EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0033247 (Gene tree)
Gene ID: 110286825
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 12B
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Plus strand
Length: 182869 bases
Position: chrX:90302880-90485748
Accession: 110286825
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0092171	RNase_Zc3h12a	PF11977.8	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0092171	-	758	-	MGP_CAROLIEiJ_P0092171	53 (aa)	-	UPI0004620FEF
MGP_CAROLIEiJ_T0092170	-	6922	-	MGP_CAROLIEiJ_P0092170	114 (aa)	-	UPI00033353CD
MGP_CAROLIEiJ_T0092169	-	2839	-	MGP_CAROLIEiJ_P0092169	835 (aa)	XP_021009101	UPI000A317C66
MGP_CAROLIEiJ_T0092167	-	1916	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CAROLIEiJ_G0033247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0033247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CAROLIEiJ_G0033247	-	66	88.571	MGP_CAROLIEiJ_G0032210	Zc3h12c	92	51.655
MGP_CAROLIEiJ_G0033247	-	64	79.412	MGP_CAROLIEiJ_G0026462	Zc3h12a	51	66.993
MGP_CAROLIEiJ_G0033247	-	81	55.102	MGP_CAROLIEiJ_G0015104	Zc3h12d	56	60.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0033247	-	100	88.679	ENSCPOG00000030973	-	100	88.679	Cavia_porcellus
MGP_CAROLIEiJ_G0033247	-	100	94.340	ENSNGAG00000001158	-	100	94.340	Nannospalax_galili
MGP_CAROLIEiJ_G0033247	-	100	88.679	ENSODEG00000002977	-	100	88.679	Octodon_degus