CAROLIEiJ_G0032370	Trip4	97	56.477	ENSTRUG00000016488	trip4	99	56.995	Takifugu_rubripes
MGP_CAROLIEiJ_G0032370	Trip4	98	57.021	ENSTNIG00000009582	trip4	98	57.021	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0032370	Trip4	94	88.321	ENSTBEG00000015881	TRIP4	100	88.321	Tupaia_belangeri
MGP_CAROLIEiJ_G0032370	Trip4	89	89.062	ENSTTRG00000009674	TRIP4	89	89.062	Tursiops_truncatus
MGP_CAROLIEiJ_G0032370	Trip4	100	85.542	ENSUMAG00000012640	TRIP4	100	85.542	Ursus_maritimus
MGP_CAROLIEiJ_G0032370	Trip4	100	82.100	ENSVPAG00000010808	TRIP4	100	82.100	Vicugna_pacos
MGP_CAROLIEiJ_G0032370	Trip4	100	85.886	ENSVVUG00000013776	TRIP4	100	85.886	Vulpes_vulpes
MGP_CAROLIEiJ_G0032370	Trip4	97	59.689	ENSXETG00000010649	trip4	97	59.689	Xenopus_tropicalis
MGP_CAROLIEiJ_G0032370	Trip4	97	58.478	ENSXMAG00000000526	trip4	99	59.170	Xiphophorus_maculatus