EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0033087 (Gene tree)
Gene ID: 110287396
Gene Symbol: Gm648
Alias: LOC270599
Full Name: integrator complex subunit 6-like
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 5805 bases
Position: chrX:51478985-51484789
Accession: 110287396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0091480	INT_SG_DDX_CT_C	PF15300.6	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0091480	-	1041	XM_021154029	MGP_CAROLIEiJ_P0091480	213 (aa)	XP_021009688	UPI000A319E78

Gene Model

Click here to download MGP_CAROLIEiJ_G0033087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0033087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0033087	Gm648	69	43.226	MGP_CAROLIEiJ_G0033085	Ints6l	87	65.672

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0033087	Gm648	64	36.111	ENSG00000268940	CT45A1	71	34.965	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	35.099	ENSG00000228836	CT45A5	76	34.000	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	33.775	ENSG00000278085	CT45A8	76	32.667	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	64	37.324	ENSG00000269586	CT45A10	75	35.811	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	35.099	ENSG00000278289	CT45A6	76	34.000	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	33.775	ENSG00000271449	CT45A2	76	32.667	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	35.099	ENSG00000273696	CT45A7	76	34.000	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	34.437	ENSG00000269096	CT45A3	76	33.333	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	33.775	ENSG00000270946	CT45A9	76	32.667	Homo_sapiens
MGP_CAROLIEiJ_G0033087	Gm648	68	34.868	ENSAMEG00000005934	-	89	34.868	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0033087	Gm648	50	35.714	ENSCAFG00020024726	-	50	34.821	Canis_lupus_dingo
MGP_CAROLIEiJ_G0033087	Gm648	64	41.549	ENSTSYG00000003411	-	70	41.958	Carlito_syrichta
MGP_CAROLIEiJ_G0033087	Gm648	72	37.500	ENSCATG00000026275	-	72	36.585	Cercocebus_atys
MGP_CAROLIEiJ_G0033087	Gm648	82	34.807	ENSCSAG00000015072	-	90	34.807	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0033087	Gm648	72	37.107	ENSCSAG00000007640	-	75	37.107	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0033087	Gm648	53	38.710	ENSCANG00000040837	-	76	38.710	Colobus_angolensis_palliatus
MGP_CAROLIEiJ_G0033087	Gm648	99	64.815	ENSCGRG00001016867	Gm648	100	64.815	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0033087	Gm648	99	65.438	ENSCGRG00000002325	Gm648	98	65.438	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0033087	Gm648	61	32.308	ENSEBUG00000002938	-	67	32.061	Eptatretus_burgeri
MGP_CAROLIEiJ_G0033087	Gm648	64	36.364	ENSMFAG00000036609	-	75	36.364	Macaca_fascicularis
MGP_CAROLIEiJ_G0033087	Gm648	72	34.591	ENSMFAG00000035558	-	75	34.356	Macaca_fascicularis
MGP_CAROLIEiJ_G0033087	Gm648	72	35.220	ENSMMUG00000021984	-	73	34.969	Macaca_mulatta
MGP_CAROLIEiJ_G0033087	Gm648	72	35.220	ENSMNEG00000028699	-	75	34.969	Macaca_nemestrina
MGP_CAROLIEiJ_G0033087	Gm648	64	36.364	ENSMNEG00000040510	-	75	36.364	Macaca_nemestrina
MGP_CAROLIEiJ_G0033087	Gm648	72	36.875	ENSMLEG00000000289	-	75	35.976	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0033087	Gm648	65	39.041	ENSMLEG00000042160	-	72	38.000	Mandrillus_leucophaeus
MGP_CAROLIEiJ_G0033087	Gm648	99	50.000	ENSMOCG00000022308	Gm648	99	50.000	Microtus_ochrogaster
MGP_CAROLIEiJ_G0033087	Gm648	100	91.549	ENSMUSG00000064016	Gm648	100	91.549	Mus_musculus
MGP_CAROLIEiJ_G0033087	Gm648	69	43.871	ENSMUSG00000035967	Ints6l	86	67.164	Mus_musculus
MGP_CAROLIEiJ_G0033087	Gm648	100	85.446	MGP_PahariEiJ_G0031629	Gm648	100	85.446	Mus_pahari
MGP_CAROLIEiJ_G0033087	Gm648	69	43.871	MGP_PahariEiJ_G0031627	Ints6l	87	67.164	Mus_pahari
MGP_CAROLIEiJ_G0033087	Gm648	100	90.610	MGP_SPRETEiJ_G0034242	Gm648	100	90.610	Mus_spretus
MGP_CAROLIEiJ_G0033087	Gm648	69	43.871	MGP_SPRETEiJ_G0034240	Ints6l	87	67.164	Mus_spretus
MGP_CAROLIEiJ_G0033087	Gm648	64	37.671	ENSNLEG00000002303	-	70	37.671	Nomascus_leucogenys
MGP_CAROLIEiJ_G0033087	Gm648	65	45.139	ENSOCUG00000027335	-	66	44.444	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0033087	Gm648	51	47.706	ENSOARG00000011598	-	67	47.706	Ovis_aries
MGP_CAROLIEiJ_G0033087	Gm648	58	36.290	ENSPTRG00000028196	-	64	36.290	Pan_troglodytes
MGP_CAROLIEiJ_G0033087	Gm648	68	34.667	ENSPTRG00000047577	CT45A10	76	34.667	Pan_troglodytes
MGP_CAROLIEiJ_G0033087	Gm648	68	34.000	ENSPTRG00000047355	-	76	34.000	Pan_troglodytes
MGP_CAROLIEiJ_G0033087	Gm648	71	35.669	ENSPANG00000014397	-	71	35.669	Papio_anubis
MGP_CAROLIEiJ_G0033087	Gm648	68	38.411	ENSPANG00000023647	-	75	38.411	Papio_anubis
MGP_CAROLIEiJ_G0033087	Gm648	54	37.069	ENSPPYG00000020754	-	57	36.207	Pongo_abelii
MGP_CAROLIEiJ_G0033087	Gm648	67	36.486	ENSPPYG00000020755	-	75	36.486	Pongo_abelii
MGP_CAROLIEiJ_G0033087	Gm648	60	36.296	ENSPPYG00000020753	-	74	35.075	Pongo_abelii
MGP_CAROLIEiJ_G0033087	Gm648	60	43.066	ENSPVAG00000002652	-	100	43.066	Pteropus_vampyrus
MGP_CAROLIEiJ_G0033087	Gm648	65	40.690	ENSRROG00000017978	-	68	40.690	Rhinopithecus_roxellana
MGP_CAROLIEiJ_G0033087	Gm648	62	39.855	ENSSBOG00000024560	-	69	39.130	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0033087	Gm648	68	38.158	ENSUAMG00000003018	-	71	38.158	Ursus_americanus
MGP_CAROLIEiJ_G0033087	Gm648	50	42.202	ENSUAMG00000021456	-	52	43.119	Ursus_americanus
MGP_CAROLIEiJ_G0033087	Gm648	50	51.818	ENSVPAG00000011565	-	92	51.818	Vicugna_pacos