EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0033239 (Gene tree)
Gene ID: 110287269
Gene Symbol: Gspt2
Alias: -
Full Name: eukaryotic peptide chain release factor GTP-binding subunit ERF3B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 7259 bases
Position: chrX:89283153-89290411
Accession: 110287269
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0092141	PAM2	PF07145.15	3.9e-06	1	1
MGP_CAROLIEiJ_P0092141	GTP_EFTU	PF00009.27	1.4e-45	1	1
MGP_CAROLIEiJ_P0092141	GTP_EFTU_D2	PF03144.25	3.1e-07	1	1
MGP_CAROLIEiJ_P0092141	GTP_EFTU_D3	PF03143.17	9.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0092141	-	2498	XM_021153927	MGP_CAROLIEiJ_P0092141	632 (aa)	XP_021009586	UPI000A319982
MGP_CAROLIEiJ_T0092142	-	1926	-	MGP_CAROLIEiJ_P0092142	129 (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0033239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0033239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0033239	Gspt2	67	41.822	MGP_CAROLIEiJ_G0015162	Hbs1l	62	41.822
MGP_CAROLIEiJ_G0033239	Gspt2	99	82.803	MGP_CAROLIEiJ_G0020458	Gspt1	97	83.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0033239	Gspt2	99	88.517	ENSG00000189369	GSPT2	100	88.854	Homo_sapiens
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.854	ENSAMEG00000019869	GSPT2	100	88.540	Ailuropoda_melanoleuca
MGP_CAROLIEiJ_G0033239	Gspt2	99	87.879	ENSANAG00000031086	GSPT2	100	87.441	Aotus_nancymaae
MGP_CAROLIEiJ_G0033239	Gspt2	100	87.912	ENSBTAG00000013311	GSPT2	100	87.755	Bos_taurus
MGP_CAROLIEiJ_G0033239	Gspt2	99	88.038	ENSCJAG00000000368	GSPT2	100	87.598	Callithrix_jacchus
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.697	ENSCAFG00020020040	GSPT2	100	88.226	Canis_lupus_dingo
MGP_CAROLIEiJ_G0033239	Gspt2	100	87.912	ENSCPOG00000007083	GSPT2	100	87.598	Cavia_porcellus
MGP_CAROLIEiJ_G0033239	Gspt2	99	88.198	ENSCCAG00000032215	GSPT2	100	87.755	Cebus_capucinus
MGP_CAROLIEiJ_G0033239	Gspt2	99	88.517	ENSCSAG00000000126	GSPT2	100	88.854	Chlorocebus_sabaeus
MGP_CAROLIEiJ_G0033239	Gspt2	100	94.937	ENSCGRG00001002796	Gspt2	100	94.937	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0033239	Gspt2	100	94.937	ENSCGRG00000018704	Gspt2	100	94.937	Cricetulus_griseus_crigri
MGP_CAROLIEiJ_G0033239	Gspt2	100	83.542	ENSDNOG00000011822	GSPT2	100	82.915	Dasypus_novemcinctus
MGP_CAROLIEiJ_G0033239	Gspt2	100	86.970	ENSDORG00000012719	Gspt2	98	86.656	Dipodomys_ordii
MGP_CAROLIEiJ_G0033239	Gspt2	71	73.593	ENSEBUG00000004339	GSPT2	87	73.593	Eptatretus_burgeri
MGP_CAROLIEiJ_G0033239	Gspt2	98	84.751	ENSEEUG00000005355	GSPT2	100	85.512	Erinaceus_europaeus
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.854	ENSFCAG00000001558	GSPT2	100	88.383	Felis_catus
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.679	ENSFDAG00000009123	GSPT2	100	88.365	Fukomys_damarensis
MGP_CAROLIEiJ_G0033239	Gspt2	100	87.736	ENSHGLG00000001568	GSPT2	100	87.421	Heterocephalus_glaber_female
MGP_CAROLIEiJ_G0033239	Gspt2	100	86.950	ENSHGLG00100005633	GSPT2	100	86.635	Heterocephalus_glaber_male
MGP_CAROLIEiJ_G0033239	Gspt2	100	90.581	ENSSTOG00000008532	GSPT2	100	90.267	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0033239	Gspt2	99	85.008	ENSJJAG00000000985	Gspt2	98	84.326	Jaculus_jaculus
MGP_CAROLIEiJ_G0033239	Gspt2	100	86.028	ENSLAFG00000002545	GSPT2	100	85.714	Loxodonta_africana
MGP_CAROLIEiJ_G0033239	Gspt2	99	87.879	ENSMFAG00000036045	GSPT2	100	88.226	Macaca_fascicularis
MGP_CAROLIEiJ_G0033239	Gspt2	99	87.879	ENSMMUG00000029293	GSPT2	100	88.226	Macaca_mulatta
MGP_CAROLIEiJ_G0033239	Gspt2	99	93.312	ENSMOCG00000001273	Gspt2	99	93.312	Microtus_ochrogaster
MGP_CAROLIEiJ_G0033239	Gspt2	100	99.367	ENSMUSG00000071723	Gspt2	100	99.367	Mus_musculus
MGP_CAROLIEiJ_G0033239	Gspt2	100	98.734	MGP_PahariEiJ_G0031780	Gspt2	100	98.734	Mus_pahari
MGP_CAROLIEiJ_G0033239	Gspt2	100	99.209	MGP_SPRETEiJ_G0034406	Gspt2	100	99.209	Mus_spretus
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.383	ENSMPUG00000018783	GSPT2	100	88.069	Mustela_putorius_furo
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.069	ENSMLUG00000014559	GSPT2	100	87.755	Myotis_lucifugus
MGP_CAROLIEiJ_G0033239	Gspt2	99	89.440	ENSNGAG00000013281	Gspt2	99	89.206	Nannospalax_galili
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.226	ENSOGAG00000005266	GSPT2	100	87.912	Otolemur_garnettii
MGP_CAROLIEiJ_G0033239	Gspt2	93	89.358	ENSOARG00000005636	GSPT2	98	89.153	Ovis_aries
MGP_CAROLIEiJ_G0033239	Gspt2	100	88.540	ENSPPRG00000011599	GSPT2	100	88.069	Panthera_pardus
MGP_CAROLIEiJ_G0033239	Gspt2	100	87.912	ENSPTIG00000008104	GSPT2	100	87.441	Panthera_tigris_altaica
MGP_CAROLIEiJ_G0033239	Gspt2	99	88.114	ENSPPYG00000020360	GSPT2	99	88.748	Pongo_abelii
MGP_CAROLIEiJ_G0033239	Gspt2	83	90.095	ENSPCAG00000013962	GSPT2	100	90.095	Procavia_capensis
MGP_CAROLIEiJ_G0033239	Gspt2	100	97.310	ENSRNOG00000048817	Gspt2	100	97.310	Rattus_norvegicus
MGP_CAROLIEiJ_G0033239	Gspt2	99	87.700	ENSRBIG00000034444	GSPT2	100	86.950	Rhinopithecus_bieti
MGP_CAROLIEiJ_G0033239	Gspt2	99	87.719	ENSSBOG00000036422	GSPT2	100	87.284	Saimiri_boliviensis_boliviensis
MGP_CAROLIEiJ_G0033239	Gspt2	88	85.536	ENSSARG00000011841	GSPT2	100	85.536	Sorex_araneus
MGP_CAROLIEiJ_G0033239	Gspt2	97	88.728	ENSSSCG00000012317	GSPT2	96	88.406	Sus_scrofa
MGP_CAROLIEiJ_G0033239	Gspt2	99	89.314	ENSTTRG00000010721	GSPT2	100	88.715	Tursiops_truncatus
MGP_CAROLIEiJ_G0033239	Gspt2	99	88.836	ENSUAMG00000011563	GSPT2	100	88.245	Ursus_americanus
MGP_CAROLIEiJ_G0033239	Gspt2	79	94.990	ENSUMAG00000013348	GSPT2	100	94.589	Ursus_maritimus
MGP_CAROLIEiJ_G0033239	Gspt2	98	88.141	ENSVPAG00000003204	GSPT2	99	87.994	Vicugna_pacos
MGP_CAROLIEiJ_G0033239	Gspt2	97	88.245	ENSVVUG00000005605	GSPT2	100	87.923	Vulpes_vulpes