EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: MGP_CAROLIEiJ_G0033333 (Gene tree)
Gene ID: 110287532
Gene Symbol: Rtl3
Alias: D430021I08Rik|Mar3|Mart3|ZHC5|Zcchc5
Full Name: retrotransposon Gag like 3
Gene Type: protein_coding
Species: Mus_caroli
Status: putative
Strand: Minus strand
Length: 3559 bases
Position: chrX:100847880-100851438
Accession: 110287532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CAROLIEiJ_P0092486	zf-CCHC	PF00098.23	0.0005	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CAROLIEiJ_T0092486	-	2946	XM_021154113	MGP_CAROLIEiJ_P0092486	550 (aa)	XP_021009772	UPI000A315A08

Gene Model

Click here to download MGP_CAROLIEiJ_G0033333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CAROLIEiJ_G0033333's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
MGP_CAROLIEiJ_G0033333	Rtl3	99	47.133	ENSG00000179300	RTL3	99	50.811	Homo_sapiens
MGP_CAROLIEiJ_G0033333	Rtl3	100	58.191	ENSTSYG00000008776	RTL3	100	58.191	Carlito_syrichta
MGP_CAROLIEiJ_G0033333	Rtl3	100	75.627	ENSCGRG00001015952	Rtl3	100	75.627	Cricetulus_griseus_chok1gshd
MGP_CAROLIEiJ_G0033333	Rtl3	100	58.676	ENSDORG00000029995	Rtl3	100	58.140	Dipodomys_ordii
MGP_CAROLIEiJ_G0033333	Rtl3	100	53.108	ENSECAG00000029496	RTL3	100	52.931	Equus_caballus
MGP_CAROLIEiJ_G0033333	Rtl3	100	56.743	ENSSTOG00000027152	RTL3	100	56.743	Ictidomys_tridecemlineatus
MGP_CAROLIEiJ_G0033333	Rtl3	100	54.116	ENSJJAG00000014790	-	100	53.415	Jaculus_jaculus
MGP_CAROLIEiJ_G0033333	Rtl3	100	73.297	ENSMAUG00000011823	Rtl3	100	73.297	Mesocricetus_auratus
MGP_CAROLIEiJ_G0033333	Rtl3	100	55.576	ENSMICG00000004901	RTL3	100	55.576	Microcebus_murinus
MGP_CAROLIEiJ_G0033333	Rtl3	100	73.084	ENSMOCG00000017247	Rtl3	100	73.084	Microtus_ochrogaster
MGP_CAROLIEiJ_G0033333	Rtl3	100	96.022	ENSMUSG00000047686	Rtl3	100	96.022	Mus_musculus
MGP_CAROLIEiJ_G0033333	Rtl3	100	92.405	MGP_PahariEiJ_G0031869	Rtl3	100	92.405	Mus_pahari
MGP_CAROLIEiJ_G0033333	Rtl3	100	95.841	MGP_SPRETEiJ_G0034497	Rtl3	100	95.841	Mus_spretus
MGP_CAROLIEiJ_G0033333	Rtl3	100	63.368	ENSNGAG00000002851	Rtl3	100	62.847	Nannospalax_galili
MGP_CAROLIEiJ_G0033333	Rtl3	100	58.824	ENSOCUG00000025689	RTL3	100	58.824	Oryctolagus_cuniculus
MGP_CAROLIEiJ_G0033333	Rtl3	100	57.092	ENSPCOG00000016711	RTL3	100	57.549	Propithecus_coquereli
MGP_CAROLIEiJ_G0033333	Rtl3	100	86.871	ENSRNOG00000002429	Rtl3	100	86.871	Rattus_norvegicus
MGP_CAROLIEiJ_G0033333	Rtl3	76	54.545	ENSTBEG00000002464	RTL3	87	54.312	Tupaia_belangeri