EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032586 (Gene tree)
Gene ID: -
Gene Symbol: Srprb
Alias: -
Full Name: signal recognition particle receptor%2C B subunit
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 13518 bases
Position: chr9:98607201-98620718
Accession: 102964
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0089338	MMR_HSR1	PF01926.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0089339	-	2894	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0089338	-	2863	-	MGP_CAROLIEiJ_P0089338	269 (aa)	-	-
MGP_CAROLIEiJ_T0089340	-	230	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0032586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032586's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0032586	Srprb	54	31.507	MGP_CAROLIEiJ_G0022597	Arl2	74	31.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032586	Srprb	100	90.406	ENSG00000144867	SRPRB	99	94.969	Homo_sapiens
MGP_CAROLIEiJ_G0032586	Srprb	100	89.299	ENSANAG00000028236	SRPRB	100	89.299	Aotus_nancymaae
MGP_CAROLIEiJ_G0032586	Srprb	100	89.299	ENSBTAG00000044075	SRPRB	92	89.668	Bos_taurus
MGP_CAROLIEiJ_G0032586	Srprb	100	89.299	ENSCJAG00000002845	SRPRB	100	89.299	Callithrix_jacchus
MGP_CAROLIEiJ_G0032586	Srprb	100	89.299	ENSCAFG00020027568	SRPRB	100	89.668	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032586	Srprb	100	88.930	ENSCHIG00000019717	SRPRB	100	89.299	Capra_hircus
MGP_CAROLIEiJ_G0032586	Srprb	100	87.407	ENSTSYG00000031948	SRPRB	100	87.407	Carlito_syrichta
MGP_CAROLIEiJ_G0032586	Srprb	100	81.919	ENSCPOG00000030107	SRPRB	100	81.919	Cavia_porcellus
MGP_CAROLIEiJ_G0032586	Srprb	100	87.454	ENSCCAG00000033027	SRPRB	100	87.454	Cebus_capucinus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSCATG00000033438	SRPRB	100	90.775	Cercocebus_atys
MGP_CAROLIEiJ_G0032586	Srprb	100	88.930	ENSCLAG00000002810	SRPRB	100	88.930	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSCSAG00000010699	SRPRB	100	90.775	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032586	Srprb	100	81.550	ENSCHOG00000011792	SRPRB	100	81.550	Choloepus_hoffmanni
MGP_CAROLIEiJ_G0032586	Srprb	100	74.539	ENSCANG00000043327	SRPRB	100	74.539	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032586	Srprb	100	94.424	ENSCGRG00001018121	Srprb	100	94.424	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032586	Srprb	96	93.436	ENSCGRG00000014367	Srprb	99	93.436	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032586	Srprb	100	87.823	ENSDNOG00000032146	SRPRB	100	87.823	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0032586	Srprb	86	88.261	ENSDORG00000000764	Srprb	85	89.954	Dipodomys_ordii
MGP_CAROLIEiJ_G0032586	Srprb	100	88.561	ENSEASG00005003967	SRPRB	100	88.930	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032586	Srprb	100	88.561	ENSECAG00000036666	SRPRB	100	88.930	Equus_caballus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.037	ENSFCAG00000037571	SRPRB	92	90.037	Felis_catus
MGP_CAROLIEiJ_G0032586	Srprb	100	88.561	ENSFDAG00000017529	SRPRB	100	88.561	Fukomys_damarensis
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSGGOG00000027849	SRPRB	100	90.775	Gorilla_gorilla
MGP_CAROLIEiJ_G0032586	Srprb	100	88.561	ENSHGLG00000016818	SRPRB	100	89.299	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032586	Srprb	100	88.561	ENSHGLG00100018893	SRPRB	100	89.299	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032586	Srprb	100	84.871	ENSSTOG00000022718	SRPRB	100	84.871	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSMFAG00000039758	SRPRB	100	90.775	Macaca_fascicularis
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSMMUG00000008918	SRPRB	100	90.775	Macaca_mulatta
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSMNEG00000032832	SRPRB	100	90.775	Macaca_nemestrina
MGP_CAROLIEiJ_G0032586	Srprb	100	90.775	ENSMLEG00000035589	SRPRB	100	90.775	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032586	Srprb	100	95.539	ENSMAUG00000021695	Srprb	100	95.539	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.406	ENSMICG00000048959	SRPRB	100	90.406	Microcebus_murinus
MGP_CAROLIEiJ_G0032586	Srprb	100	82.900	ENSMODG00000018493	SRPRB	100	82.900	Monodelphis_domestica
MGP_CAROLIEiJ_G0032586	Srprb	100	98.885	ENSMUSG00000032553	Srprb	100	98.885	Mus_musculus
MGP_CAROLIEiJ_G0032586	Srprb	100	98.141	MGP_PahariEiJ_G0015454	Srprb	100	98.141	Mus_pahari
MGP_CAROLIEiJ_G0032586	Srprb	100	98.141	MGP_SPRETEiJ_G0033731	Srprb	100	98.141	Mus_spretus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.037	ENSMPUG00000009687	SRPRB	100	90.037	Mustela_putorius_furo
MGP_CAROLIEiJ_G0032586	Srprb	100	92.937	ENSNGAG00000024311	-	100	92.937	Nannospalax_galili
MGP_CAROLIEiJ_G0032586	Srprb	100	90.037	ENSNLEG00000003655	SRPRB	100	90.037	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032586	Srprb	100	87.823	ENSODEG00000018092	SRPRB	100	88.561	Octodon_degus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.406	ENSOCUG00000007623	SRPRB	100	91.144	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032586	Srprb	100	89.668	ENSOGAG00000005243	SRPRB	100	89.668	Otolemur_garnettii
MGP_CAROLIEiJ_G0032586	Srprb	86	87.446	ENSOARG00000008412	SRPRB	92	90.868	Ovis_aries
MGP_CAROLIEiJ_G0032586	Srprb	100	90.406	ENSPPAG00000023940	SRPRB	100	90.406	Pan_paniscus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.037	ENSPPRG00000023305	SRPRB	100	90.037	Panthera_pardus
MGP_CAROLIEiJ_G0032586	Srprb	100	90.037	ENSPTIG00000007351	SRPRB	100	90.037	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032586	Srprb	100	90.406	ENSPTRG00000015413	SRPRB	100	90.406	Pan_troglodytes
MGP_CAROLIEiJ_G0032586	Srprb	100	90.406	ENSPANG00000023015	SRPRB	100	90.406	Papio_anubis
MGP_CAROLIEiJ_G0032586	Srprb	100	95.167	ENSPEMG00000017954	Srprb	100	95.167	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032586	Srprb	100	90.037	ENSPPYG00000014115	SRPRB	100	90.037	Pongo_abelii
MGP_CAROLIEiJ_G0032586	Srprb	100	81.852	ENSPCAG00000013823	SRPRB	100	81.852	Procavia_capensis
MGP_CAROLIEiJ_G0032586	Srprb	100	89.668	ENSPVAG00000011319	SRPRB	100	89.668	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032586	Srprb	100	91.144	ENSRBIG00000027819	SRPRB	100	91.144	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032586	Srprb	100	91.144	ENSRROG00000030536	SRPRB	100	91.144	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032586	Srprb	74	85.572	ENSSBOG00000015129	SRPRB	100	85.572	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032586	Srprb	100	88.192	ENSSARG00000012943	SRPRB	100	88.192	Sorex_araneus
MGP_CAROLIEiJ_G0032586	Srprb	100	88.192	ENSSSCG00000011639	SRPRB	100	88.192	Sus_scrofa
MGP_CAROLIEiJ_G0032586	Srprb	100	88.848	ENSTBEG00000006116	SRPRB	100	88.848	Tupaia_belangeri
MGP_CAROLIEiJ_G0032586	Srprb	100	81.181	ENSTTRG00000007802	SRPRB	100	81.181	Tursiops_truncatus
MGP_CAROLIEiJ_G0032586	Srprb	100	88.561	ENSUAMG00000018135	SRPRB	100	88.561	Ursus_americanus
MGP_CAROLIEiJ_G0032586	Srprb	100	88.192	ENSUMAG00000015817	SRPRB	100	88.192	Ursus_maritimus
MGP_CAROLIEiJ_G0032586	Srprb	100	88.930	ENSVVUG00000005707	SRPRB	100	89.299	Vulpes_vulpes