EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032404 (Gene tree)
Gene ID: 110301334
Gene Symbol: Sltm
Alias: 5730455C01Rik|5730555F13Rik|9130215G10Rik
Full Name: SAFB like transcription modulator
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 48050 bases
Position: chr9:67714538-67762587
Accession: 110301334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0088536	RRM_5	PF13893.6	8.8e-08	1	1
MGP_CAROLIEiJ_P0088536	RRM_1	PF00076.22	2e-10	1	1
MGP_CAROLIEiJ_P0088536	SAP	PF02037.27	6.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0088536	-	3647	XM_021171770	MGP_CAROLIEiJ_P0088536	1031 (aa)	XP_021027429	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0032404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0032404	Sltm	52	44.144	MGP_CAROLIEiJ_G0021779	Safb2	57	39.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032404	Sltm	98	90.855	ENSG00000137776	SLTM	100	91.000	Homo_sapiens
MGP_CAROLIEiJ_G0032404	Sltm	95	89.297	ENSAMEG00000004537	SLTM	59	89.965	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032404	Sltm	99	47.717	ENSACIG00000001971	sltm	99	47.749	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032404	Sltm	83	49.526	ENSATEG00000003763	sltm	59	45.666	Anabas_testudineus
MGP_CAROLIEiJ_G0032404	Sltm	95	75.862	ENSAPLG00000013025	SLTM	59	74.872	Anas_platyrhynchos
MGP_CAROLIEiJ_G0032404	Sltm	98	69.894	ENSACAG00000015120	SLTM	59	67.353	Anolis_carolinensis
MGP_CAROLIEiJ_G0032404	Sltm	98	89.971	ENSANAG00000037031	SLTM	63	89.744	Aotus_nancymaae
MGP_CAROLIEiJ_G0032404	Sltm	83	49.473	ENSACLG00000002523	sltm	99	49.532	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032404	Sltm	90	88.614	ENSBTAG00000011319	SLTM	55	89.773	Bos_taurus
MGP_CAROLIEiJ_G0032404	Sltm	98	89.381	ENSCJAG00000020395	SLTM	63	89.744	Callithrix_jacchus
MGP_CAROLIEiJ_G0032404	Sltm	99	86.791	ENSCAFG00000016586	SLTM	59	87.662	Canis_familiaris
MGP_CAROLIEiJ_G0032404	Sltm	98	87.917	ENSCAFG00020011253	SLTM	95	89.286	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032404	Sltm	98	88.496	ENSCHIG00000008780	SLTM	59	89.286	Capra_hircus
MGP_CAROLIEiJ_G0032404	Sltm	95	90.000	ENSTSYG00000013581	SLTM	56	90.815	Carlito_syrichta
MGP_CAROLIEiJ_G0032404	Sltm	88	89.332	ENSCPOG00000026109	SLTM	67	89.431	Cavia_porcellus
MGP_CAROLIEiJ_G0032404	Sltm	98	90.265	ENSCCAG00000022982	SLTM	63	89.744	Cebus_capucinus
MGP_CAROLIEiJ_G0032404	Sltm	98	90.757	ENSCATG00000030254	SLTM	63	89.744	Cercocebus_atys
MGP_CAROLIEiJ_G0032404	Sltm	91	86.123	ENSCLAG00000007160	SLTM	61	87.348	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032404	Sltm	98	90.659	ENSCSAG00000012004	SLTM	60	91.396	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032404	Sltm	99	78.102	ENSCPBG00000006045	SLTM	58	76.329	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032404	Sltm	95	90.714	ENSCANG00000043731	SLTM	59	91.334	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032404	Sltm	95	46.792	ENSCSEG00000001618	sltm	58	43.887	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032404	Sltm	78	54.137	ENSDARG00000052728	sltm	91	62.302	Danio_rerio
MGP_CAROLIEiJ_G0032404	Sltm	99	88.356	ENSDNOG00000002975	SLTM	59	89.610	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032404	Sltm	76	90.068	ENSDORG00000007463	Sltm	85	90.112	Dipodomys_ordii
MGP_CAROLIEiJ_G0032404	Sltm	55	89.667	ENSETEG00000008003	SLTM	59	89.081	Echinops_telfairi
MGP_CAROLIEiJ_G0032404	Sltm	98	90.345	ENSEASG00005006792	SLTM	60	91.883	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032404	Sltm	98	90.443	ENSECAG00000011267	SLTM	60	92.045	Equus_caballus
MGP_CAROLIEiJ_G0032404	Sltm	86	87.160	ENSEEUG00000000580	SLTM	73	87.160	Erinaceus_europaeus
MGP_CAROLIEiJ_G0032404	Sltm	99	47.873	ENSELUG00000013388	sltm	92	48.246	Esox_lucius
MGP_CAROLIEiJ_G0032404	Sltm	98	90.462	ENSFCAG00000004826	SLTM	63	92.308	Felis_catus
MGP_CAROLIEiJ_G0032404	Sltm	95	75.761	ENSFALG00000012285	SLTM	59	73.756	Ficedula_albicollis
MGP_CAROLIEiJ_G0032404	Sltm	95	87.857	ENSFDAG00000018075	SLTM	59	89.601	Fukomys_damarensis
MGP_CAROLIEiJ_G0032404	Sltm	100	48.633	ENSGACG00000015814	sltm	59	45.659	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032404	Sltm	88	88.764	ENSGAGG00000021279	SLTM	55	84.694	Gopherus_agassizii
MGP_CAROLIEiJ_G0032404	Sltm	98	90.855	ENSGGOG00000015866	SLTM	68	89.744	Gorilla_gorilla
MGP_CAROLIEiJ_G0032404	Sltm	83	49.367	ENSHBUG00000012461	sltm	99	49.345	Haplochromis_burtoni
MGP_CAROLIEiJ_G0032404	Sltm	99	72.201	ENSHGLG00000015426	-	61	81.107	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032404	Sltm	100	86.957	ENSHGLG00000018512	-	60	89.106	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032404	Sltm	100	81.335	ENSHGLG00100002674	-	61	86.341	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032404	Sltm	99	74.637	ENSHGLG00100001757	-	62	80.906	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032404	Sltm	99	71.623	ENSHGLG00100002576	-	61	75.980	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032404	Sltm	95	89.898	ENSSTOG00000000584	SLTM	59	90.815	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032404	Sltm	99	86.634	ENSJJAG00000006970	Sltm	58	85.065	Jaculus_jaculus
MGP_CAROLIEiJ_G0032404	Sltm	99	44.557	ENSKMAG00000007570	sltm	61	42.178	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032404	Sltm	83	48.056	ENSLBEG00000025472	sltm	52	47.732	Labrus_bergylta
MGP_CAROLIEiJ_G0032404	Sltm	98	86.922	ENSLAFG00000017922	SLTM	81	91.289	Loxodonta_africana
MGP_CAROLIEiJ_G0032404	Sltm	98	90.757	ENSMFAG00000033354	SLTM	63	89.744	Macaca_fascicularis
MGP_CAROLIEiJ_G0032404	Sltm	98	90.757	ENSMMUG00000022200	SLTM	92	91.667	Macaca_mulatta
MGP_CAROLIEiJ_G0032404	Sltm	98	90.659	ENSMNEG00000025105	SLTM	60	91.234	Macaca_nemestrina
MGP_CAROLIEiJ_G0032404	Sltm	98	90.560	ENSMLEG00000043355	SLTM	63	89.744	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032404	Sltm	99	48.590	ENSMAMG00000021391	sltm	51	45.631	Mastacembelus_armatus
MGP_CAROLIEiJ_G0032404	Sltm	83	49.473	ENSMZEG00005013839	sltm	99	49.532	Maylandia_zebra
MGP_CAROLIEiJ_G0032404	Sltm	96	72.718	ENSMGAG00000005313	SLTM	60	71.212	Meleagris_gallopavo
MGP_CAROLIEiJ_G0032404	Sltm	98	90.069	ENSMICG00000013069	SLTM	63	89.744	Microcebus_murinus
MGP_CAROLIEiJ_G0032404	Sltm	99	49.016	ENSMALG00000021474	sltm	51	46.257	Monopterus_albus
MGP_CAROLIEiJ_G0032404	Sltm	100	98.933	ENSMUSG00000032212	Sltm	100	98.933	Mus_musculus
MGP_CAROLIEiJ_G0032404	Sltm	100	98.351	MGP_PahariEiJ_G0015268	Sltm	100	98.351	Mus_pahari
MGP_CAROLIEiJ_G0032404	Sltm	100	98.836	MGP_SPRETEiJ_G0033542	Sltm	100	98.836	Mus_spretus
MGP_CAROLIEiJ_G0032404	Sltm	97	86.969	ENSMPUG00000004229	SLTM	57	88.027	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032404	Sltm	95	87.398	ENSMLUG00000000742	SLTM	59	89.428	Myotis_lucifugus
MGP_CAROLIEiJ_G0032404	Sltm	81	49.011	ENSNBRG00000010183	sltm	91	49.506	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032404	Sltm	98	90.570	ENSNLEG00000011440	SLTM	60	91.057	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032404	Sltm	99	70.059	ENSMEUG00000015230	SLTM	60	67.690	Notamacropus_eugenii
MGP_CAROLIEiJ_G0032404	Sltm	95	85.381	ENSODEG00000017077	SLTM	59	88.103	Octodon_degus
MGP_CAROLIEiJ_G0032404	Sltm	100	49.160	ENSONIG00000005838	sltm	99	48.735	Oreochromis_niloticus
MGP_CAROLIEiJ_G0032404	Sltm	75	90.103	ENSOCUG00000003327	SLTM	65	90.186	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032404	Sltm	83	44.805	ENSORLG00000008161	sltm	99	42.571	Oryzias_latipes
MGP_CAROLIEiJ_G0032404	Sltm	98	44.508	ENSORLG00020008903	sltm	99	42.912	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032404	Sltm	83	44.805	ENSORLG00015007103	sltm	99	43.007	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032404	Sltm	81	46.733	ENSOMEG00000002041	sltm	98	46.262	Oryzias_melastigma
MGP_CAROLIEiJ_G0032404	Sltm	98	89.282	ENSOGAG00000011297	SLTM	60	90.422	Otolemur_garnettii
MGP_CAROLIEiJ_G0032404	Sltm	100	87.911	ENSOARG00000020844	SLTM	60	89.123	Ovis_aries
MGP_CAROLIEiJ_G0032404	Sltm	98	88.987	ENSPPAG00000029308	SLTM	63	89.744	Pan_paniscus
MGP_CAROLIEiJ_G0032404	Sltm	98	89.971	ENSPPRG00000012400	SLTM	63	92.308	Panthera_pardus
MGP_CAROLIEiJ_G0032404	Sltm	95	90.000	ENSPTIG00000021933	SLTM	56	91.161	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032404	Sltm	98	90.855	ENSPTRG00000007121	SLTM	63	89.744	Pan_troglodytes
MGP_CAROLIEiJ_G0032404	Sltm	98	88.616	ENSPANG00000017193	SLTM	63	89.744	Papio_anubis
MGP_CAROLIEiJ_G0032404	Sltm	99	75.953	ENSPSIG00000005489	SLTM	60	76.490	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0032404	Sltm	99	81.232	ENSPCIG00000028356	SLTM	98	80.192	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032404	Sltm	99	44.966	ENSPFOG00000004372	sltm	91	45.742	Poecilia_formosa
MGP_CAROLIEiJ_G0032404	Sltm	82	44.469	ENSPLAG00000008000	sltm	91	45.861	Poecilia_latipinna
MGP_CAROLIEiJ_G0032404	Sltm	82	44.252	ENSPMEG00000006047	sltm	90	45.643	Poecilia_mexicana
MGP_CAROLIEiJ_G0032404	Sltm	82	45.435	ENSPREG00000023236	sltm	91	46.681	Poecilia_reticulata
MGP_CAROLIEiJ_G0032404	Sltm	98	89.282	ENSPPYG00000006515	SLTM	60	88.799	Pongo_abelii
MGP_CAROLIEiJ_G0032404	Sltm	100	76.522	ENSPCAG00000013482	SLTM	90	78.594	Procavia_capensis
MGP_CAROLIEiJ_G0032404	Sltm	98	89.577	ENSPCOG00000010624	SLTM	63	92.308	Propithecus_coquereli
MGP_CAROLIEiJ_G0032404	Sltm	98	87.119	ENSPVAG00000015056	SLTM	60	86.688	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032404	Sltm	83	49.367	ENSPNYG00000013893	sltm	99	49.345	Pundamilia_nyererei
MGP_CAROLIEiJ_G0032404	Sltm	78	56.228	ENSPNAG00000020563	sltm	58	48.200	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032404	Sltm	95	90.714	ENSRBIG00000029226	SLTM	59	91.334	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032404	Sltm	98	90.659	ENSRROG00000045301	SLTM	63	89.744	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032404	Sltm	98	90.265	ENSSBOG00000018883	SLTM	63	89.744	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032404	Sltm	95	79.858	ENSSHAG00000015395	SLTM	58	78.485	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032404	Sltm	99	48.324	ENSSMAG00000000355	sltm	60	42.924	Scophthalmus_maximus
MGP_CAROLIEiJ_G0032404	Sltm	83	50.156	ENSSDUG00000018134	sltm	60	45.171	Seriola_dumerili
MGP_CAROLIEiJ_G0032404	Sltm	83	50.156	ENSSLDG00000013907	sltm	60	44.860	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032404	Sltm	98	87.709	ENSSSCG00000004592	SLTM	95	90.747	Sus_scrofa
MGP_CAROLIEiJ_G0032404	Sltm	92	74.633	ENSTGUG00000006017	SLTM	57	73.091	Taeniopygia_guttata
MGP_CAROLIEiJ_G0032404	Sltm	95	83.776	ENSTBEG00000000945	SLTM	59	82.669	Tupaia_belangeri
MGP_CAROLIEiJ_G0032404	Sltm	100	89.555	ENSTTRG00000005246	SLTM	60	90.909	Tursiops_truncatus
MGP_CAROLIEiJ_G0032404	Sltm	78	89.950	ENSUAMG00000025901	SLTM	50	91.315	Ursus_americanus
MGP_CAROLIEiJ_G0032404	Sltm	96	87.726	ENSUMAG00000023678	SLTM	97	88.848	Ursus_maritimus
MGP_CAROLIEiJ_G0032404	Sltm	95	88.685	ENSVPAG00000008606	SLTM	59	90.295	Vicugna_pacos
MGP_CAROLIEiJ_G0032404	Sltm	98	88.900	ENSVVUG00000001450	SLTM	65	91.935	Vulpes_vulpes
MGP_CAROLIEiJ_G0032404	Sltm	82	45.011	ENSXMAG00000014466	sltm	91	45.969	Xiphophorus_maculatus