EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015254 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 23403 bases
Position: chr1:31724640-31748042
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0018451	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_CASTEiJ_P0018455	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0018449	-	444	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018458	-	1750	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018453	-	2047	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018452	-	4374	-	MGP_CASTEiJ_P0018452	64 (aa)	-	-
MGP_CASTEiJ_T0018451	-	4298	-	MGP_CASTEiJ_P0018451	237 (aa)	-	-
MGP_CASTEiJ_T0018450	-	2557	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018457	-	437	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018456	-	1944	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018455	-	4194	-	MGP_CASTEiJ_P0018455	237 (aa)	-	-
MGP_CASTEiJ_T0018454	-	1086	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0015254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015254	Rab23	64	38.462	MGP_CASTEiJ_G0018075	Rab34	60	38.462
MGP_CASTEiJ_G0015254	Rab23	77	38.172	MGP_CASTEiJ_G0016681	Rab36	69	38.172
MGP_CASTEiJ_G0015254	Rab23	65	36.129	MGP_CASTEiJ_G0028465	Rheb	84	36.129
MGP_CASTEiJ_G0015254	Rab23	61	31.507	MGP_CASTEiJ_G0032241	Hras	98	30.332
MGP_CASTEiJ_G0015254	Rab23	83	32.487	MGP_CASTEiJ_G0027193	Rab2a	95	31.863
MGP_CASTEiJ_G0015254	Rab23	67	31.765	MGP_CASTEiJ_G0029478	Rasl11a	69	31.765
MGP_CASTEiJ_G0015254	Rab23	67	38.125	MGP_CASTEiJ_G0023094	Rab5a	74	38.125
MGP_CASTEiJ_G0015254	Rab23	67	37.500	MGP_CASTEiJ_G0017200	Rab5b	74	37.500
MGP_CASTEiJ_G0015254	Rab23	75	34.831	MGP_CASTEiJ_G0029079	Rab35	95	33.684
MGP_CASTEiJ_G0015254	Rab23	80	32.984	MGP_CASTEiJ_G0033947	Rab11a	92	34.752
MGP_CASTEiJ_G0015254	Rab23	70	33.918	MGP_CASTEiJ_G0030093	Rab7	94	43.478
MGP_CASTEiJ_G0015254	Rab23	74	35.227	MGP_CASTEiJ_G0018472	Rab5c	81	35.227
MGP_CASTEiJ_G0015254	Rab23	72	34.682	MGP_CASTEiJ_G0019160	Rab15	81	34.682
MGP_CASTEiJ_G0015254	Rab23	70	34.337	MGP_CASTEiJ_G0023899	Rab1b	83	34.337
MGP_CASTEiJ_G0015254	Rab23	65	31.410	MGP_CASTEiJ_G0030551	Kras	94	32.778
MGP_CASTEiJ_G0015254	Rab23	61	32.192	MGP_CASTEiJ_G0026847	Nras	95	35.862
MGP_CASTEiJ_G0015254	Rab23	70	34.337	MGP_CASTEiJ_G0024846	Rab14	88	35.338
MGP_CASTEiJ_G0015254	Rab23	80	30.890	MGP_CASTEiJ_G0023184	Rab31	93	30.890
MGP_CASTEiJ_G0015254	Rab23	85	31.683	MGP_CASTEiJ_G0026561	Rab25	92	31.683
MGP_CASTEiJ_G0015254	Rab23	86	32.850	MGP_CASTEiJ_G0020554	Rab2b	94	32.850
MGP_CASTEiJ_G0015254	Rab23	72	35.465	MGP_CASTEiJ_G0023338	Rab18	83	35.465
MGP_CASTEiJ_G0015254	Rab23	65	34.375	MGP_CASTEiJ_G0035224	Rab9	79	34.375
MGP_CASTEiJ_G0015254	Rab23	75	32.086	MGP_CASTEiJ_G0028739	Rasl11b	78	32.086
MGP_CASTEiJ_G0015254	Rab23	66	41.139	MGP_CASTEiJ_G0034188	Rab6b	76	41.139
MGP_CASTEiJ_G0015254	Rab23	69	35.119	MGP_CASTEiJ_G0023193	Rab12	57	35.119
MGP_CASTEiJ_G0015254	Rab23	74	37.500	MGP_CASTEiJ_G0031541	Rab30	87	37.500
MGP_CASTEiJ_G0015254	Rab23	65	36.538	MGP_CASTEiJ_G0034827	Rab39b	73	36.538
MGP_CASTEiJ_G0015254	Rab23	65	33.766	MGP_CASTEiJ_G0026136	Rab22a	79	33.766
MGP_CASTEiJ_G0015254	Rab23	67	35.152	MGP_CASTEiJ_G0026366	Rab33b	72	35.152
MGP_CASTEiJ_G0015254	Rab23	66	37.654	MGP_CASTEiJ_G0035073	Rab9b	80	37.654
MGP_CASTEiJ_G0015254	Rab23	75	32.961	MGP_CASTEiJ_G0018675	Rab37	81	32.961
MGP_CASTEiJ_G0015254	Rab23	77	31.383	MGP_CASTEiJ_G0034658	Rab33a	79	31.383
MGP_CASTEiJ_G0015254	Rab23	80	33.508	MGP_CASTEiJ_G0022763	Rab11b	88	33.508
MGP_CASTEiJ_G0015254	Rab23	70	34.337	MGP_CASTEiJ_G0017380	Rab1a	81	34.337