EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015250 (Gene tree)
Gene ID: -
Gene Symbol: Khdrbs2
Alias: 6330586C16Rik|SLM-1|Slim1|Slm1
Full Name: KH domain containing%2C RNA binding%2C signal transduction associated 2
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 501435 bases
Position: chr1:30169391-30670825
Accession: 2159649
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0018440	KH_1	PF00013.29	5.8e-09	1	1
MGP_CASTEiJ_P0018442	KH_1	PF00013.29	6.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0018440	-	2281	-	MGP_CASTEiJ_P0018440	349 (aa)	-	Q9WU01
MGP_CASTEiJ_T0018441	-	3265	-	MGP_CASTEiJ_P0018441	91 (aa)	-	-
MGP_CASTEiJ_T0018442	-	5296	-	MGP_CASTEiJ_P0018442	193 (aa)	-	-
MGP_CASTEiJ_T0018443	-	543	-	MGP_CASTEiJ_P0018443	92 (aa)	-	-
MGP_CASTEiJ_T0018444	-	275	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0015250's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015250's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015250	Khdrbs2	99	59.669	MGP_CASTEiJ_G0027966	Khdrbs1	99	61.473
MGP_CASTEiJ_G0015250	Khdrbs2	99	66.479	MGP_CASTEiJ_G0021171	Khdrbs3	99	64.387
MGP_CASTEiJ_G0015250	Khdrbs2	64	37.395	MGP_CASTEiJ_G0022385	Qk	58	41.053