EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032467 (Gene tree)
Gene ID: 110301884
Gene Symbol: Ddx43
Alias: ENSMUSG00000070291|OTTMUSG00000019690
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 27446 bases
Position: chr9:75408222-75435667
Accession: 110301884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0088814	KH_1	PF00013.29	4.4e-12	1	1
MGP_CAROLIEiJ_P0088814	DEAD	PF00270.29	2.5e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0088814	-	2207	-	MGP_CAROLIEiJ_P0088814	646 (aa)	XP_021028242	UPI000A316C29

Gene Model

Click here to download MGP_CAROLIEiJ_G0032467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0032467	Ddx43	54	31.921	MGP_CAROLIEiJ_G0017495	-	84	31.921
MGP_CAROLIEiJ_G0032467	Ddx43	62	33.086	MGP_CAROLIEiJ_G0014656	Ddx59	64	33.086
MGP_CAROLIEiJ_G0032467	Ddx43	60	40.253	MGP_CAROLIEiJ_G0018893	Ddx4	56	40.253
MGP_CAROLIEiJ_G0032467	Ddx43	54	30.423	MGP_CAROLIEiJ_G0031510	Ddx28	70	30.423
MGP_CAROLIEiJ_G0032467	Ddx43	74	36.066	MGP_CAROLIEiJ_G0017314	Ddx42	50	36.066
MGP_CAROLIEiJ_G0032467	Ddx43	63	40.757	MGP_CAROLIEiJ_G0020240	Ddx23	54	40.757
MGP_CAROLIEiJ_G0032467	Ddx43	64	37.176	MGP_CAROLIEiJ_G0018568	Ddx41	65	37.470
MGP_CAROLIEiJ_G0032467	Ddx43	68	43.750	MGP_CAROLIEiJ_G0020017	Ddx17	67	43.750
MGP_CAROLIEiJ_G0032467	Ddx43	60	34.663	MGP_CAROLIEiJ_G0031139	Ddx49	81	34.663
MGP_CAROLIEiJ_G0032467	Ddx43	53	31.768	MGP_CAROLIEiJ_G0027755	-	80	32.692
MGP_CAROLIEiJ_G0032467	Ddx43	63	34.118	MGP_CAROLIEiJ_G0016888	Ddx52	69	34.135
MGP_CAROLIEiJ_G0032467	Ddx43	57	40.052	MGP_CAROLIEiJ_G0032941	Ddx3x	61	39.012
MGP_CAROLIEiJ_G0032467	Ddx43	59	35.678	MGP_CAROLIEiJ_G0028986	Ddx47	91	34.218
MGP_CAROLIEiJ_G0032467	Ddx43	59	30.469	MGP_CAROLIEiJ_G0032122	Ddx6	76	30.469
MGP_CAROLIEiJ_G0032467	Ddx43	55	34.375	MGP_CAROLIEiJ_G0014529	Ddx18	56	33.506
MGP_CAROLIEiJ_G0032467	Ddx43	60	39.012	MGP_CAROLIEiJ_G0015028	D1Pas1	61	39.012

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032467	Ddx43	100	81.231	ENSAMEG00000007851	-	100	81.385	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032467	Ddx43	100	76.198	ENSBTAG00000021814	-	99	76.198	Bos_taurus
MGP_CAROLIEiJ_G0032467	Ddx43	99	75.155	ENSCAFG00020002717	-	99	75.155	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032467	Ddx43	100	80.341	ENSCAFG00020010029	-	100	80.341	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032467	Ddx43	100	76.352	ENSCHIG00000017351	-	99	76.352	Capra_hircus
MGP_CAROLIEiJ_G0032467	Ddx43	78	81.673	ENSCAPG00000004247	-	100	81.673	Cavia_aperea
MGP_CAROLIEiJ_G0032467	Ddx43	100	85.935	ENSCPOG00000003991	-	100	86.090	Cavia_porcellus
MGP_CAROLIEiJ_G0032467	Ddx43	100	77.932	ENSCLAG00000010261	-	100	78.241	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032467	Ddx43	61	79.290	ENSCHOG00000003450	-	69	79.290	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0032467	Ddx43	100	94.892	ENSCGRG00001001145	Ddx43	100	94.892	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032467	Ddx43	87	96.092	ENSCGRG00000010217	Ddx43	100	96.092	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032467	Ddx43	100	82.154	ENSDNOG00000017589	-	99	82.154	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032467	Ddx43	100	86.090	ENSDORG00000030010	Ddx43	100	86.862	Dipodomys_ordii
MGP_CAROLIEiJ_G0032467	Ddx43	80	90.560	ENSETEG00000001887	-	81	90.560	Echinops_telfairi
MGP_CAROLIEiJ_G0032467	Ddx43	100	82.226	ENSEASG00005004346	-	89	82.226	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032467	Ddx43	100	82.071	ENSECAG00000017971	DDX43	98	82.071	Equus_caballus
MGP_CAROLIEiJ_G0032467	Ddx43	100	79.289	ENSFCAG00000031631	-	99	79.289	Felis_catus
MGP_CAROLIEiJ_G0032467	Ddx43	87	87.034	ENSHGLG00000001118	-	100	87.034	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032467	Ddx43	92	85.378	ENSHGLG00100011895	-	99	82.115	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032467	Ddx43	87	80.284	ENSSTOG00000032538	-	100	80.284	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032467	Ddx43	100	88.408	ENSJJAG00000014184	Ddx43	100	89.490	Jaculus_jaculus
MGP_CAROLIEiJ_G0032467	Ddx43	93	84.793	ENSLAFG00000012755	-	100	84.793	Loxodonta_africana
MGP_CAROLIEiJ_G0032467	Ddx43	100	93.344	ENSMAUG00000001441	Ddx43	100	93.034	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032467	Ddx43	100	93.837	ENSMOCG00000012956	Ddx43	100	93.683	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032467	Ddx43	100	99.381	ENSMUSG00000070291	Ddx43	100	99.381	Mus_musculus
MGP_CAROLIEiJ_G0032467	Ddx43	100	82.998	MGP_PahariEiJ_G0015333	Ddx43	100	82.998	Mus_pahari
MGP_CAROLIEiJ_G0032467	Ddx43	100	99.381	MGP_SPRETEiJ_G0033607	Ddx43	100	99.381	Mus_spretus
MGP_CAROLIEiJ_G0032467	Ddx43	100	81.144	ENSMPUG00000004342	-	99	81.144	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032467	Ddx43	100	82.488	ENSMLUG00000017604	-	100	82.642	Myotis_lucifugus
MGP_CAROLIEiJ_G0032467	Ddx43	100	93.034	ENSNGAG00000015102	Ddx43	100	93.034	Nannospalax_galili
MGP_CAROLIEiJ_G0032467	Ddx43	75	88.393	ENSOPRG00000013523	-	86	88.393	Ochotona_princeps
MGP_CAROLIEiJ_G0032467	Ddx43	84	85.478	ENSODEG00000016207	-	99	85.478	Octodon_degus
MGP_CAROLIEiJ_G0032467	Ddx43	100	77.280	ENSOCUG00000006338	-	100	77.898	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032467	Ddx43	98	65.669	ENSOCUG00000025811	-	98	65.669	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032467	Ddx43	100	75.889	ENSOARG00000010873	-	99	75.889	Ovis_aries
MGP_CAROLIEiJ_G0032467	Ddx43	100	79.598	ENSPTIG00000017842	-	99	79.598	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032467	Ddx43	87	97.513	ENSPEMG00000023986	Ddx43	100	97.513	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032467	Ddx43	99	80.930	ENSPCAG00000005962	-	99	81.550	Procavia_capensis
MGP_CAROLIEiJ_G0032467	Ddx43	87	88.121	ENSPVAG00000012718	-	99	88.121	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032467	Ddx43	100	97.833	ENSRNOG00000050868	Ddx43	100	97.833	Rattus_norvegicus
MGP_CAROLIEiJ_G0032467	Ddx43	84	85.923	ENSSARG00000013493	-	99	85.923	Sorex_araneus
MGP_CAROLIEiJ_G0032467	Ddx43	100	77.280	ENSSSCG00000004287	-	99	77.898	Sus_scrofa
MGP_CAROLIEiJ_G0032467	Ddx43	87	73.357	ENSTTRG00000001488	-	99	73.357	Tursiops_truncatus
MGP_CAROLIEiJ_G0032467	Ddx43	83	77.574	ENSUAMG00000012894	-	83	77.757	Ursus_americanus
MGP_CAROLIEiJ_G0032467	Ddx43	100	81.019	ENSUMAG00000012291	-	99	81.173	Ursus_maritimus
MGP_CAROLIEiJ_G0032467	Ddx43	94	72.295	ENSVPAG00000004969	-	100	72.787	Vicugna_pacos
MGP_CAROLIEiJ_G0032467	Ddx43	100	80.031	ENSVVUG00000013908	-	100	80.031	Vulpes_vulpes