EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0032996 (Gene tree)
Gene ID: 110286530
Gene Symbol: Sept6
Alias: 2810035H17Rik|C920001C06Rik
Full Name: septin 6
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 79412 bases
Position: chrX:30132346-30211757
Accession: 110286530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0091215	MMR_HSR1	PF01926.23	7.1e-05	1	1
MGP_CAROLIEiJ_P0091214	MMR_HSR1	PF01926.23	7.1e-05	1	1
MGP_CAROLIEiJ_P0091216	MMR_HSR1	PF01926.23	7.1e-05	1	1
MGP_CAROLIEiJ_P0091217	MMR_HSR1	PF01926.23	0.00021	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0091215	-	4743	-	MGP_CAROLIEiJ_P0091215	427 (aa)	XP_021008593	UPI000A315323
MGP_CAROLIEiJ_T0091214	-	3457	XM_021152933	MGP_CAROLIEiJ_P0091214	429 (aa)	XP_021008591	UPI000A31A6A4
MGP_CAROLIEiJ_T0091217	-	530	-	MGP_CAROLIEiJ_P0091217	141 (aa)	-	UPI0000EE0492
MGP_CAROLIEiJ_T0091216	-	1852	-	MGP_CAROLIEiJ_P0091216	434 (aa)	XP_021008588	UPI000A31A439
MGP_CAROLIEiJ_T0091218	-	3385	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0032996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0032996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0032996	Sept6	99	37.241	MGP_CAROLIEiJ_G0017463	Sept9	81	46.970
MGP_CAROLIEiJ_G0032996	Sept6	97	40.610	MGP_CAROLIEiJ_G0031917	Sept7	92	39.906
MGP_CAROLIEiJ_G0032996	Sept6	76	41.791	MGP_CAROLIEiJ_G0020551	-	90	41.716
MGP_CAROLIEiJ_G0032996	Sept6	100	76.923	MGP_CAROLIEiJ_G0016340	Sept8	100	76.923
MGP_CAROLIEiJ_G0032996	Sept6	100	82.258	MGP_CAROLIEiJ_G0027424	Sept11	100	82.436
MGP_CAROLIEiJ_G0032996	Sept6	67	41.176	MGP_CAROLIEiJ_G0020416	Sept12	80	37.692
MGP_CAROLIEiJ_G0032996	Sept6	100	70.023	MGP_CAROLIEiJ_G0015340	Sept10	100	69.374
MGP_CAROLIEiJ_G0032996	Sept6	76	40.469	MGP_CAROLIEiJ_G0030492	Sept1	100	38.776
MGP_CAROLIEiJ_G0032996	Sept6	69	42.904	MGP_CAROLIEiJ_G0014457	-	100	41.284
MGP_CAROLIEiJ_G0032996	Sept6	67	43.729	MGP_CAROLIEiJ_G0016931	Sept4	89	43.541
MGP_CAROLIEiJ_G0032996	Sept6	68	41.751	MGP_CAROLIEiJ_G0020078	Sept3	88	41.751
MGP_CAROLIEiJ_G0032996	Sept6	97	58.313	MGP_CAROLIEiJ_G0027783	Sept14	95	58.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSG00000125354	SEPT6	100	96.503	Homo_sapiens
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSAPOG00000000347	sept6	100	89.461	Acanthochromis_polyacanthus
MGP_CAROLIEiJ_G0032996	Sept6	73	97.087	ENSAMEG00000000156	SEPT6	93	97.087	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0032996	Sept6	99	89.437	ENSACIG00000013682	sept6	99	89.437	Amphilophus_citrinellus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSAOCG00000011293	sept6	100	89.461	Amphiprion_ocellaris
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSAPEG00000005460	sept6	100	89.461	Amphiprion_percula
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSATEG00000018814	sept6	100	88.993	Anabas_testudineus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSANAG00000033580	SEPT6	100	96.503	Aotus_nancymaae
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSACLG00000001734	sept6	100	89.227	Astatotilapia_calliptera
MGP_CAROLIEiJ_G0032996	Sept6	100	89.277	ENSAMXG00000033660	sept6	100	89.277	Astyanax_mexicanus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSCJAG00000005022	SEPT6	100	96.503	Callithrix_jacchus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.277	ENSCCAG00000023266	SEPT6	100	89.277	Cebus_capucinus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSCATG00000036060	SEPT6	100	96.503	Cercocebus_atys
MGP_CAROLIEiJ_G0032996	Sept6	100	96.487	ENSCSAG00000018351	SEPT6	100	96.487	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSCANG00000016430	SEPT6	100	96.503	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0032996	Sept6	100	97.658	ENSCGRG00001014207	Sept6	100	97.658	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0032996	Sept6	99	96.437	ENSCGRG00000007825	Sept6	100	97.136	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0032996	Sept6	100	88.525	ENSCSEG00000002026	sept6	94	88.525	Cynoglossus_semilaevis
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSCVAG00000004959	sept6	100	89.227	Cyprinodon_variegatus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.696	ENSDARG00000010721	sept6	99	89.696	Danio_rerio
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSELUG00000020499	sept6	96	89.461	Esox_lucius
MGP_CAROLIEiJ_G0032996	Sept6	100	96.019	ENSFCAG00000008744	SEPT6	100	96.019	Felis_catus
MGP_CAROLIEiJ_G0032996	Sept6	100	95.338	ENSFDAG00000002473	SEPT6	100	95.338	Fukomys_damarensis
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSFHEG00000017987	sept6	100	89.227	Fundulus_heteroclitus
MGP_CAROLIEiJ_G0032996	Sept6	100	88.290	ENSGMOG00000001671	sept6	100	88.249	Gadus_morhua
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSGAFG00000000922	sept6	100	89.227	Gambusia_affinis
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSGACG00000017441	sept6	100	88.940	Gasterosteus_aculeatus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSGGOG00000009733	SEPT6	100	96.503	Gorilla_gorilla
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSHBUG00000017506	sept6	100	89.227	Haplochromis_burtoni
MGP_CAROLIEiJ_G0032996	Sept6	100	89.510	ENSHCOG00000017047	sept6	100	89.510	Hippocampus_comes
MGP_CAROLIEiJ_G0032996	Sept6	100	89.744	ENSIPUG00000019317	sept6	85	89.744	Ictalurus_punctatus
MGP_CAROLIEiJ_G0032996	Sept6	100	97.669	ENSJJAG00000020412	Sept6	100	97.669	Jaculus_jaculus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.044	ENSKMAG00000020207	sept6	100	89.044	Kryptolebias_marmoratus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.510	ENSLBEG00000028683	sept6	95	89.510	Labrus_bergylta
MGP_CAROLIEiJ_G0032996	Sept6	100	90.164	ENSLOCG00000015233	sept6	100	91.272	Lepisosteus_oculatus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSMFAG00000003084	SEPT6	100	96.503	Macaca_fascicularis
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSMMUG00000017669	SEPT6	100	96.503	Macaca_mulatta
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSMNEG00000026932	SEPT6	100	96.503	Macaca_nemestrina
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSMLEG00000030428	SEPT6	100	96.503	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSMAMG00000019988	sept6	100	89.461	Mastacembelus_armatus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSMZEG00005007935	sept6	89	89.227	Maylandia_zebra
MGP_CAROLIEiJ_G0032996	Sept6	100	97.436	ENSMAUG00000018038	Sept6	100	97.436	Mesocricetus_auratus
MGP_CAROLIEiJ_G0032996	Sept6	98	97.619	ENSMOCG00000000500	Sept6	99	97.837	Microtus_ochrogaster
MGP_CAROLIEiJ_G0032996	Sept6	97	90.097	ENSMMOG00000004176	sept6	97	90.097	Mola_mola
MGP_CAROLIEiJ_G0032996	Sept6	100	88.525	ENSMALG00000007921	sept6	100	88.525	Monopterus_albus
MGP_CAROLIEiJ_G0032996	Sept6	100	100.000	ENSMUSG00000050379	Sept6	100	100.000	Mus_musculus
MGP_CAROLIEiJ_G0032996	Sept6	80	99.115	MGP_PahariEiJ_G0031540	-	71	98.479	Mus_pahari
MGP_CAROLIEiJ_G0032996	Sept6	100	100.000	MGP_SPRETEiJ_G0034149	Sept6	100	100.000	Mus_spretus
MGP_CAROLIEiJ_G0032996	Sept6	97	95.673	ENSMLUG00000005623	SEPT6	95	95.673	Myotis_lucifugus
MGP_CAROLIEiJ_G0032996	Sept6	100	96.970	ENSNGAG00000010702	Sept6	100	96.970	Nannospalax_galili
MGP_CAROLIEiJ_G0032996	Sept6	99	81.221	ENSNBRG00000011675	sept6	99	81.221	Neolamprologus_brichardi
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSNLEG00000014873	SEPT6	100	96.503	Nomascus_leucogenys
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSONIG00000002528	sept6	99	89.227	Oreochromis_niloticus
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSORLG00000000997	sept6	100	90.250	Oryzias_latipes
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSORLG00020003886	sept6	100	88.993	Oryzias_latipes_hni
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSORLG00015013025	sept6	100	88.993	Oryzias_latipes_hsok
MGP_CAROLIEiJ_G0032996	Sept6	100	87.588	ENSOMEG00000014650	sept6	100	87.588	Oryzias_melastigma
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSPPAG00000040865	SEPT6	100	96.503	Pan_paniscus
MGP_CAROLIEiJ_G0032996	Sept6	100	95.785	ENSPPRG00000023588	SEPT6	100	95.785	Panthera_pardus
MGP_CAROLIEiJ_G0032996	Sept6	96	82.725	ENSPTIG00000015338	SEPT6	99	82.725	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0032996	Sept6	100	96.270	ENSPTRG00000022227	SEPT6	100	96.270	Pan_troglodytes
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSPANG00000000899	SEPT6	100	96.503	Papio_anubis
MGP_CAROLIEiJ_G0032996	Sept6	99	91.080	ENSPKIG00000013948	SEPT6	100	92.250	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032996	Sept6	100	85.781	ENSPKIG00000019114	sept6	100	85.781	Paramormyrops_kingsleyae
MGP_CAROLIEiJ_G0032996	Sept6	98	89.048	ENSPMGG00000012133	sept6	100	88.028	Periophthalmus_magnuspinnatus
MGP_CAROLIEiJ_G0032996	Sept6	100	97.669	ENSPEMG00000016450	Sept6	100	97.669	Peromyscus_maniculatus_bairdii
MGP_CAROLIEiJ_G0032996	Sept6	100	91.841	ENSPCIG00000028910	SEPT6	100	91.841	Phascolarctos_cinereus
MGP_CAROLIEiJ_G0032996	Sept6	98	89.786	ENSPFOG00000024721	sept6	97	89.786	Poecilia_formosa
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSPLAG00000019878	sept6	100	89.227	Poecilia_latipinna
MGP_CAROLIEiJ_G0032996	Sept6	73	85.437	ENSPLAG00000005147	sept6	93	88.000	Poecilia_latipinna
MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	ENSPMEG00000023470	sept6	100	89.227	Poecilia_mexicana
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSPREG00000012310	sept6	100	88.993	Poecilia_reticulata
MGP_CAROLIEiJ_G0032996	Sept6	100	94.614	ENSPPYG00000020673	SEPT6	100	94.614	Pongo_abelii
MGP_CAROLIEiJ_G0032996	Sept6	100	89.277	ENSPNYG00000009709	sept6	100	90.500	Pundamilia_nyererei
MGP_CAROLIEiJ_G0032996	Sept6	100	90.210	ENSPNAG00000021638	sept6	100	90.210	Pygocentrus_nattereri
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSRBIG00000044672	SEPT6	100	96.503	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0032996	Sept6	100	96.503	ENSRROG00000038667	SEPT6	100	96.503	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0032996	Sept6	100	96.270	ENSSBOG00000024143	SEPT6	100	96.270	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0032996	Sept6	99	91.294	ENSSHAG00000007460	SEPT6	98	91.294	Sarcophilus_harrisii
MGP_CAROLIEiJ_G0032996	Sept6	100	89.510	ENSSFOG00015010832	SEPT6	100	89.510	Scleropages_formosus
MGP_CAROLIEiJ_G0032996	Sept6	100	87.822	ENSSFOG00015005477	sept6	100	87.822	Scleropages_formosus
MGP_CAROLIEiJ_G0032996	Sept6	100	88.993	ENSSMAG00000012785	sept6	100	88.993	Scophthalmus_maximus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSSDUG00000005575	sept6	100	89.461	Seriola_dumerili
MGP_CAROLIEiJ_G0032996	Sept6	100	89.510	ENSSLDG00000003277	sept6	100	89.510	Seriola_lalandi_dorsalis
MGP_CAROLIEiJ_G0032996	Sept6	100	89.461	ENSSPAG00000010108	sept6	100	89.461	Stegastes_partitus
MGP_CAROLIEiJ_G0032996	Sept6	100	88.759	ENSTRUG00000010830	sept6	100	89.801	Takifugu_rubripes
MGP_CAROLIEiJ_G0032996	Sept6	100	87.354	ENSTNIG00000015761	sept6	99	87.354	Tetraodon_nigroviridis
MGP_CAROLIEiJ_G0032996	Sept6	74	83.810	ENSXCOG00000016712	sept6	89	85.043	Xiphophorus_couchianus
MGP_CAROLIEiJ_G0032996	Sept6	100	89.277	ENSXMAG00000013699	sept6	100	89.277	Xiphophorus_maculatus