EuRBPDB

Description

Ensembl ID: MGP_CASTEiJ_G0015499 (Gene tree)
Gene ID: -
Gene Symbol: Pnkd
Alias: 2210013N15Rik|2810403H05Rik|AI854243|Brp17|Kiaa1184|MNCb-5687|MR-1|Mr1|Tahccp2
Full Name: paroxysmal nonkinesiogenic dyskinesia
Gene Type: protein_coding
Species: Mus_musculus_casteij
Status: putative
Strand: Plus strand
Length: 78954 bases
Position: chr1:73905414-73984367
Accession: 1930773
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_CASTEiJ_P0019761	Lactamase_B	PF00753.27	2.6e-10	1	1
MGP_CASTEiJ_P0019749	Lactamase_B	PF00753.27	2.9e-10	1	1
MGP_CASTEiJ_P0019752	Lactamase_B	PF00753.27	3.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_CASTEiJ_T0019748	-	740	XM_006496167	MGP_CASTEiJ_P0019748	142 (aa)	XP_006496230	Q69ZP3
MGP_CASTEiJ_T0019749	-	2932	-	MGP_CASTEiJ_P0019749	385 (aa)	-	-
MGP_CASTEiJ_T0019753	-	443	-	-	- (aa)	-	-
MGP_CASTEiJ_T0019752	-	3049	-	MGP_CASTEiJ_P0019752	424 (aa)	-	-
MGP_CASTEiJ_T0019751	-	433	-	-	- (aa)	-	-
MGP_CASTEiJ_T0019750	-	882	-	-	- (aa)	-	-
MGP_CASTEiJ_T0019762	-	3567	-	-	- (aa)	-	-
MGP_CASTEiJ_T0019761	-	2854	-	MGP_CASTEiJ_P0019761	360 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_CASTEiJ_G0015499	Pnkd	74	40.977	MGP_CASTEiJ_G0022552	Hagh	96	44.099
MGP_CASTEiJ_G0015499	Pnkd	63	42.105	MGP_CASTEiJ_G0022592	Haghl	100	40.351