EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032737 (Gene tree)
Gene ID: 110301818
Gene Symbol: -
Alias: -
Full Name: coiled-coil domain containing 12
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 53829 bases
Position: chr9:105936239-105990067
Accession: 110301818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0090309	cwf18	PF08315.12	2.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0090302	-	1052	-	MGP_CAROLIEiJ_P0090302	166 (aa)	XP_021028144	UPI00001818A2
MGP_CAROLIEiJ_T0090303	-	1142	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0090304	-	476	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0090305	-	449	-	MGP_CAROLIEiJ_P0090305	141 (aa)	-	-
MGP_CAROLIEiJ_T0090306	-	477	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0090307	-	436	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0090308	-	550	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0090309	-	587	-	MGP_CAROLIEiJ_P0090309	82 (aa)	-	-
MGP_CAROLIEiJ_T0090311	-	484	-	-	- (aa)	-	-
MGP_CAROLIEiJ_T0090310	-	572	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0032737's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032737's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSG00000160799	CCDC12	100	90.361	Homo_sapiens
MGP_CAROLIEiJ_G0032737	-	96	70.988	ENSAPOG00000014426	ccdc12	59	70.988	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032737	-	100	93.976	ENSAMEG00000012658	CCDC12	100	93.976	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSACIG00000015192	ccdc12	80	77.876	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSACIG00000022676	-	81	78.070	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032737	-	96	71.429	ENSAOCG00000024127	ccdc12	95	71.429	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032737	-	99	70.370	ENSAPEG00000009155	ccdc12	84	70.988	Amphiprion_percula
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSATEG00000004807	ccdc12	100	69.630	Anabas_testudineus
MGP_CAROLIEiJ_G0032737	-	89	73.418	ENSAPLG00000005482	CCDC12	99	70.588	Anas_platyrhynchos
MGP_CAROLIEiJ_G0032737	-	100	74.854	ENSACAG00000004727	CCDC12	86	74.854	Anolis_carolinensis
MGP_CAROLIEiJ_G0032737	-	81	91.791	ENSANAG00000024483	CCDC12	100	91.791	Aotus_nancymaae
MGP_CAROLIEiJ_G0032737	-	93	60.510	ENSACLG00000012742	-	96	60.510	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032737	-	96	70.370	ENSACLG00000005356	ccdc12	98	70.370	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032737	-	96	70.122	ENSAMXG00000016319	ccdc12	98	70.122	Astyanax_mexicanus
MGP_CAROLIEiJ_G0032737	-	100	89.881	ENSBTAG00000011311	CCDC12	100	90.476	Bos_taurus
MGP_CAROLIEiJ_G0032737	-	79	53.846	WBGene00022092	Y69A2AR.21	86	40.000	Caenorhabditis_elegans
MGP_CAROLIEiJ_G0032737	-	100	90.964	ENSCJAG00000002280	CCDC12	100	90.964	Callithrix_jacchus
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSCAFG00000013588	CCDC12	100	93.373	Canis_familiaris
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSCAFG00020014024	CCDC12	93	93.373	Canis_lupus_dingo
MGP_CAROLIEiJ_G0032737	-	100	89.286	ENSCHIG00000014512	CCDC12	100	89.881	Capra_hircus
MGP_CAROLIEiJ_G0032737	-	100	90.964	ENSTSYG00000032837	CCDC12	100	90.964	Carlito_syrichta
MGP_CAROLIEiJ_G0032737	-	71	100.000	ENSCAPG00000007935	CCDC12	100	73.134	Cavia_aperea
MGP_CAROLIEiJ_G0032737	-	100	92.771	ENSCPOG00000032515	CCDC12	100	92.771	Cavia_porcellus
MGP_CAROLIEiJ_G0032737	-	100	90.964	ENSCCAG00000020126	CCDC12	93	90.964	Cebus_capucinus
MGP_CAROLIEiJ_G0032737	-	100	75.882	ENSCATG00000033681	CCDC12	92	75.882	Cercocebus_atys
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSCLAG00000016013	CCDC12	100	93.373	Chinchilla_lanigera
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSCSAG00000016154	CCDC12	93	90.361	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032737	-	99	75.301	ENSCPBG00000015804	CCDC12	79	75.301	Chrysemys_picta_bellii
MGP_CAROLIEiJ_G0032737	-	96	50.299	ENSCING00000005261	-	96	50.299	Ciona_intestinalis
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSCANG00000020857	CCDC12	93	90.361	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032737	-	100	98.193	ENSCGRG00001000459	Ccdc12	100	98.193	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032737	-	100	98.193	ENSCGRG00000012816	Ccdc12	100	98.193	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032737	-	96	69.136	ENSCSEG00000004543	ccdc12	98	69.136	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSCVAG00000011342	ccdc12	100	70.370	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032737	-	96	68.125	ENSDARG00000023003	ccdc12	98	68.125	Danio_rerio
MGP_CAROLIEiJ_G0032737	-	100	93.976	ENSDORG00000016567	-	100	93.976	Dipodomys_ordii
MGP_CAROLIEiJ_G0032737	-	100	81.928	ENSDORG00000024399	-	100	81.928	Dipodomys_ordii
MGP_CAROLIEiJ_G0032737	-	93	43.871	FBgn0039732	CG15525	89	43.871	Drosophila_melanogaster
MGP_CAROLIEiJ_G0032737	-	68	91.150	ENSETEG00000000030	CCDC12	100	91.150	Echinops_telfairi
MGP_CAROLIEiJ_G0032737	-	96	62.264	ENSEBUG00000005674	ccdc12	98	62.264	Eptatretus_burgeri
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSEASG00005008148	-	69	93.373	Equus_asinus_asinus
MGP_CAROLIEiJ_G0032737	-	100	87.952	ENSECAG00000008649	CCDC12	100	87.952	Equus_caballus
MGP_CAROLIEiJ_G0032737	-	96	69.136	ENSELUG00000024105	ccdc12	98	69.325	Esox_lucius
MGP_CAROLIEiJ_G0032737	-	100	93.976	ENSFCAG00000015474	CCDC12	100	93.976	Felis_catus
MGP_CAROLIEiJ_G0032737	-	76	87.097	ENSFALG00000001895	CCDC12	98	63.522	Ficedula_albicollis
MGP_CAROLIEiJ_G0032737	-	100	94.578	ENSFDAG00000002549	CCDC12	100	94.578	Fukomys_damarensis
MGP_CAROLIEiJ_G0032737	-	96	70.370	ENSFHEG00000016247	ccdc12	91	70.370	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0032737	-	71	93.103	ENSGMOG00000016901	ccdc12	98	60.248	Gadus_morhua
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSGAFG00000006762	ccdc12	98	68.944	Gambusia_affinis
MGP_CAROLIEiJ_G0032737	-	96	67.081	ENSGACG00000008629	ccdc12	98	67.081	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032737	-	99	76.506	ENSGAGG00000019688	CCDC12	98	76.506	Gopherus_agassizii
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSGGOG00000009012	CCDC12	93	90.361	Gorilla_gorilla
MGP_CAROLIEiJ_G0032737	-	96	70.988	ENSHBUG00000016447	ccdc12	98	70.988	Haplochromis_burtoni
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSHGLG00000014058	CCDC12	100	93.373	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSHGLG00100005918	CCDC12	100	93.373	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0032737	-	96	65.644	ENSHCOG00000015164	ccdc12	98	65.644	Hippocampus_comes
MGP_CAROLIEiJ_G0032737	-	71	93.103	ENSIPUG00000001310	Ccdc12	98	67.901	Ictalurus_punctatus
MGP_CAROLIEiJ_G0032737	-	100	95.181	ENSSTOG00000003085	CCDC12	100	95.181	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0032737	-	100	93.976	ENSJJAG00000014918	Ccdc12	100	93.976	Jaculus_jaculus
MGP_CAROLIEiJ_G0032737	-	96	68.098	ENSKMAG00000013891	ccdc12	98	68.098	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032737	-	96	70.000	ENSLBEG00000024714	ccdc12	85	70.000	Labrus_bergylta
MGP_CAROLIEiJ_G0032737	-	96	73.750	ENSLOCG00000005683	ccdc12	89	73.750	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0032737	-	71	98.276	ENSLAFG00000022573	-	98	93.750	Loxodonta_africana
MGP_CAROLIEiJ_G0032737	-	97	86.335	ENSLAFG00000027745	-	99	86.335	Loxodonta_africana
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSMFAG00000002976	CCDC12	93	90.361	Macaca_fascicularis
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSMMUG00000019810	CCDC12	93	90.361	Macaca_mulatta
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSMNEG00000035785	CCDC12	93	90.361	Macaca_nemestrina
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSMLEG00000038060	CCDC12	93	90.361	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032737	-	71	93.103	ENSMAMG00000012165	ccdc12	98	69.753	Mastacembelus_armatus
MGP_CAROLIEiJ_G0032737	-	93	61.146	ENSMZEG00005019013	-	96	61.146	Maylandia_zebra
MGP_CAROLIEiJ_G0032737	-	96	70.988	ENSMZEG00005014728	ccdc12	98	70.988	Maylandia_zebra
MGP_CAROLIEiJ_G0032737	-	71	87.931	ENSMGAG00000002815	CCDC12	99	64.205	Meleagris_gallopavo
MGP_CAROLIEiJ_G0032737	-	100	96.988	ENSMAUG00000008879	Ccdc12	100	96.988	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032737	-	100	92.814	ENSMICG00000032886	CCDC12	100	92.814	Microcebus_murinus
MGP_CAROLIEiJ_G0032737	-	100	96.988	ENSMOCG00000004483	Ccdc12	100	96.988	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSMMOG00000001860	ccdc12	75	74.545	Mola_mola
MGP_CAROLIEiJ_G0032737	-	100	78.571	ENSMODG00000013967	-	100	78.571	Monodelphis_domestica
MGP_CAROLIEiJ_G0032737	-	100	64.671	ENSMODG00000025021	-	100	64.671	Monodelphis_domestica
MGP_CAROLIEiJ_G0032737	-	100	64.671	ENSMODG00000022615	-	100	64.671	Monodelphis_domestica
MGP_CAROLIEiJ_G0032737	-	96	69.136	ENSMALG00000011850	ccdc12	98	69.136	Monopterus_albus
MGP_CAROLIEiJ_G0032737	-	100	98.795	ENSMUSG00000019659	Ccdc12	100	98.795	Mus_musculus
MGP_CAROLIEiJ_G0032737	-	100	100.000	MGP_PahariEiJ_G0015604	Ccdc12	100	100.000	Mus_pahari
MGP_CAROLIEiJ_G0032737	-	100	98.193	MGP_SPRETEiJ_G0033885	Ccdc12	100	98.193	Mus_spretus
MGP_CAROLIEiJ_G0032737	-	100	87.952	ENSMLUG00000009547	CCDC12	100	87.952	Myotis_lucifugus
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSNGAG00000004149	Ccdc12	100	93.373	Nannospalax_galili
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSNBRG00000015275	ccdc12	98	66.250	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032737	-	100	88.554	ENSNLEG00000006219	CCDC12	100	88.554	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032737	-	99	85.366	ENSOPRG00000005086	CCDC12	99	85.366	Ochotona_princeps
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSODEG00000012202	CCDC12	100	93.373	Octodon_degus
MGP_CAROLIEiJ_G0032737	-	96	70.988	ENSONIG00000003061	ccdc12	98	70.988	Oreochromis_niloticus
MGP_CAROLIEiJ_G0032737	-	88	75.641	ENSOANG00000004263	-	100	72.388	Ornithorhynchus_anatinus
MGP_CAROLIEiJ_G0032737	-	100	92.771	ENSOCUG00000012431	CCDC12	85	92.771	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0032737	-	71	93.103	ENSORLG00000008126	ccdc12	98	68.098	Oryzias_latipes
MGP_CAROLIEiJ_G0032737	-	96	69.565	ENSORLG00020013927	ccdc12	98	69.565	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032737	-	96	69.565	ENSORLG00015020115	ccdc12	98	69.565	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032737	-	96	69.565	ENSOMEG00000022304	ccdc12	98	69.565	Oryzias_melastigma
MGP_CAROLIEiJ_G0032737	-	96	69.565	ENSOMEG00000014082	ccdc12	98	69.565	Oryzias_melastigma
MGP_CAROLIEiJ_G0032737	-	71	98.276	ENSOGAG00000016807	CCDC12	100	94.643	Otolemur_garnettii
MGP_CAROLIEiJ_G0032737	-	100	78.049	ENSOARG00000006426	CCDC12	100	89.051	Ovis_aries
MGP_CAROLIEiJ_G0032737	-	100	89.759	ENSPPAG00000028782	CCDC12	93	89.759	Pan_paniscus
MGP_CAROLIEiJ_G0032737	-	100	93.976	ENSPPRG00000013547	CCDC12	100	93.976	Panthera_pardus
MGP_CAROLIEiJ_G0032737	-	100	93.976	ENSPTIG00000014875	CCDC12	95	93.976	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSPTRG00000014862	CCDC12	93	90.361	Pan_troglodytes
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSPANG00000017485	CCDC12	95	90.361	Papio_anubis
MGP_CAROLIEiJ_G0032737	-	96	70.186	ENSPKIG00000019130	ccdc12	98	71.429	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032737	-	89	74.684	ENSPSIG00000010867	CCDC12	100	81.250	Pelodiscus_sinensis
MGP_CAROLIEiJ_G0032737	-	96	68.519	ENSPMGG00000012211	ccdc12	98	68.519	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0032737	-	100	98.193	ENSPEMG00000022196	-	100	98.193	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032737	-	100	77.844	ENSPEMG00000001376	-	100	77.844	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032737	-	94	66.879	ENSPMAG00000000005	ccdc12	99	65.680	Petromyzon_marinus
MGP_CAROLIEiJ_G0032737	-	100	78.916	ENSPCIG00000025941	CCDC12	100	78.916	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSPFOG00000000343	ccdc12	98	69.753	Poecilia_formosa
MGP_CAROLIEiJ_G0032737	-	96	68.944	ENSPLAG00000019010	ccdc12	98	68.944	Poecilia_latipinna
MGP_CAROLIEiJ_G0032737	-	71	91.379	ENSPMEG00000022371	ccdc12	79	69.753	Poecilia_mexicana
MGP_CAROLIEiJ_G0032737	-	96	69.753	ENSPREG00000020932	ccdc12	79	69.753	Poecilia_reticulata
MGP_CAROLIEiJ_G0032737	-	100	91.566	ENSPPYG00000013924	CCDC12	82	91.566	Pongo_abelii
MGP_CAROLIEiJ_G0032737	-	100	92.814	ENSPCAG00000005800	CCDC12	100	92.814	Procavia_capensis
MGP_CAROLIEiJ_G0032737	-	100	92.216	ENSPCOG00000018682	CCDC12	93	92.216	Propithecus_coquereli
MGP_CAROLIEiJ_G0032737	-	100	92.169	ENSPVAG00000004204	CCDC12	100	92.169	Pteropus_vampyrus
MGP_CAROLIEiJ_G0032737	-	96	70.988	ENSPNYG00000016295	ccdc12	98	70.988	Pundamilia_nyererei
MGP_CAROLIEiJ_G0032737	-	71	93.103	ENSPNAG00000028558	ccdc12	93	76.724	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032737	-	100	100.000	ENSRNOG00000020946	Ccdc12	100	100.000	Rattus_norvegicus
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSRBIG00000039910	CCDC12	93	90.361	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032737	-	100	90.361	ENSRROG00000039721	CCDC12	100	90.361	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032737	-	100	90.964	ENSSBOG00000035443	CCDC12	93	90.964	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032737	-	92	81.935	ENSSHAG00000003265	-	95	81.935	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032737	-	97	68.712	ENSSFOG00015001307	ccdc12	99	68.712	Scleropages_formosus
MGP_CAROLIEiJ_G0032737	-	96	70.370	ENSSMAG00000019856	ccdc12	98	70.370	Scophthalmus_maximus
MGP_CAROLIEiJ_G0032737	-	94	69.620	ENSSDUG00000006549	ccdc12	96	69.620	Seriola_dumerili
MGP_CAROLIEiJ_G0032737	-	96	69.753	ENSSLDG00000015956	ccdc12	98	69.753	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032737	-	58	96.875	ENSSARG00000004686	-	58	96.875	Sorex_araneus
MGP_CAROLIEiJ_G0032737	-	68	71.681	ENSSPUG00000013054	CCDC12	91	49.324	Sphenodon_punctatus
MGP_CAROLIEiJ_G0032737	-	96	69.753	ENSSPAG00000007010	ccdc12	98	69.753	Stegastes_partitus
MGP_CAROLIEiJ_G0032737	-	93	52.597	ENSSSCG00000007882	-	97	52.597	Sus_scrofa
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSSSCG00000011329	-	100	93.373	Sus_scrofa
MGP_CAROLIEiJ_G0032737	-	64	68.519	ENSTGUG00000000186	CCDC12	86	68.519	Taeniopygia_guttata
MGP_CAROLIEiJ_G0032737	-	96	66.038	ENSTRUG00000014023	ccdc12	83	66.038	Takifugu_rubripes
MGP_CAROLIEiJ_G0032737	-	96	68.553	ENSTNIG00000018407	ccdc12	96	68.553	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0032737	-	100	69.461	ENSTBEG00000000048	CCDC12	100	69.461	Tupaia_belangeri
MGP_CAROLIEiJ_G0032737	-	100	83.333	ENSTTRG00000015854	CCDC12	100	83.333	Tursiops_truncatus
MGP_CAROLIEiJ_G0032737	-	100	87.349	ENSUAMG00000025548	CCDC12	97	93.571	Ursus_americanus
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSUMAG00000004346	CCDC12	100	93.373	Ursus_maritimus
MGP_CAROLIEiJ_G0032737	-	68	75.221	ENSVPAG00000000070	-	100	75.221	Vicugna_pacos
MGP_CAROLIEiJ_G0032737	-	100	93.373	ENSVVUG00000004582	CCDC12	100	93.373	Vulpes_vulpes
MGP_CAROLIEiJ_G0032737	-	89	77.215	ENSXETG00000013123	ccdc12	98	76.692	Xenopus_tropicalis
MGP_CAROLIEiJ_G0032737	-	96	68.944	ENSXCOG00000019741	ccdc12	98	68.944	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0032737	-	96	68.944	ENSXMAG00000014098	ccdc12	79	68.944	Xiphophorus_maculatus