EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_CASTEiJ_G0015302 (Gene tree)
Gene ID: -
Gene Symbol: Aff3
Alias: 3222402O04Rik|A730046J16|LAF-4|Laf4
Full Name: AF4/FMR2 family%2C member 3
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Minus strand
Length: 520618 bases
Position: chr1:36411384-36932001
Accession: 106927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0018743	AF-4	PF05110.13	0	1	2
MGP_CASTEiJ_P0018743	AF-4	PF05110.13	0	2	2
MGP_CASTEiJ_P0018744	AF-4	PF05110.13	0	1	2
MGP_CASTEiJ_P0018744	AF-4	PF05110.13	0	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0018743	-	5857	-	MGP_CASTEiJ_P0018743	1229 (aa)	-	-
MGP_CASTEiJ_T0018742	-	9183	XM_006495737	MGP_CASTEiJ_P0018742	1254 (aa)	XP_006495800	D3YYI6
MGP_CASTEiJ_T0018747	-	666	-	MGP_CASTEiJ_P0018747	53 (aa)	-	-
MGP_CASTEiJ_T0018746	-	1647	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018745	-	761	-	-	- (aa)	-	-
MGP_CASTEiJ_T0018744	-	6011	-	MGP_CASTEiJ_P0018744	1228 (aa)	-	-

Gene Model

Click here to download MGP_CASTEiJ_G0015302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_CASTEiJ_G0015302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015302	Aff3	89	60.000	MGP_CASTEiJ_G0034739	Aff2	84	57.037
MGP_CASTEiJ_G0015302	Aff3	86	35.163	MGP_CASTEiJ_G0017605	Aff4	74	57.143